Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 SNORA40.19-201ENST00000390846 128 ntBASIC3.3□□□□□ -1.88
TM9SF2Q99805 RNU6-763P-201ENST00000390865 106 ntBASIC3.3□□□□□ -1.88
TM9SF2Q99805 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.3□□□□□ -1.88
TM9SF2Q99805 RNU6-855P-201ENST00000410395 104 ntBASIC3.3□□□□□ -1.88
TM9SF2Q99805 RNA5SP293-201ENST00000410527 113 ntBASIC3.3□□□□□ -1.88
TM9SF2Q99805 OOSP1P1-201ENST00000423265 274 ntBASIC3.3□□□□□ -1.88
TM9SF2Q99805 AC104619.4-201ENST00000510773 249 ntBASIC3.3□□□□□ -1.88
TM9SF2Q99805 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC3.3□□□□□ -1.88
TM9SF2Q99805 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
TM9SF2Q99805 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.3□□□□□ -1.88
TM9SF2Q99805 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
TM9SF2Q99805 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
TM9SF2Q99805 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
TM9SF2Q99805 AL513302.2-201ENST00000562313 1842 ntBASIC3.3□□□□□ -1.88
TM9SF2Q99805 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.3□□□□□ -1.88
TM9SF2Q99805 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.29□□□□□ -1.88
TM9SF2Q99805 Z82209.1-201ENST00000422141 2135 ntBASIC3.29□□□□□ -1.88
TM9SF2Q99805 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
TM9SF2Q99805 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
TM9SF2Q99805 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
TM9SF2Q99805 Y_RNA.233-201ENST00000364407 101 ntBASIC3.29□□□□□ -1.88
TM9SF2Q99805 RNA5SP51-201ENST00000364750 119 ntBASIC3.29□□□□□ -1.88
TM9SF2Q99805 RNU6-805P-201ENST00000365643 106 ntBASIC3.29□□□□□ -1.88
TM9SF2Q99805 MIR218-2-201ENST00000385006 110 ntBASIC3.29□□□□□ -1.88
TM9SF2Q99805 RNU6-918P-201ENST00000391219 106 ntBASIC3.29□□□□□ -1.88
TM9SF2Q99805 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.29□□□□□ -1.88
TM9SF2Q99805 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.29□□□□□ -1.88
TM9SF2Q99805 AC110768.1-201ENST00000509222 400 ntBASIC3.29□□□□□ -1.88
TM9SF2Q99805 HMGB3P3-201ENST00000510526 400 ntBASIC3.29□□□□□ -1.88
TM9SF2Q99805 SNORA70.12-201ENST00000516084 153 ntBASIC3.29□□□□□ -1.88
TM9SF2Q99805 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.29□□□□□ -1.88
TM9SF2Q99805 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
TM9SF2Q99805 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
TM9SF2Q99805 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC3.29□□□□□ -1.88
TM9SF2Q99805 MIR7851-201ENST00000610611 160 ntBASIC3.29□□□□□ -1.88
TM9SF2Q99805 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
TM9SF2Q99805 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
TM9SF2Q99805 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
TM9SF2Q99805 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
TM9SF2Q99805 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
TM9SF2Q99805 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
TM9SF2Q99805 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.28□□□□□ -1.88
TM9SF2Q99805 SNORD31B-201ENST00000364977 69 ntBASIC3.28□□□□□ -1.88
TM9SF2Q99805 RNU6-438P-201ENST00000365561 103 ntBASIC3.28□□□□□ -1.88
TM9SF2Q99805 DYNLT3P1-201ENST00000378574 347 ntBASIC3.28□□□□□ -1.88
TM9SF2Q99805 RNU4-61P-201ENST00000411243 107 ntBASIC3.28□□□□□ -1.88
TM9SF2Q99805 AC016717.1-201ENST00000448918 286 ntBASIC3.28□□□□□ -1.88
TM9SF2Q99805 Y_RNA.637-201ENST00000459424 114 ntBASIC3.28□□□□□ -1.88
TM9SF2Q99805 Y_RNA.662-201ENST00000516028 97 ntBASIC3.28□□□□□ -1.88
TM9SF2Q99805 AC136628.3-201ENST00000521868 290 ntBASIC3.28□□□□□ -1.88
TM9SF2Q99805 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.28□□□□□ -1.88
TM9SF2Q99805 AC018630.3-201ENST00000542637 96 ntBASIC3.28□□□□□ -1.88
TM9SF2Q99805 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.28□□□□□ -1.88
TM9SF2Q99805 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC3.28□□□□□ -1.88
TM9SF2Q99805 snoZ196.1-201ENST00000625269 89 ntBASIC3.28□□□□□ -1.88
TM9SF2Q99805 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.28□□□□□ -1.88
TM9SF2Q99805 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
TM9SF2Q99805 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.28□□□□□ -1.89
TM9SF2Q99805 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
TM9SF2Q99805 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.27□□□□□ -1.89
TM9SF2Q99805 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
TM9SF2Q99805 RNU6-743P-201ENST00000364151 106 ntBASIC3.27□□□□□ -1.89
TM9SF2Q99805 RNU6-546P-201ENST00000383991 107 ntBASIC3.27□□□□□ -1.89
TM9SF2Q99805 RNU2-32P-201ENST00000411193 191 ntBASIC3.27□□□□□ -1.89
TM9SF2Q99805 RNU6-57P-201ENST00000411348 103 ntBASIC3.27□□□□□ -1.89
TM9SF2Q99805 AL161788.1-201ENST00000441805 169 ntBASIC3.27□□□□□ -1.89
TM9SF2Q99805 CYCSP35-201ENST00000451978 304 ntBASIC3.27□□□□□ -1.89
TM9SF2Q99805 CYP2C59P-201ENST00000457790 269 ntBASIC3.27□□□□□ -1.89
TM9SF2Q99805 U8.19-201ENST00000459095 133 ntBASIC3.27□□□□□ -1.89
TM9SF2Q99805 AC080013.2-201ENST00000460866 323 ntBASIC3.27□□□□□ -1.89
TM9SF2Q99805 RN7SL442P-201ENST00000473804 320 ntBASIC3.27□□□□□ -1.89
TM9SF2Q99805 AC074198.2-201ENST00000508153 258 ntBASIC3.27□□□□□ -1.89
TM9SF2Q99805 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.27□□□□□ -1.89
TM9SF2Q99805 MIR3684-201ENST00000579779 74 ntBASIC3.27□□□□□ -1.89
TM9SF2Q99805 MIR4308-201ENST00000580634 81 ntBASIC3.27□□□□□ -1.89
TM9SF2Q99805 AC012314.7-201ENST00000619693 93 ntBASIC3.27□□□□□ -1.89
TM9SF2Q99805 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.27□□□□□ -1.89
TM9SF2Q99805 AC110774.1-201ENST00000623567 2018 ntBASIC3.27□□□□□ -1.89
TM9SF2Q99805 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
TM9SF2Q99805 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
TM9SF2Q99805 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.26□□□□□ -1.89
TM9SF2Q99805 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.26□□□□□ -1.89
TM9SF2Q99805 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.26□□□□□ -1.89
TM9SF2Q99805 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.26□□□□□ -1.89
TM9SF2Q99805 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
TM9SF2Q99805 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.26□□□□□ -1.89
TM9SF2Q99805 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
TM9SF2Q99805 SNORA63.1-201ENST00000362493 131 ntBASIC3.26□□□□□ -1.89
TM9SF2Q99805 RNU6-801P-201ENST00000364087 105 ntBASIC3.26□□□□□ -1.89
TM9SF2Q99805 SNORD46.1-201ENST00000364139 104 ntBASIC3.26□□□□□ -1.89
TM9SF2Q99805 RNA5SP42-201ENST00000364278 115 ntBASIC3.26□□□□□ -1.89
TM9SF2Q99805 Y_RNA.287-201ENST00000364853 94 ntBASIC3.26□□□□□ -1.89
TM9SF2Q99805 Y_RNA.341-201ENST00000365341 102 ntBASIC3.26□□□□□ -1.89
TM9SF2Q99805 AP002088.1-201ENST00000382740 395 ntBASIC3.26□□□□□ -1.89
TM9SF2Q99805 Y_RNA.464-201ENST00000384282 110 ntBASIC3.26□□□□□ -1.89
TM9SF2Q99805 RNU6-975P-201ENST00000384296 105 ntBASIC3.26□□□□□ -1.89
TM9SF2Q99805 AL357139.1-201ENST00000407792 426 ntBASIC3.26□□□□□ -1.89
TM9SF2Q99805 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.26□□□□□ -1.89
TM9SF2Q99805 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.26□□□□□ -1.89
TM9SF2Q99805 AL353705.1-201ENST00000433468 480 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms