Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
ZFYVE28Q9HCC9 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
ZFYVE28Q9HCC9 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
ZFYVE28Q9HCC9 RNA5SP126-201ENST00000365092 109 ntBASIC3.87□□□□□ -1.79
ZFYVE28Q9HCC9 AL031003.1-201ENST00000404229 172 ntBASIC3.87□□□□□ -1.79
ZFYVE28Q9HCC9 U8.19-201ENST00000459095 133 ntBASIC3.87□□□□□ -1.79
ZFYVE28Q9HCC9 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.87□□□□□ -1.79
ZFYVE28Q9HCC9 AL713866.2-201ENST00000603579 219 ntBASIC3.87□□□□□ -1.79
ZFYVE28Q9HCC9 RPL17P51-201ENST00000605218 238 ntBASIC3.87□□□□□ -1.79
ZFYVE28Q9HCC9 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
ZFYVE28Q9HCC9 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.87□□□□□ -1.79
ZFYVE28Q9HCC9 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
ZFYVE28Q9HCC9 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
ZFYVE28Q9HCC9 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
ZFYVE28Q9HCC9 U3.8-201ENST00000363675 217 ntBASIC3.86□□□□□ -1.79
ZFYVE28Q9HCC9 Y_RNA.182-201ENST00000363880 111 ntBASIC3.86□□□□□ -1.79
ZFYVE28Q9HCC9 SNORD115-30-201ENST00000364117 82 ntBASIC3.86□□□□□ -1.79
ZFYVE28Q9HCC9 Y_RNA.357-201ENST00000365487 109 ntBASIC3.86□□□□□ -1.79
ZFYVE28Q9HCC9 RNA5SP504-201ENST00000410676 117 ntBASIC3.86□□□□□ -1.79
ZFYVE28Q9HCC9 AL031183.1-201ENST00000457667 207 ntBASIC3.86□□□□□ -1.79
ZFYVE28Q9HCC9 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC3.86□□□□□ -1.79
ZFYVE28Q9HCC9 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.86□□□□□ -1.79
ZFYVE28Q9HCC9 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.86□□□□□ -1.79
ZFYVE28Q9HCC9 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
ZFYVE28Q9HCC9 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
ZFYVE28Q9HCC9 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
ZFYVE28Q9HCC9 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
ZFYVE28Q9HCC9 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
ZFYVE28Q9HCC9 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.85□□□□□ -1.79
ZFYVE28Q9HCC9 Y_RNA.23-201ENST00000362496 106 ntBASIC3.85□□□□□ -1.79
ZFYVE28Q9HCC9 RNU1-18P-201ENST00000363062 164 ntBASIC3.85□□□□□ -1.79
ZFYVE28Q9HCC9 RNU1-105P-201ENST00000363470 161 ntBASIC3.85□□□□□ -1.79
ZFYVE28Q9HCC9 RNU6-801P-201ENST00000364087 105 ntBASIC3.85□□□□□ -1.79
ZFYVE28Q9HCC9 Y_RNA.243-201ENST00000364481 109 ntBASIC3.85□□□□□ -1.79
ZFYVE28Q9HCC9 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
ZFYVE28Q9HCC9 SNORD116-18-201ENST00000383961 92 ntBASIC3.85□□□□□ -1.79
ZFYVE28Q9HCC9 RNU6-1077P-201ENST00000410506 102 ntBASIC3.85□□□□□ -1.79
ZFYVE28Q9HCC9 RNU5E-9P-201ENST00000411164 104 ntBASIC3.85□□□□□ -1.79
ZFYVE28Q9HCC9 BMS1P22-201ENST00000414726 313 ntBASIC3.85□□□□□ -1.79
ZFYVE28Q9HCC9 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.85□□□□□ -1.79
ZFYVE28Q9HCC9 RPS27AP9-201ENST00000477681 438 ntBASIC3.85□□□□□ -1.79
ZFYVE28Q9HCC9 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.85□□□□□ -1.79
ZFYVE28Q9HCC9 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.85□□□□□ -1.79
ZFYVE28Q9HCC9 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.85□□□□□ -1.79
ZFYVE28Q9HCC9 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
ZFYVE28Q9HCC9 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
ZFYVE28Q9HCC9 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.85□□□□□ -1.79
ZFYVE28Q9HCC9 AC010329.5-201ENST00000623497 2174 ntBASIC3.85□□□□□ -1.79
ZFYVE28Q9HCC9 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
ZFYVE28Q9HCC9 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.84□□□□□ -1.79
ZFYVE28Q9HCC9 Y_RNA.75-201ENST00000362927 97 ntBASIC3.84□□□□□ -1.79
ZFYVE28Q9HCC9 Y_RNA.287-201ENST00000364853 94 ntBASIC3.84□□□□□ -1.79
ZFYVE28Q9HCC9 RNU6-449P-201ENST00000383914 107 ntBASIC3.84□□□□□ -1.79
ZFYVE28Q9HCC9 SNORA67.2-201ENST00000384300 149 ntBASIC3.84□□□□□ -1.79
ZFYVE28Q9HCC9 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
ZFYVE28Q9HCC9 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.84□□□□□ -1.79
ZFYVE28Q9HCC9 AC097463.2-201ENST00000421074 142 ntBASIC3.84□□□□□ -1.79
ZFYVE28Q9HCC9 RN7SL863P-201ENST00000462370 296 ntBASIC3.84□□□□□ -1.79
ZFYVE28Q9HCC9 RN7SL93P-201ENST00000463035 293 ntBASIC3.84□□□□□ -1.79
ZFYVE28Q9HCC9 SRIP1-201ENST00000489235 288 ntBASIC3.84□□□□□ -1.79
ZFYVE28Q9HCC9 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3.84□□□□□ -1.79
ZFYVE28Q9HCC9 AL670379.2-201ENST00000604983 252 ntBASIC3.84□□□□□ -1.79
ZFYVE28Q9HCC9 U7.8-201ENST00000619968 63 ntBASIC3.84□□□□□ -1.79
ZFYVE28Q9HCC9 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
ZFYVE28Q9HCC9 AC006504.1-201ENST00000562493 3666 ntBASIC3.84□□□□□ -1.8
ZFYVE28Q9HCC9 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.83□□□□□ -1.8
ZFYVE28Q9HCC9 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.83□□□□□ -1.8
ZFYVE28Q9HCC9 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.83□□□□□ -1.8
ZFYVE28Q9HCC9 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
ZFYVE28Q9HCC9 RNU6-81P-201ENST00000365608 104 ntBASIC3.83□□□□□ -1.8
ZFYVE28Q9HCC9 Y_RNA.412-201ENST00000384001 104 ntBASIC3.83□□□□□ -1.8
ZFYVE28Q9HCC9 MIR591-201ENST00000385290 95 ntBASIC3.83□□□□□ -1.8
ZFYVE28Q9HCC9 MIR767-201ENST00000390228 109 ntBASIC3.83□□□□□ -1.8
ZFYVE28Q9HCC9 AC005840.1-201ENST00000498412 377 ntBASIC3.83□□□□□ -1.8
ZFYVE28Q9HCC9 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.83□□□□□ -1.8
ZFYVE28Q9HCC9 AC008739.2-201ENST00000597006 317 ntBASIC3.83□□□□□ -1.8
ZFYVE28Q9HCC9 AC013791.1-201ENST00000616619 62 ntBASIC3.83□□□□□ -1.8
ZFYVE28Q9HCC9 XIST_intron.1-201ENST00000619444 68 ntBASIC3.83□□□□□ -1.8
ZFYVE28Q9HCC9 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
ZFYVE28Q9HCC9 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.83□□□□□ -1.8
ZFYVE28Q9HCC9 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
ZFYVE28Q9HCC9 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
ZFYVE28Q9HCC9 AP001486.2-201ENST00000561652 5113 ntBASIC3.82□□□□□ -1.8
ZFYVE28Q9HCC9 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.82□□□□□ -1.8
ZFYVE28Q9HCC9 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.82□□□□□ -1.8
ZFYVE28Q9HCC9 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
ZFYVE28Q9HCC9 RNA5SP42-201ENST00000364278 115 ntBASIC3.82□□□□□ -1.8
ZFYVE28Q9HCC9 Y_RNA.343-201ENST00000365354 112 ntBASIC3.82□□□□□ -1.8
ZFYVE28Q9HCC9 RNU6-1130P-201ENST00000365434 107 ntBASIC3.82□□□□□ -1.8
ZFYVE28Q9HCC9 RNU6-1081P-201ENST00000384537 107 ntBASIC3.82□□□□□ -1.8
ZFYVE28Q9HCC9 HMGN2P8-201ENST00000391458 268 ntBASIC3.82□□□□□ -1.8
ZFYVE28Q9HCC9 Z98742.2-201ENST00000431564 187 ntBASIC3.82□□□□□ -1.8
ZFYVE28Q9HCC9 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.82□□□□□ -1.8
ZFYVE28Q9HCC9 AL049830.2-201ENST00000480072 201 ntBASIC3.82□□□□□ -1.8
ZFYVE28Q9HCC9 Y_RNA.797-201ENST00000515977 94 ntBASIC3.82□□□□□ -1.8
ZFYVE28Q9HCC9 AC100767.1-201ENST00000528178 123 ntBASIC3.82□□□□□ -1.8
ZFYVE28Q9HCC9 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.82□□□□□ -1.8
ZFYVE28Q9HCC9 MIR4474-201ENST00000579189 78 ntBASIC3.82□□□□□ -1.8
ZFYVE28Q9HCC9 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.82□□□□□ -1.8
ZFYVE28Q9HCC9 RNVU1-4-201ENST00000612985 164 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms