Protein–RNA interactions for Protein: Q9BXW4

MAP1LC3C, Microtubule-associated proteins 1A/1B light chain 3C, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3CQ9BXW4 Y_RNA.123-201ENST00000363338 102 ntBASIC0.66□□□□□ -2.3
MAP1LC3CQ9BXW4 SNORD114-2-201ENST00000363953 78 ntBASIC0.66□□□□□ -2.3
MAP1LC3CQ9BXW4 RNU4-38P-201ENST00000364472 129 ntBASIC0.66□□□□□ -2.3
MAP1LC3CQ9BXW4 SNORA67.2-201ENST00000384300 149 ntBASIC0.66□□□□□ -2.3
MAP1LC3CQ9BXW4 MIR942-201ENST00000401111 86 ntBASIC0.66□□□□□ -2.3
MAP1LC3CQ9BXW4 SNORA11-201ENST00000408789 128 ntBASIC0.66□□□□□ -2.3
MAP1LC3CQ9BXW4 RNU6-248P-201ENST00000410720 107 ntBASIC0.66□□□□□ -2.3
MAP1LC3CQ9BXW4 RPS3AP1-201ENST00000413190 320 ntBASIC0.66□□□□□ -2.3
MAP1LC3CQ9BXW4 RN7SKP210-201ENST00000459176 261 ntBASIC0.66□□□□□ -2.3
MAP1LC3CQ9BXW4 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC0.66□□□□□ -2.3
MAP1LC3CQ9BXW4 HMGB1P29-201ENST00000505659 499 ntBASIC0.66□□□□□ -2.3
MAP1LC3CQ9BXW4 MDM2-233ENST00000545204 398 ntTSL 5 BASIC0.66□□□□□ -2.3
MAP1LC3CQ9BXW4 AC008015.1-201ENST00000555505 465 ntBASIC0.66□□□□□ -2.3
MAP1LC3CQ9BXW4 MIR5583-1-201ENST00000580941 59 ntBASIC0.66□□□□□ -2.3
MAP1LC3CQ9BXW4 MIR4303-201ENST00000581299 66 ntBASIC0.66□□□□□ -2.3
MAP1LC3CQ9BXW4 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.66□□□□□ -2.3
MAP1LC3CQ9BXW4 uc_338.34-201ENST00000617467 174 ntBASIC0.66□□□□□ -2.3
MAP1LC3CQ9BXW4 AC072046.2-201ENST00000618366 268 ntBASIC0.66□□□□□ -2.3
MAP1LC3CQ9BXW4 AC139792.3-201ENST00000623525 224 ntBASIC0.66□□□□□ -2.3
MAP1LC3CQ9BXW4 OR4G1P-203ENST00000641984 1631 ntBASIC0.66□□□□□ -2.3
MAP1LC3CQ9BXW4 RNU6-199P-201ENST00000362954 107 ntBASIC0.65□□□□□ -2.31
MAP1LC3CQ9BXW4 MIR653-201ENST00000385279 96 ntBASIC0.65□□□□□ -2.31
MAP1LC3CQ9BXW4 RNA5SP219-201ENST00000390940 113 ntBASIC0.65□□□□□ -2.31
MAP1LC3CQ9BXW4 AL451046.2-201ENST00000403074 277 ntBASIC0.65□□□□□ -2.31
MAP1LC3CQ9BXW4 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC0.65□□□□□ -2.31
MAP1LC3CQ9BXW4 MTATP6P18-201ENST00000417994 673 ntBASIC0.65□□□□□ -2.31
MAP1LC3CQ9BXW4 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.65□□□□□ -2.31
MAP1LC3CQ9BXW4 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.65□□□□□ -2.31
MAP1LC3CQ9BXW4 RNU7-180P-201ENST00000459240 63 ntBASIC0.65□□□□□ -2.31
MAP1LC3CQ9BXW4 AC087854.1-201ENST00000519706 414 ntBASIC0.65□□□□□ -2.31
MAP1LC3CQ9BXW4 MRPS36P4-201ENST00000534436 298 ntBASIC0.65□□□□□ -2.31
MAP1LC3CQ9BXW4 AC090049.2-201ENST00000550377 109 ntBASIC0.65□□□□□ -2.31
MAP1LC3CQ9BXW4 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.65□□□□□ -2.31
MAP1LC3CQ9BXW4 MTATP6P3-201ENST00000581686 676 ntBASIC0.65□□□□□ -2.31
MAP1LC3CQ9BXW4 AC022432.1-201ENST00000595739 310 ntBASIC0.65□□□□□ -2.31
MAP1LC3CQ9BXW4 SNORA28-201ENST00000606769 126 ntBASIC0.65□□□□□ -2.31
MAP1LC3CQ9BXW4 SNORD11B-201ENST00000607707 90 ntBASIC0.65□□□□□ -2.31
MAP1LC3CQ9BXW4 MIR6078-201ENST00000611069 100 ntBASIC0.65□□□□□ -2.31
MAP1LC3CQ9BXW4 AL353770.2-201ENST00000620024 78 ntBASIC0.65□□□□□ -2.31
MAP1LC3CQ9BXW4 AC005858.4-201ENST00000623191 700 ntBASIC0.65□□□□□ -2.31
MAP1LC3CQ9BXW4 AC008163.1-202ENST00000636004 2889 ntBASIC0.65□□□□□ -2.31
MAP1LC3CQ9BXW4 SNORA7.1-201ENST00000363750 139 ntBASIC0.64□□□□□ -2.31
MAP1LC3CQ9BXW4 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.64□□□□□ -2.31
MAP1LC3CQ9BXW4 AF228730.1-201ENST00000397972 663 ntBASIC0.64□□□□□ -2.31
MAP1LC3CQ9BXW4 RNU6-1186P-201ENST00000410429 97 ntBASIC0.64□□□□□ -2.31
MAP1LC3CQ9BXW4 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0.64□□□□□ -2.31
MAP1LC3CQ9BXW4 SNRPEP10-201ENST00000420249 274 ntBASIC0.64□□□□□ -2.31
MAP1LC3CQ9BXW4 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.64□□□□□ -2.31
MAP1LC3CQ9BXW4 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.64□□□□□ -2.31
MAP1LC3CQ9BXW4 AC005002.2-201ENST00000438228 269 ntBASIC0.64□□□□□ -2.31
MAP1LC3CQ9BXW4 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.64□□□□□ -2.31
MAP1LC3CQ9BXW4 RNU7-63P-201ENST00000459054 62 ntBASIC0.64□□□□□ -2.31
MAP1LC3CQ9BXW4 BET1P1-201ENST00000482276 359 ntBASIC0.64□□□□□ -2.31
MAP1LC3CQ9BXW4 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC0.64□□□□□ -2.31
MAP1LC3CQ9BXW4 RNU6-947P-201ENST00000516264 106 ntBASIC0.64□□□□□ -2.31
MAP1LC3CQ9BXW4 RNU1-117P-201ENST00000517041 158 ntBASIC0.64□□□□□ -2.31
MAP1LC3CQ9BXW4 RNU6-548P-201ENST00000517083 115 ntBASIC0.64□□□□□ -2.31
MAP1LC3CQ9BXW4 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.64□□□□□ -2.31
MAP1LC3CQ9BXW4 APOOP3-201ENST00000536787 586 ntBASIC0.64□□□□□ -2.31
MAP1LC3CQ9BXW4 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC0.64□□□□□ -2.31
MAP1LC3CQ9BXW4 SCOCP1-201ENST00000554676 349 ntBASIC0.64□□□□□ -2.31
MAP1LC3CQ9BXW4 AC106800.4-201ENST00000614905 153 ntBASIC0.64□□□□□ -2.31
MAP1LC3CQ9BXW4 AL157834.3-201ENST00000615543 103 ntBASIC0.64□□□□□ -2.31
MAP1LC3CQ9BXW4 AC005609.4-201ENST00000625071 447 ntBASIC0.64□□□□□ -2.31
MAP1LC3CQ9BXW4 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.64□□□□□ -2.31
MAP1LC3CQ9BXW4 RNU6-1266P-201ENST00000362794 105 ntBASIC0.63□□□□□ -2.31
MAP1LC3CQ9BXW4 RNU4-21P-201ENST00000362802 126 ntBASIC0.63□□□□□ -2.31
MAP1LC3CQ9BXW4 Y_RNA.201-201ENST00000364052 96 ntBASIC0.63□□□□□ -2.31
MAP1LC3CQ9BXW4 RNU6-1317P-201ENST00000364582 104 ntBASIC0.63□□□□□ -2.31
MAP1LC3CQ9BXW4 RNY3P10-201ENST00000384764 102 ntBASIC0.63□□□□□ -2.31
MAP1LC3CQ9BXW4 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.63□□□□□ -2.31
MAP1LC3CQ9BXW4 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.63□□□□□ -2.31
MAP1LC3CQ9BXW4 AF186996.7-201ENST00000492781 209 ntBASIC0.63□□□□□ -2.31
MAP1LC3CQ9BXW4 RNU7-99P-201ENST00000516271 62 ntBASIC0.63□□□□□ -2.31
MAP1LC3CQ9BXW4 RNU6-759P-201ENST00000516740 103 ntBASIC0.63□□□□□ -2.31
MAP1LC3CQ9BXW4 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
MAP1LC3CQ9BXW4 MIR3913-1-201ENST00000577744 102 ntBASIC0.63□□□□□ -2.31
MAP1LC3CQ9BXW4 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC0.63□□□□□ -2.31
MAP1LC3CQ9BXW4 RMST_3.1-201ENST00000611651 109 ntBASIC0.63□□□□□ -2.31
MAP1LC3CQ9BXW4 HULC.1-201ENST00000612720 240 ntBASIC0.63□□□□□ -2.31
MAP1LC3CQ9BXW4 DLEU1_1.1-201ENST00000618107 190 ntBASIC0.63□□□□□ -2.31
MAP1LC3CQ9BXW4 FER-210ENST00000628534 558 ntTSL 5 BASIC0.63□□□□□ -2.31
MAP1LC3CQ9BXW4 ZNF204P-201ENST00000416749 2397 ntBASIC0.62□□□□□ -2.31
MAP1LC3CQ9BXW4 RNU6-245P-201ENST00000384020 107 ntBASIC0.62□□□□□ -2.31
MAP1LC3CQ9BXW4 SNORD41-201ENST00000386967 70 ntBASIC0.62□□□□□ -2.31
MAP1LC3CQ9BXW4 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC0.62□□□□□ -2.31
MAP1LC3CQ9BXW4 SNRPGP9-201ENST00000456025 225 ntBASIC0.62□□□□□ -2.31
MAP1LC3CQ9BXW4 RNA5SP54-201ENST00000516951 92 ntBASIC0.62□□□□□ -2.31
MAP1LC3CQ9BXW4 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC0.62□□□□□ -2.31
MAP1LC3CQ9BXW4 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC0.62□□□□□ -2.31
MAP1LC3CQ9BXW4 AC004223.2-201ENST00000590309 544 ntBASIC0.62□□□□□ -2.31
MAP1LC3CQ9BXW4 AC064836.2-201ENST00000609491 462 ntBASIC0.62□□□□□ -2.31
MAP1LC3CQ9BXW4 U6.73-201ENST00000619194 103 ntBASIC0.62□□□□□ -2.31
MAP1LC3CQ9BXW4 SRP54-214ENST00000630962 162 ntTSL 5 BASIC0.62□□□□□ -2.31
MAP1LC3CQ9BXW4 OR5AK4P-201ENST00000635912 903 ntBASIC0.62□□□□□ -2.31
MAP1LC3CQ9BXW4 AP000568.1-201ENST00000282964 442 ntBASIC0.61□□□□□ -2.31
MAP1LC3CQ9BXW4 RNU6-996P-201ENST00000365438 107 ntBASIC0.61□□□□□ -2.31
MAP1LC3CQ9BXW4 Y_RNA.363-201ENST00000365529 113 ntBASIC0.61□□□□□ -2.31
MAP1LC3CQ9BXW4 RNU6-969P-201ENST00000383900 105 ntBASIC0.61□□□□□ -2.31
MAP1LC3CQ9BXW4 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms