Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 RNU2-32P-201ENST00000411193 191 ntBASIC2.73□□□□□ -1.97
COL20A1Q9P218 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.73□□□□□ -1.97
COL20A1Q9P218 AC004386.2-201ENST00000441858 148 ntBASIC2.73□□□□□ -1.97
COL20A1Q9P218 RPS23P5-201ENST00000495419 428 ntBASIC2.73□□□□□ -1.97
COL20A1Q9P218 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.73□□□□□ -1.97
COL20A1Q9P218 RNU2-44P-201ENST00000516795 194 ntBASIC2.73□□□□□ -1.97
COL20A1Q9P218 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC2.73□□□□□ -1.97
COL20A1Q9P218 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.73□□□□□ -1.97
COL20A1Q9P218 AC022616.8-201ENST00000533569 253 ntBASIC2.73□□□□□ -1.97
COL20A1Q9P218 AP002770.2-201ENST00000543613 532 ntBASIC2.73□□□□□ -1.97
COL20A1Q9P218 AC093023.1-201ENST00000547375 507 ntBASIC2.73□□□□□ -1.97
COL20A1Q9P218 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.73□□□□□ -1.97
COL20A1Q9P218 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.73□□□□□ -1.97
COL20A1Q9P218 MIR5006-201ENST00000583027 110 ntBASIC2.73□□□□□ -1.97
COL20A1Q9P218 U4atac.1-201ENST00000618345 95 ntBASIC2.73□□□□□ -1.97
COL20A1Q9P218 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.73□□□□□ -1.97
COL20A1Q9P218 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
COL20A1Q9P218 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
COL20A1Q9P218 AC091812.1-201ENST00000432235 1948 ntBASIC2.72□□□□□ -1.97
COL20A1Q9P218 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
COL20A1Q9P218 Y_RNA.179-201ENST00000363844 90 ntBASIC2.72□□□□□ -1.97
COL20A1Q9P218 SNORA63C-201ENST00000364578 129 ntBASIC2.72□□□□□ -1.97
COL20A1Q9P218 RNA5SP125-201ENST00000364843 120 ntBASIC2.72□□□□□ -1.97
COL20A1Q9P218 SNORA18.2-201ENST00000383865 132 ntBASIC2.72□□□□□ -1.97
COL20A1Q9P218 RNA5SP213-201ENST00000391031 106 ntBASIC2.72□□□□□ -1.97
COL20A1Q9P218 snosnR66.1-201ENST00000391095 99 ntBASIC2.72□□□□□ -1.97
COL20A1Q9P218 RNU6-101P-201ENST00000410323 104 ntBASIC2.72□□□□□ -1.97
COL20A1Q9P218 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.72□□□□□ -1.97
COL20A1Q9P218 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.72□□□□□ -1.97
COL20A1Q9P218 AC009237.7-201ENST00000447357 229 ntBASIC2.72□□□□□ -1.97
COL20A1Q9P218 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.72□□□□□ -1.97
COL20A1Q9P218 MTCO3P8-201ENST00000453691 755 ntBASIC2.72□□□□□ -1.97
COL20A1Q9P218 RPS27AP9-201ENST00000477681 438 ntBASIC2.72□□□□□ -1.97
COL20A1Q9P218 RNA5SP281-201ENST00000516504 135 ntBASIC2.72□□□□□ -1.97
COL20A1Q9P218 RNU5F-4P-201ENST00000516581 114 ntBASIC2.72□□□□□ -1.97
COL20A1Q9P218 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.72□□□□□ -1.97
COL20A1Q9P218 AC022616.4-201ENST00000522985 181 ntBASIC2.72□□□□□ -1.97
COL20A1Q9P218 MIR4680-201ENST00000580906 66 ntBASIC2.72□□□□□ -1.97
COL20A1Q9P218 AC005034.5-201ENST00000604219 466 ntBASIC2.72□□□□□ -1.97
COL20A1Q9P218 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
COL20A1Q9P218 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
COL20A1Q9P218 MTND5P6-201ENST00000422338 1798 ntBASIC2.72□□□□□ -1.97
COL20A1Q9P218 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.97
COL20A1Q9P218 MTND4P1-201ENST00000457501 1466 ntBASIC2.71□□□□□ -1.97
COL20A1Q9P218 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.97
COL20A1Q9P218 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
COL20A1Q9P218 RNU6-1301P-201ENST00000362724 104 ntBASIC2.71□□□□□ -1.98
COL20A1Q9P218 Y_RNA.145-201ENST00000363527 102 ntBASIC2.71□□□□□ -1.98
COL20A1Q9P218 RNU4-50P-201ENST00000364361 141 ntBASIC2.71□□□□□ -1.98
COL20A1Q9P218 Y_RNA.389-201ENST00000383924 113 ntBASIC2.71□□□□□ -1.98
COL20A1Q9P218 SNORA70B-201ENST00000384210 135 ntBASIC2.71□□□□□ -1.98
COL20A1Q9P218 Y_RNA.485-201ENST00000384395 102 ntBASIC2.71□□□□□ -1.98
COL20A1Q9P218 MIR1261-201ENST00000408659 82 ntBASIC2.71□□□□□ -1.98
COL20A1Q9P218 U8.22-201ENST00000459141 133 ntBASIC2.71□□□□□ -1.98
COL20A1Q9P218 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.71□□□□□ -1.98
COL20A1Q9P218 RNU6-344P-201ENST00000516635 111 ntBASIC2.71□□□□□ -1.98
COL20A1Q9P218 RN7SKP49-201ENST00000516675 260 ntBASIC2.71□□□□□ -1.98
COL20A1Q9P218 HSPE1P20-201ENST00000538133 289 ntBASIC2.71□□□□□ -1.98
COL20A1Q9P218 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.71□□□□□ -1.98
COL20A1Q9P218 AL360085.1-201ENST00000604713 532 ntBASIC2.71□□□□□ -1.98
COL20A1Q9P218 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.71□□□□□ -1.98
COL20A1Q9P218 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
COL20A1Q9P218 ZNF72P-201ENST00000425869 1908 ntBASIC2.71□□□□□ -1.98
COL20A1Q9P218 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
COL20A1Q9P218 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
COL20A1Q9P218 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.7□□□□□ -1.98
COL20A1Q9P218 RNU1-76P-201ENST00000362903 159 ntBASIC2.7□□□□□ -1.98
COL20A1Q9P218 RNU6-234P-201ENST00000365229 104 ntBASIC2.7□□□□□ -1.98
COL20A1Q9P218 SNORA63.7-201ENST00000365579 123 ntBASIC2.7□□□□□ -1.98
COL20A1Q9P218 RNU6-793P-201ENST00000384233 104 ntBASIC2.7□□□□□ -1.98
COL20A1Q9P218 MIR592-201ENST00000384959 97 ntBASIC2.7□□□□□ -1.98
COL20A1Q9P218 MIR549A-201ENST00000385268 96 ntBASIC2.7□□□□□ -1.98
COL20A1Q9P218 Y_RNA.595-201ENST00000410403 105 ntBASIC2.7□□□□□ -1.98
COL20A1Q9P218 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.7□□□□□ -1.98
COL20A1Q9P218 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.7□□□□□ -1.98
COL20A1Q9P218 RNU6-327P-201ENST00000516270 127 ntBASIC2.7□□□□□ -1.98
COL20A1Q9P218 RNU6-1045P-201ENST00000516321 107 ntBASIC2.7□□□□□ -1.98
COL20A1Q9P218 Y_RNA.683-201ENST00000516508 93 ntBASIC2.7□□□□□ -1.98
COL20A1Q9P218 RPPH1-2P-201ENST00000516688 293 ntBASIC2.7□□□□□ -1.98
COL20A1Q9P218 AC040926.1-201ENST00000530195 238 ntBASIC2.7□□□□□ -1.98
COL20A1Q9P218 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.7□□□□□ -1.98
COL20A1Q9P218 AL162373.1-201ENST00000620433 407 ntBASIC2.7□□□□□ -1.98
COL20A1Q9P218 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
COL20A1Q9P218 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.7□□□□□ -1.98
COL20A1Q9P218 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
COL20A1Q9P218 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
COL20A1Q9P218 SNORA51.11-201ENST00000384442 131 ntBASIC2.69□□□□□ -1.98
COL20A1Q9P218 RNU6-1026P-201ENST00000384465 108 ntBASIC2.69□□□□□ -1.98
COL20A1Q9P218 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
COL20A1Q9P218 SNORD78.2-201ENST00000391076 69 ntBASIC2.69□□□□□ -1.98
COL20A1Q9P218 Y_RNA.645-201ENST00000391229 102 ntBASIC2.69□□□□□ -1.98
COL20A1Q9P218 RNU6-985P-201ENST00000410182 104 ntBASIC2.69□□□□□ -1.98
COL20A1Q9P218 RN7SKP223-201ENST00000410582 62 ntBASIC2.69□□□□□ -1.98
COL20A1Q9P218 RNA5SP492-201ENST00000411330 114 ntBASIC2.69□□□□□ -1.98
COL20A1Q9P218 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.69□□□□□ -1.98
COL20A1Q9P218 MTND2P23-201ENST00000422990 651 ntBASIC2.69□□□□□ -1.98
COL20A1Q9P218 AL445305.1-201ENST00000432577 575 ntBASIC2.69□□□□□ -1.98
COL20A1Q9P218 AC018634.1-201ENST00000437554 401 ntBASIC2.69□□□□□ -1.98
COL20A1Q9P218 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.69□□□□□ -1.98
COL20A1Q9P218 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 121.3 ms