Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 AC079140.5-201ENST00000507882 310 ntBASIC1.41□□□□□ -2.18
TM9SF3Q9HD45 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.41□□□□□ -2.18
TM9SF3Q9HD45 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC1.41□□□□□ -2.18
TM9SF3Q9HD45 Y_RNA.665-201ENST00000516177 98 ntBASIC1.41□□□□□ -2.18
TM9SF3Q9HD45 Y_RNA.675-201ENST00000516389 149 ntBASIC1.41□□□□□ -2.18
TM9SF3Q9HD45 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.41□□□□□ -2.18
TM9SF3Q9HD45 AC069114.2-201ENST00000604699 304 ntBASIC1.41□□□□□ -2.18
TM9SF3Q9HD45 AC104458.1-201ENST00000608243 463 ntBASIC1.41□□□□□ -2.18
TM9SF3Q9HD45 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.41□□□□□ -2.18
TM9SF3Q9HD45 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
TM9SF3Q9HD45 AC027514.1-201ENST00000588561 1603 ntBASIC1.4□□□□□ -2.18
TM9SF3Q9HD45 Y_RNA.224-201ENST00000364308 111 ntBASIC1.4□□□□□ -2.19
TM9SF3Q9HD45 SNORA29-201ENST00000384183 140 ntBASIC1.4□□□□□ -2.19
TM9SF3Q9HD45 RNU6-296P-201ENST00000384608 107 ntBASIC1.4□□□□□ -2.19
TM9SF3Q9HD45 RNU6-1093P-201ENST00000391194 107 ntBASIC1.4□□□□□ -2.19
TM9SF3Q9HD45 RNU6-908P-201ENST00000410160 94 ntBASIC1.4□□□□□ -2.19
TM9SF3Q9HD45 AC012306.1-201ENST00000423267 114 ntBASIC1.4□□□□□ -2.19
TM9SF3Q9HD45 HSPE1P9-201ENST00000440046 311 ntBASIC1.4□□□□□ -2.19
TM9SF3Q9HD45 MTND1P1-201ENST00000445453 368 ntBASIC1.4□□□□□ -2.19
TM9SF3Q9HD45 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.4□□□□□ -2.19
TM9SF3Q9HD45 RNU7-14P-201ENST00000459331 62 ntBASIC1.4□□□□□ -2.19
TM9SF3Q9HD45 AC091435.1-201ENST00000505442 584 ntBASIC1.4□□□□□ -2.19
TM9SF3Q9HD45 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.4□□□□□ -2.19
TM9SF3Q9HD45 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.4□□□□□ -2.19
TM9SF3Q9HD45 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.4□□□□□ -2.19
TM9SF3Q9HD45 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.4□□□□□ -2.19
TM9SF3Q9HD45 CYP4A27P-201ENST00000567218 190 ntBASIC1.4□□□□□ -2.19
TM9SF3Q9HD45 MIR3976-201ENST00000606807 139 ntBASIC1.4□□□□□ -2.19
TM9SF3Q9HD45 AL355802.3-201ENST00000607571 545 ntBASIC1.4□□□□□ -2.19
TM9SF3Q9HD45 MIR6504-201ENST00000613520 61 ntBASIC1.4□□□□□ -2.19
TM9SF3Q9HD45 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
TM9SF3Q9HD45 AC068137.3-201ENST00000639191 341 ntBASIC1.4□□□□□ -2.19
TM9SF3Q9HD45 AC100821.1-201ENST00000523153 2479 ntBASIC1.4□□□□□ -2.19
TM9SF3Q9HD45 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.4□□□□□ -2.19
TM9SF3Q9HD45 U8.1-201ENST00000362843 134 ntBASIC1.39□□□□□ -2.19
TM9SF3Q9HD45 RNU6-227P-201ENST00000362865 103 ntBASIC1.39□□□□□ -2.19
TM9SF3Q9HD45 SNORD1A-201ENST00000364968 72 ntBASIC1.39□□□□□ -2.19
TM9SF3Q9HD45 SNORA18.2-201ENST00000383865 132 ntBASIC1.39□□□□□ -2.19
TM9SF3Q9HD45 Y_RNA.481-201ENST00000384373 102 ntBASIC1.39□□□□□ -2.19
TM9SF3Q9HD45 Y_RNA.554-201ENST00000384672 102 ntBASIC1.39□□□□□ -2.19
TM9SF3Q9HD45 MIR521-1-201ENST00000384902 87 ntBASIC1.39□□□□□ -2.19
TM9SF3Q9HD45 MIR518E-201ENST00000385252 88 ntBASIC1.39□□□□□ -2.19
TM9SF3Q9HD45 MIR450B-201ENST00000401182 78 ntBASIC1.39□□□□□ -2.19
TM9SF3Q9HD45 AL590002.1-201ENST00000406554 418 ntBASIC1.39□□□□□ -2.19
TM9SF3Q9HD45 AL590632.1-201ENST00000424289 371 ntBASIC1.39□□□□□ -2.19
TM9SF3Q9HD45 ERLEC1P1-201ENST00000433806 578 ntBASIC1.39□□□□□ -2.19
TM9SF3Q9HD45 AL135790.2-201ENST00000437701 267 ntBASIC1.39□□□□□ -2.19
TM9SF3Q9HD45 SNRPGP13-201ENST00000442212 177 ntBASIC1.39□□□□□ -2.19
TM9SF3Q9HD45 AL359672.1-201ENST00000442302 409 ntBASIC1.39□□□□□ -2.19
TM9SF3Q9HD45 RNU1-123P-201ENST00000458950 160 ntBASIC1.39□□□□□ -2.19
TM9SF3Q9HD45 RNU7-187P-201ENST00000458985 68 ntBASIC1.39□□□□□ -2.19
TM9SF3Q9HD45 AC007547.1-201ENST00000462177 490 ntBASIC1.39□□□□□ -2.19
TM9SF3Q9HD45 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.39□□□□□ -2.19
TM9SF3Q9HD45 RNU6-506P-201ENST00000516553 94 ntBASIC1.39□□□□□ -2.19
TM9SF3Q9HD45 RNU5F-4P-201ENST00000516581 114 ntBASIC1.39□□□□□ -2.19
TM9SF3Q9HD45 RNA5SP481-201ENST00000516814 122 ntBASIC1.39□□□□□ -2.19
TM9SF3Q9HD45 EIF4A1P12-201ENST00000551910 141 ntBASIC1.39□□□□□ -2.19
TM9SF3Q9HD45 NDUFAF4P1-201ENST00000559425 519 ntBASIC1.39□□□□□ -2.19
TM9SF3Q9HD45 AC146944.4-201ENST00000602697 718 ntBASIC1.39□□□□□ -2.19
TM9SF3Q9HD45 AC004492.1-201ENST00000607036 742 ntBASIC1.39□□□□□ -2.19
TM9SF3Q9HD45 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.39□□□□□ -2.19
TM9SF3Q9HD45 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
TM9SF3Q9HD45 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.39□□□□□ -2.19
TM9SF3Q9HD45 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.39□□□□□ -2.19
TM9SF3Q9HD45 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.38□□□□□ -2.19
TM9SF3Q9HD45 RNU6-451P-201ENST00000362921 107 ntBASIC1.38□□□□□ -2.19
TM9SF3Q9HD45 Y_RNA.796-201ENST00000364268 102 ntBASIC1.38□□□□□ -2.19
TM9SF3Q9HD45 Y_RNA.799-201ENST00000364992 102 ntBASIC1.38□□□□□ -2.19
TM9SF3Q9HD45 SNORA32.2-201ENST00000384049 122 ntBASIC1.38□□□□□ -2.19
TM9SF3Q9HD45 RNU6-1106P-201ENST00000390845 107 ntBASIC1.38□□□□□ -2.19
TM9SF3Q9HD45 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.38□□□□□ -2.19
TM9SF3Q9HD45 USP9YP28-201ENST00000435142 589 ntBASIC1.38□□□□□ -2.19
TM9SF3Q9HD45 SEPT14P3-201ENST00000439401 183 ntBASIC1.38□□□□□ -2.19
TM9SF3Q9HD45 AL732372.2-207ENST00000445840 183 ntBASIC1.38□□□□□ -2.19
TM9SF3Q9HD45 SEPT14P2-201ENST00000453405 183 ntBASIC1.38□□□□□ -2.19
TM9SF3Q9HD45 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.38□□□□□ -2.19
TM9SF3Q9HD45 SEPT14P4-201ENST00000513445 186 ntBASIC1.38□□□□□ -2.19
TM9SF3Q9HD45 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.38□□□□□ -2.19
TM9SF3Q9HD45 FO082796.1-201ENST00000523795 183 ntBASIC1.38□□□□□ -2.19
TM9SF3Q9HD45 RRN3P3-201ENST00000549207 578 ntBASIC1.38□□□□□ -2.19
TM9SF3Q9HD45 SCOCP1-201ENST00000554676 349 ntBASIC1.38□□□□□ -2.19
TM9SF3Q9HD45 ZNF519P2-201ENST00000557032 169 ntBASIC1.38□□□□□ -2.19
TM9SF3Q9HD45 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.38□□□□□ -2.19
TM9SF3Q9HD45 AC009994.1-201ENST00000606889 253 ntBASIC1.38□□□□□ -2.19
TM9SF3Q9HD45 AC091895.1-201ENST00000624494 256 ntBASIC1.38□□□□□ -2.19
TM9SF3Q9HD45 AC068205.3-201ENST00000636385 468 ntBASIC1.38□□□□□ -2.19
TM9SF3Q9HD45 AC099654.12-201ENST00000639868 649 ntBASIC1.38□□□□□ -2.19
TM9SF3Q9HD45 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
TM9SF3Q9HD45 AC010615.1-201ENST00000594254 1764 ntBASIC1.37□□□□□ -2.19
TM9SF3Q9HD45 RNU6-545P-201ENST00000362681 104 ntBASIC1.37□□□□□ -2.19
TM9SF3Q9HD45 RNU6-254P-201ENST00000363377 107 ntBASIC1.37□□□□□ -2.19
TM9SF3Q9HD45 Y_RNA.256-201ENST00000364594 104 ntBASIC1.37□□□□□ -2.19
TM9SF3Q9HD45 SNORA25.8-201ENST00000364831 128 ntBASIC1.37□□□□□ -2.19
TM9SF3Q9HD45 RNU6-53P-201ENST00000365367 106 ntBASIC1.37□□□□□ -2.19
TM9SF3Q9HD45 RNU6-939P-201ENST00000384634 107 ntBASIC1.37□□□□□ -2.19
TM9SF3Q9HD45 RNU6-332P-201ENST00000391193 108 ntBASIC1.37□□□□□ -2.19
TM9SF3Q9HD45 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.37□□□□□ -2.19
TM9SF3Q9HD45 EIF4E2P1-201ENST00000393781 255 ntBASIC1.37□□□□□ -2.19
TM9SF3Q9HD45 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
TM9SF3Q9HD45 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms