Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 AC098479.1-201ENST00000609225 154 ntBASIC3.01□□□□□ -1.93
KCMF1Q9P0J7 uc_338.25-201ENST00000613756 156 ntBASIC3.01□□□□□ -1.93
KCMF1Q9P0J7 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.01□□□□□ -1.93
KCMF1Q9P0J7 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
KCMF1Q9P0J7 MIR29B2-201ENST00000385055 81 ntBASIC3□□□□□ -1.93
KCMF1Q9P0J7 RNU2-61P-201ENST00000411069 191 ntBASIC3□□□□□ -1.93
KCMF1Q9P0J7 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3□□□□□ -1.93
KCMF1Q9P0J7 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3□□□□□ -1.93
KCMF1Q9P0J7 RPS29P26-201ENST00000477483 171 ntBASIC3□□□□□ -1.93
KCMF1Q9P0J7 SNORD116-28-201ENST00000516123 91 ntBASIC3□□□□□ -1.93
KCMF1Q9P0J7 SNORA27.4-201ENST00000516650 95 ntBASIC3□□□□□ -1.93
KCMF1Q9P0J7 SCARNA11.3-201ENST00000517276 130 ntBASIC3□□□□□ -1.93
KCMF1Q9P0J7 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3□□□□□ -1.93
KCMF1Q9P0J7 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3□□□□□ -1.93
KCMF1Q9P0J7 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3□□□□□ -1.93
KCMF1Q9P0J7 MIR7515-201ENST00000637837 67 ntBASIC3□□□□□ -1.93
KCMF1Q9P0J7 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3□□□□□ -1.93
KCMF1Q9P0J7 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
KCMF1Q9P0J7 AC008264.2-201ENST00000610193 3731 ntBASIC2.99□□□□□ -1.93
KCMF1Q9P0J7 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
KCMF1Q9P0J7 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.99□□□□□ -1.93
KCMF1Q9P0J7 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.99□□□□□ -1.93
KCMF1Q9P0J7 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.99□□□□□ -1.93
KCMF1Q9P0J7 RNA5SP383-201ENST00000362934 120 ntBASIC2.99□□□□□ -1.93
KCMF1Q9P0J7 RNU4-80P-201ENST00000363200 141 ntBASIC2.99□□□□□ -1.93
KCMF1Q9P0J7 SNORD32B-201ENST00000364460 84 ntBASIC2.99□□□□□ -1.93
KCMF1Q9P0J7 SNORA7.4-201ENST00000384249 137 ntBASIC2.99□□□□□ -1.93
KCMF1Q9P0J7 RNU6-662P-201ENST00000384253 104 ntBASIC2.99□□□□□ -1.93
KCMF1Q9P0J7 MIR218-1-201ENST00000384999 110 ntBASIC2.99□□□□□ -1.93
KCMF1Q9P0J7 AC009963.1-201ENST00000417265 157 ntBASIC2.99□□□□□ -1.93
KCMF1Q9P0J7 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.99□□□□□ -1.93
KCMF1Q9P0J7 MIR449C-201ENST00000516047 92 ntBASIC2.99□□□□□ -1.93
KCMF1Q9P0J7 DEFB117-201ENST00000602356 141 ntBASIC2.99□□□□□ -1.93
KCMF1Q9P0J7 AC006380.1-201ENST00000603598 186 ntBASIC2.99□□□□□ -1.93
KCMF1Q9P0J7 MIR8057-201ENST00000620957 69 ntBASIC2.99□□□□□ -1.93
KCMF1Q9P0J7 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.99□□□□□ -1.93
KCMF1Q9P0J7 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
KCMF1Q9P0J7 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
KCMF1Q9P0J7 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.99□□□□□ -1.93
KCMF1Q9P0J7 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.98□□□□□ -1.93
KCMF1Q9P0J7 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
KCMF1Q9P0J7 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.98□□□□□ -1.93
KCMF1Q9P0J7 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
KCMF1Q9P0J7 Y_RNA.122-201ENST00000363331 96 ntBASIC2.98□□□□□ -1.93
KCMF1Q9P0J7 RNU6-525P-201ENST00000363685 104 ntBASIC2.98□□□□□ -1.93
KCMF1Q9P0J7 RNU6-454P-201ENST00000364292 107 ntBASIC2.98□□□□□ -1.93
KCMF1Q9P0J7 Y_RNA.292-201ENST00000364904 97 ntBASIC2.98□□□□□ -1.93
KCMF1Q9P0J7 DYNLT3P1-201ENST00000378574 347 ntBASIC2.98□□□□□ -1.93
KCMF1Q9P0J7 RNU6-1289P-201ENST00000384431 106 ntBASIC2.98□□□□□ -1.93
KCMF1Q9P0J7 RNU6-1328P-201ENST00000410938 106 ntBASIC2.98□□□□□ -1.93
KCMF1Q9P0J7 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.98□□□□□ -1.93
KCMF1Q9P0J7 NDUFB4P10-201ENST00000452541 359 ntBASIC2.98□□□□□ -1.93
KCMF1Q9P0J7 AL138752.1-201ENST00000452964 351 ntBASIC2.98□□□□□ -1.93
KCMF1Q9P0J7 RN7SL863P-201ENST00000462370 296 ntBASIC2.98□□□□□ -1.93
KCMF1Q9P0J7 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.98□□□□□ -1.93
KCMF1Q9P0J7 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.98□□□□□ -1.93
KCMF1Q9P0J7 AC245166.1-201ENST00000521012 253 ntBASIC2.98□□□□□ -1.93
KCMF1Q9P0J7 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.98□□□□□ -1.93
KCMF1Q9P0J7 MIR5004-201ENST00000579078 107 ntBASIC2.98□□□□□ -1.93
KCMF1Q9P0J7 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.98□□□□□ -1.93
KCMF1Q9P0J7 AC004792.1-201ENST00000614523 137 ntBASIC2.98□□□□□ -1.93
KCMF1Q9P0J7 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
KCMF1Q9P0J7 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
KCMF1Q9P0J7 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.97□□□□□ -1.93
KCMF1Q9P0J7 AC093831.2-201ENST00000624393 3427 ntBASIC2.97□□□□□ -1.93
KCMF1Q9P0J7 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.97□□□□□ -1.93
KCMF1Q9P0J7 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.97□□□□□ -1.93
KCMF1Q9P0J7 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
KCMF1Q9P0J7 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
KCMF1Q9P0J7 UBE2WP1-201ENST00000362030 340 ntBASIC2.97□□□□□ -1.93
KCMF1Q9P0J7 RNA5SP374-201ENST00000362939 125 ntBASIC2.97□□□□□ -1.93
KCMF1Q9P0J7 RNU6-324P-201ENST00000363957 106 ntBASIC2.97□□□□□ -1.93
KCMF1Q9P0J7 RNU6-1274P-201ENST00000384557 107 ntBASIC2.97□□□□□ -1.93
KCMF1Q9P0J7 RPL21P3-201ENST00000395517 478 ntBASIC2.97□□□□□ -1.93
KCMF1Q9P0J7 Y_RNA.793-201ENST00000411222 111 ntBASIC2.97□□□□□ -1.93
KCMF1Q9P0J7 RPL30P4-201ENST00000429309 333 ntBASIC2.97□□□□□ -1.93
KCMF1Q9P0J7 RPS29P12-201ENST00000460178 152 ntBASIC2.97□□□□□ -1.93
KCMF1Q9P0J7 RNA5SP217-201ENST00000515959 91 ntBASIC2.97□□□□□ -1.93
KCMF1Q9P0J7 RNU5F-4P-201ENST00000516581 114 ntBASIC2.97□□□□□ -1.93
KCMF1Q9P0J7 RNU6-1098P-201ENST00000516772 96 ntBASIC2.97□□□□□ -1.93
KCMF1Q9P0J7 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.97□□□□□ -1.93
KCMF1Q9P0J7 AC024405.2-202ENST00000532731 184 ntBASIC2.97□□□□□ -1.93
KCMF1Q9P0J7 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.97□□□□□ -1.93
KCMF1Q9P0J7 AC023043.3-201ENST00000593113 385 ntBASIC2.97□□□□□ -1.93
KCMF1Q9P0J7 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
KCMF1Q9P0J7 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
KCMF1Q9P0J7 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
KCMF1Q9P0J7 FAM35CP-201ENST00000554755 2470 ntBASIC2.96□□□□□ -1.94
KCMF1Q9P0J7 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
KCMF1Q9P0J7 MIR411-201ENST00000362239 96 ntBASIC2.96□□□□□ -1.94
KCMF1Q9P0J7 RNU6-1305P-201ENST00000364353 104 ntBASIC2.96□□□□□ -1.94
KCMF1Q9P0J7 Y_RNA.329-201ENST00000365209 107 ntBASIC2.96□□□□□ -1.94
KCMF1Q9P0J7 SNORA67.2-201ENST00000384300 149 ntBASIC2.96□□□□□ -1.94
KCMF1Q9P0J7 RNU4-70P-201ENST00000384579 139 ntBASIC2.96□□□□□ -1.94
KCMF1Q9P0J7 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
KCMF1Q9P0J7 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.96□□□□□ -1.94
KCMF1Q9P0J7 Y_RNA.626-201ENST00000411288 95 ntBASIC2.96□□□□□ -1.94
KCMF1Q9P0J7 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.96□□□□□ -1.94
KCMF1Q9P0J7 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.96□□□□□ -1.94
KCMF1Q9P0J7 RPS12P18-201ENST00000442381 270 ntBASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms