Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 SNORA75.1-201ENST00000391130 148 ntBASIC-0.62□□□□□ -2.51
COL12A1Q99715 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC-0.62□□□□□ -2.51
COL12A1Q99715 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC-0.62□□□□□ -2.51
COL12A1Q99715 AC012308.1-201ENST00000451232 178 ntBASIC-0.62□□□□□ -2.51
COL12A1Q99715 SNORA13-201ENST00000458790 133 ntBASIC-0.62□□□□□ -2.51
COL12A1Q99715 AC022137.1-201ENST00000483735 151 ntBASIC-0.62□□□□□ -2.51
COL12A1Q99715 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-0.62□□□□□ -2.51
COL12A1Q99715 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC-0.62□□□□□ -2.51
COL12A1Q99715 AC090897.1-201ENST00000580909 226 ntBASIC-0.62□□□□□ -2.51
COL12A1Q99715 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-0.62□□□□□ -2.51
COL12A1Q99715 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC-0.62□□□□□ -2.51
COL12A1Q99715 U2.21-201ENST00000637295 81 ntBASIC-0.62□□□□□ -2.51
COL12A1Q99715 RNU6-502P-201ENST00000362419 108 ntBASIC-0.62□□□□□ -2.51
COL12A1Q99715 MIR548B-201ENST00000385247 97 ntBASIC-0.62□□□□□ -2.51
COL12A1Q99715 MIR1185-1-201ENST00000408598 86 ntBASIC-0.62□□□□□ -2.51
COL12A1Q99715 RNU5E-9P-201ENST00000411164 104 ntBASIC-0.62□□□□□ -2.51
COL12A1Q99715 DNAJA1P2-201ENST00000421360 1197 ntBASIC-0.62□□□□□ -2.51
COL12A1Q99715 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC-0.62□□□□□ -2.51
COL12A1Q99715 RN7SKP256-201ENST00000517201 314 ntBASIC-0.62□□□□□ -2.51
COL12A1Q99715 MIR3179-1-201ENST00000578940 84 ntBASIC-0.62□□□□□ -2.51
COL12A1Q99715 MIR3179-2-201ENST00000579107 84 ntBASIC-0.62□□□□□ -2.51
COL12A1Q99715 MIR3179-3-201ENST00000579566 84 ntBASIC-0.62□□□□□ -2.51
COL12A1Q99715 MIR3612-201ENST00000579753 87 ntBASIC-0.62□□□□□ -2.51
COL12A1Q99715 AC021851.1-201ENST00000608537 1082 ntBASIC-0.62□□□□□ -2.51
COL12A1Q99715 MIR3179-4-201ENST00000617599 84 ntBASIC-0.62□□□□□ -2.51
COL12A1Q99715 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC-0.62□□□□□ -2.51
COL12A1Q99715 AC009269.6-201ENST00000621778 588 ntBASIC-0.62□□□□□ -2.51
COL12A1Q99715 AC080188.3-201ENST00000624842 748 ntBASIC-0.62□□□□□ -2.51
COL12A1Q99715 MTND4P9-201ENST00000507819 1346 ntBASIC-0.62□□□□□ -2.51
COL12A1Q99715 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC-0.63□□□□□ -2.51
COL12A1Q99715 SNORD114-6-201ENST00000364393 72 ntBASIC-0.63□□□□□ -2.51
COL12A1Q99715 RNU6-1251P-201ENST00000364502 107 ntBASIC-0.63□□□□□ -2.51
COL12A1Q99715 RNU4-56P-201ENST00000364700 142 ntBASIC-0.63□□□□□ -2.51
COL12A1Q99715 Y_RNA.370-201ENST00000365589 108 ntBASIC-0.63□□□□□ -2.51
COL12A1Q99715 SNORA1-201ENST00000384107 130 ntBASIC-0.63□□□□□ -2.51
COL12A1Q99715 RNU6-244P-201ENST00000391028 104 ntBASIC-0.63□□□□□ -2.51
COL12A1Q99715 AL133475.1-201ENST00000404414 305 ntBASIC-0.63□□□□□ -2.51
COL12A1Q99715 MTCYBP10-201ENST00000424905 650 ntBASIC-0.63□□□□□ -2.51
COL12A1Q99715 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC-0.63□□□□□ -2.51
COL12A1Q99715 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.63□□□□□ -2.51
COL12A1Q99715 AC021146.6-201ENST00000514659 117 ntBASIC-0.63□□□□□ -2.51
COL12A1Q99715 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC-0.63□□□□□ -2.51
COL12A1Q99715 SUB1P2-201ENST00000556401 297 ntBASIC-0.63□□□□□ -2.51
COL12A1Q99715 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC-0.63□□□□□ -2.51
COL12A1Q99715 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC-0.63□□□□□ -2.51
COL12A1Q99715 SNORA36A-201ENST00000384221 132 ntBASIC-0.63□□□□□ -2.51
COL12A1Q99715 SNORD51-201ENST00000384320 80 ntBASIC-0.63□□□□□ -2.51
COL12A1Q99715 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.63□□□□□ -2.51
COL12A1Q99715 AC007327.1-201ENST00000447461 264 ntBASIC-0.63□□□□□ -2.51
COL12A1Q99715 LINC01399-202ENST00000458450 244 ntBASIC-0.63□□□□□ -2.51
COL12A1Q99715 RNA5SP484-201ENST00000458857 111 ntBASIC-0.63□□□□□ -2.51
COL12A1Q99715 AC097473.1-201ENST00000508142 408 ntBASIC-0.63□□□□□ -2.51
COL12A1Q99715 RNA5SP481-201ENST00000516814 122 ntBASIC-0.63□□□□□ -2.51
COL12A1Q99715 AC131055.1-201ENST00000584626 316 ntBASIC-0.63□□□□□ -2.51
COL12A1Q99715 AC125232.2-201ENST00000592457 143 ntBASIC-0.63□□□□□ -2.51
COL12A1Q99715 RNU6-87P-201ENST00000607561 108 ntBASIC-0.63□□□□□ -2.51
COL12A1Q99715 AC131159.1-201ENST00000621854 213 ntBASIC-0.63□□□□□ -2.51
COL12A1Q99715 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC-0.63□□□□□ -2.51
COL12A1Q99715 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-0.63□□□□□ -2.51
COL12A1Q99715 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC-0.63□□□□□ -2.51
COL12A1Q99715 Y_RNA.330-201ENST00000365230 109 ntBASIC-0.63□□□□□ -2.51
COL12A1Q99715 Y_RNA.502-201ENST00000384478 113 ntBASIC-0.63□□□□□ -2.51
COL12A1Q99715 AL034345.1-201ENST00000407768 123 ntBASIC-0.63□□□□□ -2.51
COL12A1Q99715 MIR548K-201ENST00000408406 116 ntBASIC-0.63□□□□□ -2.51
COL12A1Q99715 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC-0.63□□□□□ -2.51
COL12A1Q99715 MTND2P24-201ENST00000453434 806 ntBASIC-0.63□□□□□ -2.51
COL12A1Q99715 OR9P1P-201ENST00000496431 281 ntBASIC-0.63□□□□□ -2.51
COL12A1Q99715 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC-0.63□□□□□ -2.51
COL12A1Q99715 MIR3169-201ENST00000578032 83 ntBASIC-0.63□□□□□ -2.51
COL12A1Q99715 AL353997.4-201ENST00000586196 166 ntBASIC-0.63□□□□□ -2.51
COL12A1Q99715 Y_RNA.5-201ENST00000362334 102 ntBASIC-0.64□□□□□ -2.51
COL12A1Q99715 RNA5SP405-201ENST00000363059 114 ntBASIC-0.64□□□□□ -2.51
COL12A1Q99715 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.64□□□□□ -2.51
COL12A1Q99715 SMIM11P1-201ENST00000369586 178 ntBASIC-0.64□□□□□ -2.51
COL12A1Q99715 RNU6-1199P-201ENST00000411249 104 ntBASIC-0.64□□□□□ -2.51
COL12A1Q99715 RPL21P38-201ENST00000418090 167 ntBASIC-0.64□□□□□ -2.51
COL12A1Q99715 RPL39P39-201ENST00000455840 151 ntBASIC-0.64□□□□□ -2.51
COL12A1Q99715 RNU6-965P-201ENST00000516721 96 ntBASIC-0.64□□□□□ -2.51
COL12A1Q99715 AC079598.5-201ENST00000547460 117 ntBASIC-0.64□□□□□ -2.51
COL12A1Q99715 MIR548AO-201ENST00000579992 96 ntBASIC-0.64□□□□□ -2.51
COL12A1Q99715 AC093875.1-201ENST00000623688 504 ntBASIC-0.64□□□□□ -2.51
COL12A1Q99715 SCARNA4-202ENST00000625402 129 ntBASIC-0.64□□□□□ -2.51
COL12A1Q99715 RNU6-944P-201ENST00000364023 107 ntBASIC-0.64□□□□□ -2.51
COL12A1Q99715 RNU6-652P-201ENST00000365488 107 ntBASIC-0.64□□□□□ -2.51
COL12A1Q99715 Y_RNA.400-201ENST00000383963 111 ntBASIC-0.64□□□□□ -2.51
COL12A1Q99715 FGFR1OP2P1-201ENST00000395943 500 ntBASIC-0.64□□□□□ -2.51
COL12A1Q99715 FAM204CP-201ENST00000424489 642 ntBASIC-0.64□□□□□ -2.51
COL12A1Q99715 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC-0.64□□□□□ -2.51
COL12A1Q99715 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC-0.64□□□□□ -2.51
COL12A1Q99715 AL133217.1-201ENST00000450980 425 ntBASIC-0.64□□□□□ -2.51
COL12A1Q99715 RPL39P38-201ENST00000467018 153 ntBASIC-0.64□□□□□ -2.51
COL12A1Q99715 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC-0.64□□□□□ -2.51
COL12A1Q99715 AC113347.3-201ENST00000509113 148 ntBASIC-0.64□□□□□ -2.51
COL12A1Q99715 AC008494.2-201ENST00000514544 370 ntBASIC-0.64□□□□□ -2.51
COL12A1Q99715 AC011979.2-201ENST00000527568 352 ntBASIC-0.64□□□□□ -2.51
COL12A1Q99715 CR383656.4-201ENST00000546909 122 ntBASIC-0.64□□□□□ -2.51
COL12A1Q99715 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC-0.64□□□□□ -2.51
COL12A1Q99715 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC-0.64□□□□□ -2.51
COL12A1Q99715 AC105081.1-201ENST00000617727 106 ntBASIC-0.64□□□□□ -2.51
COL12A1Q99715 AC098679.4-201ENST00000624241 654 ntBASIC-0.64□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms