Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 PRELID3BP1-201ENST00000457142 540 ntBASIC3.79□□□□□ -1.8
TRAIPQ9BWF2 PRELID2P1-201ENST00000552837 301 ntBASIC3.79□□□□□ -1.8
TRAIPQ9BWF2 U4.6-201ENST00000621618 127 ntBASIC3.79□□□□□ -1.8
TRAIPQ9BWF2 AC091953.5-201ENST00000622919 233 ntBASIC3.79□□□□□ -1.8
TRAIPQ9BWF2 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.79□□□□□ -1.8
TRAIPQ9BWF2 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
TRAIPQ9BWF2 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
TRAIPQ9BWF2 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
TRAIPQ9BWF2 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
TRAIPQ9BWF2 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
TRAIPQ9BWF2 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.78□□□□□ -1.8
TRAIPQ9BWF2 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.78□□□□□ -1.8
TRAIPQ9BWF2 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.78□□□□□ -1.8
TRAIPQ9BWF2 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
TRAIPQ9BWF2 RNA5SP197-201ENST00000363357 119 ntBASIC3.78□□□□□ -1.8
TRAIPQ9BWF2 Y_RNA.237-201ENST00000364439 102 ntBASIC3.78□□□□□ -1.8
TRAIPQ9BWF2 Y_RNA.286-201ENST00000364813 102 ntBASIC3.78□□□□□ -1.8
TRAIPQ9BWF2 Y_RNA.350-201ENST00000365409 98 ntBASIC3.78□□□□□ -1.8
TRAIPQ9BWF2 MIR184-201ENST00000384962 84 ntBASIC3.78□□□□□ -1.8
TRAIPQ9BWF2 MIR548H3-201ENST00000408771 118 ntBASIC3.78□□□□□ -1.8
TRAIPQ9BWF2 RNU2-48P-201ENST00000410694 191 ntBASIC3.78□□□□□ -1.8
TRAIPQ9BWF2 RPL21P10-201ENST00000463521 490 ntBASIC3.78□□□□□ -1.8
TRAIPQ9BWF2 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC3.78□□□□□ -1.8
TRAIPQ9BWF2 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC3.78□□□□□ -1.8
TRAIPQ9BWF2 AP002001.1-203ENST00000534002 267 ntBASIC3.78□□□□□ -1.8
TRAIPQ9BWF2 RMST_8.1-201ENST00000610287 165 ntBASIC3.78□□□□□ -1.8
TRAIPQ9BWF2 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.78□□□□□ -1.8
TRAIPQ9BWF2 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
TRAIPQ9BWF2 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
TRAIPQ9BWF2 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
TRAIPQ9BWF2 Y_RNA.476-201ENST00000384347 108 ntBASIC3.77□□□□□ -1.81
TRAIPQ9BWF2 RNU2-38P-201ENST00000410856 79 ntBASIC3.77□□□□□ -1.81
TRAIPQ9BWF2 AL357134.1-201ENST00000445848 426 ntBASIC3.77□□□□□ -1.81
TRAIPQ9BWF2 RNU6-221P-201ENST00000459541 99 ntBASIC3.77□□□□□ -1.81
TRAIPQ9BWF2 SNORA70.12-201ENST00000516084 153 ntBASIC3.77□□□□□ -1.81
TRAIPQ9BWF2 RNU2-12P-201ENST00000517216 168 ntBASIC3.77□□□□□ -1.81
TRAIPQ9BWF2 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.77□□□□□ -1.81
TRAIPQ9BWF2 SDR42E1P4-201ENST00000620894 481 ntBASIC3.77□□□□□ -1.81
TRAIPQ9BWF2 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
TRAIPQ9BWF2 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
TRAIPQ9BWF2 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
TRAIPQ9BWF2 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
TRAIPQ9BWF2 Y_RNA.14-201ENST00000362415 103 ntBASIC3.76□□□□□ -1.81
TRAIPQ9BWF2 Y_RNA.99-201ENST00000363138 105 ntBASIC3.76□□□□□ -1.81
TRAIPQ9BWF2 RNU6-454P-201ENST00000364292 107 ntBASIC3.76□□□□□ -1.81
TRAIPQ9BWF2 AL139095.1-201ENST00000404326 391 ntBASIC3.76□□□□□ -1.81
TRAIPQ9BWF2 AC139712.2-201ENST00000424302 339 ntBASIC3.76□□□□□ -1.81
TRAIPQ9BWF2 RPL23AP3-201ENST00000453844 468 ntBASIC3.76□□□□□ -1.81
TRAIPQ9BWF2 BX510359.1-201ENST00000456973 237 ntBASIC3.76□□□□□ -1.81
TRAIPQ9BWF2 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.76□□□□□ -1.81
TRAIPQ9BWF2 FCF1P8-201ENST00000510322 597 ntBASIC3.76□□□□□ -1.81
TRAIPQ9BWF2 SERF1AP1-201ENST00000514575 187 ntBASIC3.76□□□□□ -1.81
TRAIPQ9BWF2 AC023157.2-201ENST00000540596 141 ntBASIC3.76□□□□□ -1.81
TRAIPQ9BWF2 AL512605.2-201ENST00000592972 256 ntBASIC3.76□□□□□ -1.81
TRAIPQ9BWF2 AP001282.2-201ENST00000616149 309 ntBASIC3.76□□□□□ -1.81
TRAIPQ9BWF2 PWAR6-201ENST00000552334 4618 ntBASIC3.76□□□□□ -1.81
TRAIPQ9BWF2 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
TRAIPQ9BWF2 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
TRAIPQ9BWF2 Y_RNA.16-201ENST00000362421 102 ntBASIC3.75□□□□□ -1.81
TRAIPQ9BWF2 MIR1253-201ENST00000408273 105 ntBASIC3.75□□□□□ -1.81
TRAIPQ9BWF2 U3.40-201ENST00000408706 208 ntBASIC3.75□□□□□ -1.81
TRAIPQ9BWF2 RNA5SP492-201ENST00000411330 114 ntBASIC3.75□□□□□ -1.81
TRAIPQ9BWF2 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.75□□□□□ -1.81
TRAIPQ9BWF2 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC3.75□□□□□ -1.81
TRAIPQ9BWF2 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.75□□□□□ -1.81
TRAIPQ9BWF2 RN7SKP57-201ENST00000517248 293 ntBASIC3.75□□□□□ -1.81
TRAIPQ9BWF2 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.75□□□□□ -1.81
TRAIPQ9BWF2 AC127459.3-201ENST00000624328 466 ntBASIC3.75□□□□□ -1.81
TRAIPQ9BWF2 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
TRAIPQ9BWF2 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
TRAIPQ9BWF2 AL021368.2-201ENST00000606125 5352 ntBASIC3.74□□□□□ -1.81
TRAIPQ9BWF2 MT-TG-201ENST00000387429 68 ntBASIC3.74□□□□□ -1.81
TRAIPQ9BWF2 AL357552.1-201ENST00000445254 415 ntBASIC3.74□□□□□ -1.81
TRAIPQ9BWF2 AC092185.1-201ENST00000491371 97 ntBASIC3.74□□□□□ -1.81
TRAIPQ9BWF2 CYCSP26-201ENST00000534107 320 ntBASIC3.74□□□□□ -1.81
TRAIPQ9BWF2 MIR7112-201ENST00000616126 65 ntBASIC3.74□□□□□ -1.81
TRAIPQ9BWF2 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.74□□□□□ -1.81
TRAIPQ9BWF2 MIR7153-201ENST00000637758 57 ntBASIC3.74□□□□□ -1.81
TRAIPQ9BWF2 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
TRAIPQ9BWF2 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
TRAIPQ9BWF2 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
TRAIPQ9BWF2 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
TRAIPQ9BWF2 RNU6-525P-201ENST00000363685 104 ntBASIC3.73□□□□□ -1.81
TRAIPQ9BWF2 RNU6-271P-201ENST00000363858 105 ntBASIC3.73□□□□□ -1.81
TRAIPQ9BWF2 Y_RNA.307-201ENST00000365022 117 ntBASIC3.73□□□□□ -1.81
TRAIPQ9BWF2 RNU6-1240P-201ENST00000365155 104 ntBASIC3.73□□□□□ -1.81
TRAIPQ9BWF2 Y_RNA.478-201ENST00000384358 107 ntBASIC3.73□□□□□ -1.81
TRAIPQ9BWF2 RNU6-160P-201ENST00000384591 107 ntBASIC3.73□□□□□ -1.81
TRAIPQ9BWF2 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.73□□□□□ -1.81
TRAIPQ9BWF2 RNU6-710P-201ENST00000410424 105 ntBASIC3.73□□□□□ -1.81
TRAIPQ9BWF2 RPL19P1-201ENST00000411635 428 ntBASIC3.73□□□□□ -1.81
TRAIPQ9BWF2 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.73□□□□□ -1.81
TRAIPQ9BWF2 AP001486.1-201ENST00000463339 476 ntBASIC3.73□□□□□ -1.81
TRAIPQ9BWF2 AC010531.2-201ENST00000465012 153 ntBASIC3.73□□□□□ -1.81
TRAIPQ9BWF2 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.73□□□□□ -1.81
TRAIPQ9BWF2 AC026333.2-201ENST00000542164 106 ntBASIC3.73□□□□□ -1.81
TRAIPQ9BWF2 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC3.73□□□□□ -1.81
TRAIPQ9BWF2 MIR3671-201ENST00000580455 88 ntBASIC3.73□□□□□ -1.81
TRAIPQ9BWF2 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.73□□□□□ -1.81
TRAIPQ9BWF2 MIR8057-201ENST00000620957 69 ntBASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms