Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
GCM1Q9NP62 RNU4-15P-201ENST00000362613 141 ntBASIC3.18□□□□□ -1.9
GCM1Q9NP62 RNU6-529P-201ENST00000363383 104 ntBASIC3.18□□□□□ -1.9
GCM1Q9NP62 RNU6-1082P-201ENST00000364574 107 ntBASIC3.18□□□□□ -1.9
GCM1Q9NP62 SNORA18.2-201ENST00000383865 132 ntBASIC3.18□□□□□ -1.9
GCM1Q9NP62 SNORA67.2-201ENST00000384300 149 ntBASIC3.18□□□□□ -1.9
GCM1Q9NP62 MIR134-201ENST00000385258 73 ntBASIC3.18□□□□□ -1.9
GCM1Q9NP62 AL139247.1-201ENST00000422768 325 ntBASIC3.18□□□□□ -1.9
GCM1Q9NP62 ARF4P2-201ENST00000430209 526 ntBASIC3.18□□□□□ -1.9
GCM1Q9NP62 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC3.18□□□□□ -1.9
GCM1Q9NP62 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC3.18□□□□□ -1.9
GCM1Q9NP62 snoU13.14-201ENST00000459372 104 ntBASIC3.18□□□□□ -1.9
GCM1Q9NP62 AL133162.1-201ENST00000463228 453 ntBASIC3.18□□□□□ -1.9
GCM1Q9NP62 RNU6-772P-201ENST00000516042 105 ntBASIC3.18□□□□□ -1.9
GCM1Q9NP62 RNA5SP208-201ENST00000516156 78 ntBASIC3.18□□□□□ -1.9
GCM1Q9NP62 MIR1254-2-201ENST00000579553 63 ntBASIC3.18□□□□□ -1.9
GCM1Q9NP62 MIR3121-201ENST00000579680 77 ntBASIC3.18□□□□□ -1.9
GCM1Q9NP62 RPS15AP11-201ENST00000594193 385 ntBASIC3.18□□□□□ -1.9
GCM1Q9NP62 TNPO1P3-201ENST00000436471 2662 ntBASIC3.18□□□□□ -1.9
GCM1Q9NP62 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
GCM1Q9NP62 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
GCM1Q9NP62 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
GCM1Q9NP62 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.18□□□□□ -1.9
GCM1Q9NP62 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
GCM1Q9NP62 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
GCM1Q9NP62 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
GCM1Q9NP62 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
GCM1Q9NP62 AL513302.2-201ENST00000562313 1842 ntBASIC3.17□□□□□ -1.9
GCM1Q9NP62 RNU6-1010P-201ENST00000362757 107 ntBASIC3.17□□□□□ -1.9
GCM1Q9NP62 Y_RNA.294-201ENST00000364916 102 ntBASIC3.17□□□□□ -1.9
GCM1Q9NP62 U8.7-201ENST00000364940 136 ntBASIC3.17□□□□□ -1.9
GCM1Q9NP62 RNU6-198P-201ENST00000384258 104 ntBASIC3.17□□□□□ -1.9
GCM1Q9NP62 RNU6-748P-201ENST00000384648 107 ntBASIC3.17□□□□□ -1.9
GCM1Q9NP62 RNU6-19P-201ENST00000384718 107 ntBASIC3.17□□□□□ -1.9
GCM1Q9NP62 MIR554-201ENST00000384874 96 ntBASIC3.17□□□□□ -1.9
GCM1Q9NP62 RNA5SP424-201ENST00000390988 115 ntBASIC3.17□□□□□ -1.9
GCM1Q9NP62 SNORA79-201ENST00000408376 140 ntBASIC3.17□□□□□ -1.9
GCM1Q9NP62 RNU6ATAC-201ENST00000408749 126 ntBASIC3.17□□□□□ -1.9
GCM1Q9NP62 SNORA36B-201ENST00000410438 131 ntBASIC3.17□□□□□ -1.9
GCM1Q9NP62 AL445584.1-201ENST00000431451 330 ntBASIC3.17□□□□□ -1.9
GCM1Q9NP62 AC245047.4-201ENST00000433189 144 ntBASIC3.17□□□□□ -1.9
GCM1Q9NP62 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.17□□□□□ -1.9
GCM1Q9NP62 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.17□□□□□ -1.9
GCM1Q9NP62 TRBV12-2-201ENST00000489763 344 ntBASIC3.17□□□□□ -1.9
GCM1Q9NP62 AC117454.1-201ENST00000491120 168 ntBASIC3.17□□□□□ -1.9
GCM1Q9NP62 SNORD59.2-201ENST00000516873 68 ntBASIC3.17□□□□□ -1.9
GCM1Q9NP62 RNU1-45P-201ENST00000517191 141 ntBASIC3.17□□□□□ -1.9
GCM1Q9NP62 MIR3186-201ENST00000577404 85 ntBASIC3.17□□□□□ -1.9
GCM1Q9NP62 MIR378D2-201ENST00000580636 98 ntBASIC3.17□□□□□ -1.9
GCM1Q9NP62 AC120024.3-201ENST00000603167 156 ntBASIC3.17□□□□□ -1.9
GCM1Q9NP62 MIR548AY-201ENST00000617669 107 ntBASIC3.17□□□□□ -1.9
GCM1Q9NP62 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
GCM1Q9NP62 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
GCM1Q9NP62 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
GCM1Q9NP62 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
GCM1Q9NP62 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
GCM1Q9NP62 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.16□□□□□ -1.9
GCM1Q9NP62 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
GCM1Q9NP62 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
GCM1Q9NP62 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.16□□□□□ -1.9
GCM1Q9NP62 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.16□□□□□ -1.9
GCM1Q9NP62 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.16□□□□□ -1.9
GCM1Q9NP62 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
GCM1Q9NP62 SNORD114-7-201ENST00000362520 77 ntBASIC3.16□□□□□ -1.9
GCM1Q9NP62 Y_RNA.40-201ENST00000362645 93 ntBASIC3.16□□□□□ -1.9
GCM1Q9NP62 SNORD45.3-201ENST00000363836 72 ntBASIC3.16□□□□□ -1.9
GCM1Q9NP62 U8.11-201ENST00000384699 133 ntBASIC3.16□□□□□ -1.9
GCM1Q9NP62 AL133475.1-201ENST00000404414 305 ntBASIC3.16□□□□□ -1.9
GCM1Q9NP62 Y_RNA.622-201ENST00000411091 108 ntBASIC3.16□□□□□ -1.9
GCM1Q9NP62 RHEBP3-201ENST00000411920 351 ntBASIC3.16□□□□□ -1.9
GCM1Q9NP62 AC063976.4-201ENST00000421971 163 ntBASIC3.16□□□□□ -1.9
GCM1Q9NP62 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.16□□□□□ -1.9
GCM1Q9NP62 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.16□□□□□ -1.9
GCM1Q9NP62 AL441985.1-201ENST00000457727 251 ntBASIC3.16□□□□□ -1.9
GCM1Q9NP62 RPS4XP2-201ENST00000458402 793 ntBASIC3.16□□□□□ -1.9
GCM1Q9NP62 U8.18-201ENST00000459285 133 ntBASIC3.16□□□□□ -1.9
GCM1Q9NP62 RN7SL542P-201ENST00000467147 294 ntBASIC3.16□□□□□ -1.9
GCM1Q9NP62 AC145146.1-201ENST00000496370 254 ntBASIC3.16□□□□□ -1.9
GCM1Q9NP62 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.16□□□□□ -1.9
GCM1Q9NP62 RNU7-115P-201ENST00000516433 55 ntBASIC3.16□□□□□ -1.9
GCM1Q9NP62 Y_RNA.692-201ENST00000516627 105 ntBASIC3.16□□□□□ -1.9
GCM1Q9NP62 SNORD19.2-201ENST00000516978 73 ntBASIC3.16□□□□□ -1.9
GCM1Q9NP62 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.16□□□□□ -1.9
GCM1Q9NP62 AC034105.4-201ENST00000568304 277 ntBASIC3.16□□□□□ -1.9
GCM1Q9NP62 HMGN2P15-201ENST00000585707 270 ntBASIC3.16□□□□□ -1.9
GCM1Q9NP62 RNU1-30P-201ENST00000606575 163 ntBASIC3.16□□□□□ -1.9
GCM1Q9NP62 U7.8-201ENST00000619968 63 ntBASIC3.16□□□□□ -1.9
GCM1Q9NP62 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.16□□□□□ -1.9
GCM1Q9NP62 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.16□□□□□ -1.9
GCM1Q9NP62 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
GCM1Q9NP62 SNORD114-19-201ENST00000363072 75 ntBASIC3.15□□□□□ -1.91
GCM1Q9NP62 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
GCM1Q9NP62 MIR548B-201ENST00000385247 97 ntBASIC3.15□□□□□ -1.91
GCM1Q9NP62 SNORA40.5-201ENST00000391061 128 ntBASIC3.15□□□□□ -1.91
GCM1Q9NP62 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.15□□□□□ -1.91
GCM1Q9NP62 AL512604.1-201ENST00000404812 257 ntBASIC3.15□□□□□ -1.91
GCM1Q9NP62 RNA5SP89-201ENST00000410300 108 ntBASIC3.15□□□□□ -1.91
GCM1Q9NP62 CYCSP49-201ENST00000420810 319 ntBASIC3.15□□□□□ -1.91
GCM1Q9NP62 AIMP1P2-201ENST00000425294 312 ntBASIC3.15□□□□□ -1.91
GCM1Q9NP62 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms