Protein–RNA interactions for Protein: Q9BRR0

ZKSCAN3, Zinc finger protein with KRAB and SCAN domains 3, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN3Q9BRR0 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
ZKSCAN3Q9BRR0 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.84□□□□□ -1.79
ZKSCAN3Q9BRR0 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
ZKSCAN3Q9BRR0 PWAR6-201ENST00000552334 4618 ntBASIC3.84□□□□□ -1.79
ZKSCAN3Q9BRR0 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
ZKSCAN3Q9BRR0 U3.8-201ENST00000363675 217 ntBASIC3.84□□□□□ -1.79
ZKSCAN3Q9BRR0 SNORD6-201ENST00000365444 73 ntBASIC3.84□□□□□ -1.79
ZKSCAN3Q9BRR0 SNORA72.4-201ENST00000384174 132 ntBASIC3.84□□□□□ -1.79
ZKSCAN3Q9BRR0 RNU6-578P-201ENST00000390980 103 ntBASIC3.84□□□□□ -1.79
ZKSCAN3Q9BRR0 AL355497.1-201ENST00000406262 551 ntBASIC3.84□□□□□ -1.79
ZKSCAN3Q9BRR0 HMGN2P20-201ENST00000437531 273 ntBASIC3.84□□□□□ -1.79
ZKSCAN3Q9BRR0 AC146507.2-201ENST00000460608 476 ntBASIC3.84□□□□□ -1.79
ZKSCAN3Q9BRR0 RNU6-426P-201ENST00000516464 97 ntBASIC3.84□□□□□ -1.79
ZKSCAN3Q9BRR0 RNU7-121P-201ENST00000516604 62 ntBASIC3.84□□□□□ -1.79
ZKSCAN3Q9BRR0 RNU2-44P-201ENST00000516795 194 ntBASIC3.84□□□□□ -1.79
ZKSCAN3Q9BRR0 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.84□□□□□ -1.79
ZKSCAN3Q9BRR0 AC069294.1-201ENST00000608397 350 ntBASIC3.84□□□□□ -1.79
ZKSCAN3Q9BRR0 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.8
ZKSCAN3Q9BRR0 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.84□□□□□ -1.8
ZKSCAN3Q9BRR0 AC069528.2-201ENST00000624849 1991 ntBASIC3.83□□□□□ -1.8
ZKSCAN3Q9BRR0 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.83□□□□□ -1.8
ZKSCAN3Q9BRR0 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
ZKSCAN3Q9BRR0 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
ZKSCAN3Q9BRR0 RNU6-1290P-201ENST00000362957 109 ntBASIC3.83□□□□□ -1.8
ZKSCAN3Q9BRR0 RNU6-899P-201ENST00000363947 107 ntBASIC3.83□□□□□ -1.8
ZKSCAN3Q9BRR0 Y_RNA.293-201ENST00000364908 93 ntBASIC3.83□□□□□ -1.8
ZKSCAN3Q9BRR0 Y_RNA.368-201ENST00000365547 113 ntBASIC3.83□□□□□ -1.8
ZKSCAN3Q9BRR0 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
ZKSCAN3Q9BRR0 RNU1-57P-201ENST00000384491 166 ntBASIC3.83□□□□□ -1.8
ZKSCAN3Q9BRR0 MIR184-201ENST00000384962 84 ntBASIC3.83□□□□□ -1.8
ZKSCAN3Q9BRR0 MIR626-201ENST00000385032 94 ntBASIC3.83□□□□□ -1.8
ZKSCAN3Q9BRR0 MIR569-201ENST00000385228 96 ntBASIC3.83□□□□□ -1.8
ZKSCAN3Q9BRR0 SNORA70.14-201ENST00000516205 110 ntBASIC3.83□□□□□ -1.8
ZKSCAN3Q9BRR0 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC3.83□□□□□ -1.8
ZKSCAN3Q9BRR0 MIR5680-201ENST00000577577 84 ntBASIC3.83□□□□□ -1.8
ZKSCAN3Q9BRR0 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.83□□□□□ -1.8
ZKSCAN3Q9BRR0 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.83□□□□□ -1.8
ZKSCAN3Q9BRR0 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
ZKSCAN3Q9BRR0 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
ZKSCAN3Q9BRR0 RNU6-1168P-201ENST00000390831 104 ntBASIC3.82□□□□□ -1.8
ZKSCAN3Q9BRR0 RNA5SP229-201ENST00000410809 99 ntBASIC3.82□□□□□ -1.8
ZKSCAN3Q9BRR0 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.82□□□□□ -1.8
ZKSCAN3Q9BRR0 AC021205.2-201ENST00000480069 347 ntBASIC3.82□□□□□ -1.8
ZKSCAN3Q9BRR0 AC010409.1-201ENST00000487382 476 ntBASIC3.82□□□□□ -1.8
ZKSCAN3Q9BRR0 RN7SL504P-201ENST00000494496 287 ntBASIC3.82□□□□□ -1.8
ZKSCAN3Q9BRR0 AC107027.2-201ENST00000512197 115 ntBASIC3.82□□□□□ -1.8
ZKSCAN3Q9BRR0 RPL17P51-201ENST00000605218 238 ntBASIC3.82□□□□□ -1.8
ZKSCAN3Q9BRR0 Y_RNA.802-201ENST00000614892 130 ntBASIC3.82□□□□□ -1.8
ZKSCAN3Q9BRR0 AC008873.1-201ENST00000625051 138 ntBASIC3.82□□□□□ -1.8
ZKSCAN3Q9BRR0 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
ZKSCAN3Q9BRR0 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.82□□□□□ -1.8
ZKSCAN3Q9BRR0 AF127577.6-201ENST00000623352 2191 ntBASIC3.82□□□□□ -1.8
ZKSCAN3Q9BRR0 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
ZKSCAN3Q9BRR0 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
ZKSCAN3Q9BRR0 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
ZKSCAN3Q9BRR0 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
ZKSCAN3Q9BRR0 Y_RNA.456-201ENST00000384232 111 ntBASIC3.81□□□□□ -1.8
ZKSCAN3Q9BRR0 RNU6-376P-201ENST00000384731 106 ntBASIC3.81□□□□□ -1.8
ZKSCAN3Q9BRR0 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.81□□□□□ -1.8
ZKSCAN3Q9BRR0 RNU6-855P-201ENST00000410395 104 ntBASIC3.81□□□□□ -1.8
ZKSCAN3Q9BRR0 RNU6-735P-201ENST00000410612 107 ntBASIC3.81□□□□□ -1.8
ZKSCAN3Q9BRR0 RNA5SP38-201ENST00000410750 119 ntBASIC3.81□□□□□ -1.8
ZKSCAN3Q9BRR0 SRIP1-201ENST00000489235 288 ntBASIC3.81□□□□□ -1.8
ZKSCAN3Q9BRR0 PHBP14-201ENST00000512887 367 ntBASIC3.81□□□□□ -1.8
ZKSCAN3Q9BRR0 MIR548X2-201ENST00000579776 100 ntBASIC3.81□□□□□ -1.8
ZKSCAN3Q9BRR0 MIR2682-201ENST00000580305 110 ntBASIC3.81□□□□□ -1.8
ZKSCAN3Q9BRR0 AC090616.3-201ENST00000582184 217 ntBASIC3.81□□□□□ -1.8
ZKSCAN3Q9BRR0 AL161756.2-201ENST00000604597 246 ntBASIC3.81□□□□□ -1.8
ZKSCAN3Q9BRR0 MIR3651-201ENST00000630427 90 ntBASIC3.81□□□□□ -1.8
ZKSCAN3Q9BRR0 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
ZKSCAN3Q9BRR0 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.81□□□□□ -1.8
ZKSCAN3Q9BRR0 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
ZKSCAN3Q9BRR0 AC134026.1-201ENST00000623249 2239 ntBASIC3.8□□□□□ -1.8
ZKSCAN3Q9BRR0 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
ZKSCAN3Q9BRR0 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.8□□□□□ -1.8
ZKSCAN3Q9BRR0 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.8□□□□□ -1.8
ZKSCAN3Q9BRR0 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.8□□□□□ -1.8
ZKSCAN3Q9BRR0 snoU2_19.4-201ENST00000364329 80 ntBASIC3.8□□□□□ -1.8
ZKSCAN3Q9BRR0 Y_RNA.341-201ENST00000365341 102 ntBASIC3.8□□□□□ -1.8
ZKSCAN3Q9BRR0 Y_RNA.361-201ENST00000365515 120 ntBASIC3.8□□□□□ -1.8
ZKSCAN3Q9BRR0 SNORA67.2-201ENST00000384300 149 ntBASIC3.8□□□□□ -1.8
ZKSCAN3Q9BRR0 RNU6-257P-201ENST00000410238 98 ntBASIC3.8□□□□□ -1.8
ZKSCAN3Q9BRR0 AL139281.1-201ENST00000422120 335 ntBASIC3.8□□□□□ -1.8
ZKSCAN3Q9BRR0 CST9LP2-201ENST00000437612 320 ntBASIC3.8□□□□□ -1.8
ZKSCAN3Q9BRR0 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.8□□□□□ -1.8
ZKSCAN3Q9BRR0 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.8□□□□□ -1.8
ZKSCAN3Q9BRR0 AC112771.1-201ENST00000463581 102 ntBASIC3.8□□□□□ -1.8
ZKSCAN3Q9BRR0 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.8□□□□□ -1.8
ZKSCAN3Q9BRR0 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC3.8□□□□□ -1.8
ZKSCAN3Q9BRR0 SNORA70.12-201ENST00000516084 153 ntBASIC3.8□□□□□ -1.8
ZKSCAN3Q9BRR0 HSPE1P18-201ENST00000517602 280 ntBASIC3.8□□□□□ -1.8
ZKSCAN3Q9BRR0 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.8□□□□□ -1.8
ZKSCAN3Q9BRR0 U6.115-201ENST00000636045 103 ntBASIC3.8□□□□□ -1.8
ZKSCAN3Q9BRR0 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
ZKSCAN3Q9BRR0 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
ZKSCAN3Q9BRR0 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
ZKSCAN3Q9BRR0 SNORA22C-201ENST00000384614 134 ntBASIC3.79□□□□□ -1.8
ZKSCAN3Q9BRR0 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
ZKSCAN3Q9BRR0 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC3.79□□□□□ -1.8
ZKSCAN3Q9BRR0 SNRPGP3-201ENST00000469405 227 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 156.6 ms