Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 NDUFB4P10-201ENST00000452541 359 ntBASIC3.28□□□□□ -1.88
TRIM55Q9BYV6 SNORD127-201ENST00000458892 86 ntBASIC3.28□□□□□ -1.88
TRIM55Q9BYV6 RN7SKP40-201ENST00000517211 242 ntBASIC3.28□□□□□ -1.88
TRIM55Q9BYV6 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.28□□□□□ -1.88
TRIM55Q9BYV6 AC110588.1-201ENST00000559699 137 ntBASIC3.28□□□□□ -1.88
TRIM55Q9BYV6 YPEL5P2-201ENST00000605553 359 ntBASIC3.28□□□□□ -1.88
TRIM55Q9BYV6 MIR7112-201ENST00000616126 65 ntBASIC3.28□□□□□ -1.88
TRIM55Q9BYV6 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.28□□□□□ -1.88
TRIM55Q9BYV6 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.28□□□□□ -1.88
TRIM55Q9BYV6 AL356274.2-201ENST00000624379 3752 ntBASIC3.28□□□□□ -1.88
TRIM55Q9BYV6 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.28□□□□□ -1.89
TRIM55Q9BYV6 AC010615.1-201ENST00000594254 1764 ntBASIC3.28□□□□□ -1.89
TRIM55Q9BYV6 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
TRIM55Q9BYV6 RNU4-90P-201ENST00000362773 141 ntBASIC3.27□□□□□ -1.89
TRIM55Q9BYV6 Y_RNA.101-201ENST00000363154 102 ntBASIC3.27□□□□□ -1.89
TRIM55Q9BYV6 Y_RNA.286-201ENST00000364813 102 ntBASIC3.27□□□□□ -1.89
TRIM55Q9BYV6 SNORD31B-201ENST00000364977 69 ntBASIC3.27□□□□□ -1.89
TRIM55Q9BYV6 MIR561-201ENST00000385216 97 ntBASIC3.27□□□□□ -1.89
TRIM55Q9BYV6 MIR548B-201ENST00000385247 97 ntBASIC3.27□□□□□ -1.89
TRIM55Q9BYV6 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.27□□□□□ -1.89
TRIM55Q9BYV6 RNA5SP475-201ENST00000410568 110 ntBASIC3.27□□□□□ -1.89
TRIM55Q9BYV6 RNU2-48P-201ENST00000410694 191 ntBASIC3.27□□□□□ -1.89
TRIM55Q9BYV6 RNU2-38P-201ENST00000410856 79 ntBASIC3.27□□□□□ -1.89
TRIM55Q9BYV6 RN7SL75P-201ENST00000461926 281 ntBASIC3.27□□□□□ -1.89
TRIM55Q9BYV6 AC107222.1-201ENST00000510899 637 ntBASIC3.27□□□□□ -1.89
TRIM55Q9BYV6 AC022441.3-201ENST00000605737 136 ntBASIC3.27□□□□□ -1.89
TRIM55Q9BYV6 uc_338.1-201ENST00000612113 180 ntBASIC3.27□□□□□ -1.89
TRIM55Q9BYV6 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
TRIM55Q9BYV6 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
TRIM55Q9BYV6 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.27□□□□□ -1.89
TRIM55Q9BYV6 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
TRIM55Q9BYV6 AC093831.2-201ENST00000624393 3427 ntBASIC3.26□□□□□ -1.89
TRIM55Q9BYV6 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.26□□□□□ -1.89
TRIM55Q9BYV6 RNU6-743P-201ENST00000364151 106 ntBASIC3.26□□□□□ -1.89
TRIM55Q9BYV6 Y_RNA.307-201ENST00000365022 117 ntBASIC3.26□□□□□ -1.89
TRIM55Q9BYV6 SNORA46-201ENST00000384762 135 ntBASIC3.26□□□□□ -1.89
TRIM55Q9BYV6 RN7SKP123-201ENST00000410732 291 ntBASIC3.26□□□□□ -1.89
TRIM55Q9BYV6 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC3.26□□□□□ -1.89
TRIM55Q9BYV6 TOMM22P2-201ENST00000430735 237 ntBASIC3.26□□□□□ -1.89
TRIM55Q9BYV6 RNU6-1132P-201ENST00000459214 107 ntBASIC3.26□□□□□ -1.89
TRIM55Q9BYV6 AC018868.1-201ENST00000491307 315 ntBASIC3.26□□□□□ -1.89
TRIM55Q9BYV6 HMGB3P17-201ENST00000504195 649 ntBASIC3.26□□□□□ -1.89
TRIM55Q9BYV6 RNU6-966P-201ENST00000516479 104 ntBASIC3.26□□□□□ -1.89
TRIM55Q9BYV6 RNA5SP490-201ENST00000517141 136 ntBASIC3.26□□□□□ -1.89
TRIM55Q9BYV6 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.26□□□□□ -1.89
TRIM55Q9BYV6 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC3.26□□□□□ -1.89
TRIM55Q9BYV6 MIR4753-201ENST00000585119 83 ntBASIC3.26□□□□□ -1.89
TRIM55Q9BYV6 AC127459.3-201ENST00000624328 466 ntBASIC3.26□□□□□ -1.89
TRIM55Q9BYV6 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.25□□□□□ -1.89
TRIM55Q9BYV6 Y_RNA.16-201ENST00000362421 102 ntBASIC3.25□□□□□ -1.89
TRIM55Q9BYV6 RNU6-290P-201ENST00000365212 101 ntBASIC3.25□□□□□ -1.89
TRIM55Q9BYV6 Y_RNA.331-201ENST00000365267 102 ntBASIC3.25□□□□□ -1.89
TRIM55Q9BYV6 AL357075.1-201ENST00000404107 726 ntBASIC3.25□□□□□ -1.89
TRIM55Q9BYV6 AL357139.1-201ENST00000407792 426 ntBASIC3.25□□□□□ -1.89
TRIM55Q9BYV6 RPL23AP36-201ENST00000413895 458 ntBASIC3.25□□□□□ -1.89
TRIM55Q9BYV6 BMS1P22-201ENST00000414726 313 ntBASIC3.25□□□□□ -1.89
TRIM55Q9BYV6 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.25□□□□□ -1.89
TRIM55Q9BYV6 HMGN2P18-201ENST00000450680 270 ntBASIC3.25□□□□□ -1.89
TRIM55Q9BYV6 UQCRHP3-201ENST00000451503 251 ntBASIC3.25□□□□□ -1.89
TRIM55Q9BYV6 AC005042.3-201ENST00000453230 174 ntBASIC3.25□□□□□ -1.89
TRIM55Q9BYV6 RPL23AP3-201ENST00000453844 468 ntBASIC3.25□□□□□ -1.89
TRIM55Q9BYV6 AC016925.1-201ENST00000458303 298 ntBASIC3.25□□□□□ -1.89
TRIM55Q9BYV6 AP001486.1-201ENST00000463339 476 ntBASIC3.25□□□□□ -1.89
TRIM55Q9BYV6 AL049873.1-201ENST00000480540 376 ntBASIC3.25□□□□□ -1.89
TRIM55Q9BYV6 RNU6-1338P-201ENST00000516328 91 ntBASIC3.25□□□□□ -1.89
TRIM55Q9BYV6 DEFB108E-201ENST00000524692 240 ntBASIC3.25□□□□□ -1.89
TRIM55Q9BYV6 PRELID2P1-201ENST00000552837 301 ntBASIC3.25□□□□□ -1.89
TRIM55Q9BYV6 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.25□□□□□ -1.89
TRIM55Q9BYV6 AL449363.1-201ENST00000617815 186 ntBASIC3.25□□□□□ -1.89
TRIM55Q9BYV6 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.25□□□□□ -1.89
TRIM55Q9BYV6 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.25□□□□□ -1.89
TRIM55Q9BYV6 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
TRIM55Q9BYV6 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.24□□□□□ -1.89
TRIM55Q9BYV6 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.24□□□□□ -1.89
TRIM55Q9BYV6 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.24□□□□□ -1.89
TRIM55Q9BYV6 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
TRIM55Q9BYV6 Y_RNA.188-201ENST00000363952 111 ntBASIC3.24□□□□□ -1.89
TRIM55Q9BYV6 RNU6-454P-201ENST00000364292 107 ntBASIC3.24□□□□□ -1.89
TRIM55Q9BYV6 Y_RNA.237-201ENST00000364439 102 ntBASIC3.24□□□□□ -1.89
TRIM55Q9BYV6 MT-TG-201ENST00000387429 68 ntBASIC3.24□□□□□ -1.89
TRIM55Q9BYV6 SNORA48.5-201ENST00000391143 135 ntBASIC3.24□□□□□ -1.89
TRIM55Q9BYV6 RN7SKP58-201ENST00000411010 305 ntBASIC3.24□□□□□ -1.89
TRIM55Q9BYV6 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.24□□□□□ -1.89
TRIM55Q9BYV6 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.24□□□□□ -1.89
TRIM55Q9BYV6 IGKV2-26-201ENST00000518305 343 ntBASIC3.24□□□□□ -1.89
TRIM55Q9BYV6 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.24□□□□□ -1.89
TRIM55Q9BYV6 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.24□□□□□ -1.89
TRIM55Q9BYV6 AC006001.4-201ENST00000622243 395 ntBASIC3.24□□□□□ -1.89
TRIM55Q9BYV6 IGHVIII-44-202ENST00000636235 289 ntBASIC3.24□□□□□ -1.89
TRIM55Q9BYV6 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.24□□□□□ -1.89
TRIM55Q9BYV6 AC093010.3-201ENST00000570269 15214 ntBASIC3.24□□□□□ -1.89
TRIM55Q9BYV6 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.24□□□□□ -1.89
TRIM55Q9BYV6 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.24□□□□□ -1.89
TRIM55Q9BYV6 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.24□□□□□ -1.89
TRIM55Q9BYV6 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
TRIM55Q9BYV6 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
TRIM55Q9BYV6 Y_RNA.14-201ENST00000362415 103 ntBASIC3.23□□□□□ -1.89
TRIM55Q9BYV6 RNU6-438P-201ENST00000365561 103 ntBASIC3.23□□□□□ -1.89
TRIM55Q9BYV6 Y_RNA.446-201ENST00000384178 104 ntBASIC3.23□□□□□ -1.89
TRIM55Q9BYV6 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 133.6 ms