Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
VPS16Q9H269 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.8□□□□□ -1.96
VPS16Q9H269 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
VPS16Q9H269 LINC02555-201ENST00000563933 1951 ntBASIC2.8□□□□□ -1.96
VPS16Q9H269 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
VPS16Q9H269 Y_RNA.40-201ENST00000362645 93 ntBASIC2.8□□□□□ -1.96
VPS16Q9H269 RNU6-461P-201ENST00000364195 107 ntBASIC2.8□□□□□ -1.96
VPS16Q9H269 RNU4-56P-201ENST00000364700 142 ntBASIC2.8□□□□□ -1.96
VPS16Q9H269 RNU6-968P-201ENST00000384076 107 ntBASIC2.8□□□□□ -1.96
VPS16Q9H269 Y_RNA.462-201ENST00000384268 102 ntBASIC2.8□□□□□ -1.96
VPS16Q9H269 RNA5SP213-201ENST00000391031 106 ntBASIC2.8□□□□□ -1.96
VPS16Q9H269 SNORD58.1-201ENST00000391313 66 ntBASIC2.8□□□□□ -1.96
VPS16Q9H269 CBX3P9-201ENST00000402326 552 ntBASIC2.8□□□□□ -1.96
VPS16Q9H269 AL603910.2-201ENST00000407268 136 ntBASIC2.8□□□□□ -1.96
VPS16Q9H269 MIR548H3-201ENST00000408771 118 ntBASIC2.8□□□□□ -1.96
VPS16Q9H269 AIMP1P2-201ENST00000425294 312 ntBASIC2.8□□□□□ -1.96
VPS16Q9H269 MTND5P15-201ENST00000434246 349 ntBASIC2.8□□□□□ -1.96
VPS16Q9H269 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.8□□□□□ -1.96
VPS16Q9H269 AL121594.1-201ENST00000475906 575 ntBASIC2.8□□□□□ -1.96
VPS16Q9H269 RPL23AP70-201ENST00000483361 460 ntBASIC2.8□□□□□ -1.96
VPS16Q9H269 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.8□□□□□ -1.96
VPS16Q9H269 AC023141.11-201ENST00000508864 202 ntBASIC2.8□□□□□ -1.96
VPS16Q9H269 RPPH1-2P-201ENST00000516688 293 ntBASIC2.8□□□□□ -1.96
VPS16Q9H269 MIR2355-201ENST00000517199 87 ntBASIC2.8□□□□□ -1.96
VPS16Q9H269 AC021231.3-201ENST00000558497 370 ntBASIC2.8□□□□□ -1.96
VPS16Q9H269 AC130289.1-201ENST00000577321 73 ntBASIC2.8□□□□□ -1.96
VPS16Q9H269 AC105245.1-201ENST00000581934 244 ntBASIC2.8□□□□□ -1.96
VPS16Q9H269 MIR5092-201ENST00000583139 88 ntBASIC2.8□□□□□ -1.96
VPS16Q9H269 RPL12P50-201ENST00000603116 116 ntBASIC2.8□□□□□ -1.96
VPS16Q9H269 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.8□□□□□ -1.96
VPS16Q9H269 SNORA43.4-201ENST00000629559 138 ntBASIC2.8□□□□□ -1.96
VPS16Q9H269 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.8□□□□□ -1.96
VPS16Q9H269 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
VPS16Q9H269 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
VPS16Q9H269 Y_RNA.117-201ENST00000363294 101 ntBASIC2.79□□□□□ -1.96
VPS16Q9H269 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
VPS16Q9H269 RNU6-1286P-201ENST00000383871 107 ntBASIC2.79□□□□□ -1.96
VPS16Q9H269 RNU6-318P-201ENST00000384283 103 ntBASIC2.79□□□□□ -1.96
VPS16Q9H269 RNU6-102P-201ENST00000384485 104 ntBASIC2.79□□□□□ -1.96
VPS16Q9H269 MIR9-1-201ENST00000385198 89 ntBASIC2.79□□□□□ -1.96
VPS16Q9H269 Y_RNA.581-201ENST00000391017 97 ntBASIC2.79□□□□□ -1.96
VPS16Q9H269 Z92545.1-201ENST00000411782 234 ntBASIC2.79□□□□□ -1.96
VPS16Q9H269 AC096920.1-201ENST00000423991 241 ntBASIC2.79□□□□□ -1.96
VPS16Q9H269 AC019205.3-201ENST00000424573 156 ntBASIC2.79□□□□□ -1.96
VPS16Q9H269 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.79□□□□□ -1.96
VPS16Q9H269 AC092427.1-202ENST00000430569 476 ntBASIC2.79□□□□□ -1.96
VPS16Q9H269 AC105272.1-201ENST00000438604 198 ntBASIC2.79□□□□□ -1.96
VPS16Q9H269 AC107083.1-201ENST00000439643 279 ntBASIC2.79□□□□□ -1.96
VPS16Q9H269 AC016700.2-201ENST00000446011 156 ntBASIC2.79□□□□□ -1.96
VPS16Q9H269 AC073901.1-201ENST00000462471 408 ntBASIC2.79□□□□□ -1.96
VPS16Q9H269 RN7SKP132-201ENST00000516001 208 ntBASIC2.79□□□□□ -1.96
VPS16Q9H269 RNU5F-2P-201ENST00000516066 82 ntBASIC2.79□□□□□ -1.96
VPS16Q9H269 RNU6-1338P-201ENST00000516328 91 ntBASIC2.79□□□□□ -1.96
VPS16Q9H269 RNU6-567P-201ENST00000516746 107 ntBASIC2.79□□□□□ -1.96
VPS16Q9H269 SNORA31.15-201ENST00000516771 132 ntBASIC2.79□□□□□ -1.96
VPS16Q9H269 AC022868.1-201ENST00000517767 391 ntBASIC2.79□□□□□ -1.96
VPS16Q9H269 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.79□□□□□ -1.96
VPS16Q9H269 RPL30P11-203ENST00000598995 310 ntBASIC2.79□□□□□ -1.96
VPS16Q9H269 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
VPS16Q9H269 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.79□□□□□ -1.96
VPS16Q9H269 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.79□□□□□ -1.96
VPS16Q9H269 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.78□□□□□ -1.96
VPS16Q9H269 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
VPS16Q9H269 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
VPS16Q9H269 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.78□□□□□ -1.96
VPS16Q9H269 SNORD81.1-201ENST00000363064 77 ntBASIC2.78□□□□□ -1.96
VPS16Q9H269 RNA5SP393-201ENST00000363423 117 ntBASIC2.78□□□□□ -1.96
VPS16Q9H269 RNU6-525P-201ENST00000363685 104 ntBASIC2.78□□□□□ -1.96
VPS16Q9H269 Y_RNA.274-201ENST00000364714 101 ntBASIC2.78□□□□□ -1.96
VPS16Q9H269 RNU6-1062P-201ENST00000383908 107 ntBASIC2.78□□□□□ -1.96
VPS16Q9H269 RNU6-937P-201ENST00000384325 106 ntBASIC2.78□□□□□ -1.96
VPS16Q9H269 SNORA26.3-201ENST00000391119 136 ntBASIC2.78□□□□□ -1.96
VPS16Q9H269 RNA5SP181-201ENST00000410246 98 ntBASIC2.78□□□□□ -1.96
VPS16Q9H269 EIF1P2-201ENST00000428233 350 ntBASIC2.78□□□□□ -1.96
VPS16Q9H269 AL353705.4-201ENST00000449661 238 ntBASIC2.78□□□□□ -1.96
VPS16Q9H269 AC140059.1-201ENST00000489238 361 ntBASIC2.78□□□□□ -1.96
VPS16Q9H269 RPS23P5-201ENST00000495419 428 ntBASIC2.78□□□□□ -1.96
VPS16Q9H269 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.78□□□□□ -1.96
VPS16Q9H269 AC026470.2-201ENST00000561492 181 ntBASIC2.78□□□□□ -1.96
VPS16Q9H269 MIR4659A-201ENST00000580269 81 ntBASIC2.78□□□□□ -1.96
VPS16Q9H269 MIR3117-201ENST00000584034 78 ntBASIC2.78□□□□□ -1.96
VPS16Q9H269 AL356280.1-201ENST00000603614 379 ntBASIC2.78□□□□□ -1.96
VPS16Q9H269 AC098479.1-201ENST00000609225 154 ntBASIC2.78□□□□□ -1.96
VPS16Q9H269 SNORD98-201ENST00000636377 67 ntBASIC2.78□□□□□ -1.96
VPS16Q9H269 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.78□□□□□ -1.97
VPS16Q9H269 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.97
VPS16Q9H269 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.77□□□□□ -1.97
VPS16Q9H269 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
VPS16Q9H269 SNORD113-8-201ENST00000363497 74 ntBASIC2.77□□□□□ -1.97
VPS16Q9H269 SNORD115-32-201ENST00000364079 82 ntBASIC2.77□□□□□ -1.97
VPS16Q9H269 RNY1-201ENST00000364228 113 ntBASIC2.77□□□□□ -1.97
VPS16Q9H269 Y_RNA.277-201ENST00000364754 102 ntBASIC2.77□□□□□ -1.97
VPS16Q9H269 Y_RNA.352-201ENST00000365439 102 ntBASIC2.77□□□□□ -1.97
VPS16Q9H269 Y_RNA.785-201ENST00000384290 109 ntBASIC2.77□□□□□ -1.97
VPS16Q9H269 MIR32-201ENST00000384965 70 ntBASIC2.77□□□□□ -1.97
VPS16Q9H269 MIR487A-201ENST00000385009 80 ntBASIC2.77□□□□□ -1.97
VPS16Q9H269 SNORD78.2-201ENST00000391076 69 ntBASIC2.77□□□□□ -1.97
VPS16Q9H269 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.77□□□□□ -1.97
VPS16Q9H269 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.77□□□□□ -1.97
VPS16Q9H269 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms