Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.18□□□□□ -2.06
NR1H4Q96RI1 SUB1P3-201ENST00000564581 315 ntBASIC2.18□□□□□ -2.06
NR1H4Q96RI1 MIR4795-201ENST00000584182 89 ntBASIC2.18□□□□□ -2.06
NR1H4Q96RI1 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.18□□□□□ -2.06
NR1H4Q96RI1 AC010999.1-201ENST00000611856 324 ntBASIC2.18□□□□□ -2.06
NR1H4Q96RI1 MIR1244-1-201ENST00000612829 85 ntBASIC2.18□□□□□ -2.06
NR1H4Q96RI1 MIR1244-3-201ENST00000635744 85 ntBASIC2.18□□□□□ -2.06
NR1H4Q96RI1 MIR1244-2-201ENST00000636449 85 ntBASIC2.18□□□□□ -2.06
NR1H4Q96RI1 MIR1244-4-202ENST00000636813 85 ntBASIC2.18□□□□□ -2.06
NR1H4Q96RI1 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
NR1H4Q96RI1 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.17□□□□□ -2.06
NR1H4Q96RI1 RNU6-490P-201ENST00000362985 107 ntBASIC2.17□□□□□ -2.06
NR1H4Q96RI1 AC004866.1-201ENST00000411748 78 ntBASIC2.17□□□□□ -2.06
NR1H4Q96RI1 Z92545.1-201ENST00000411782 234 ntBASIC2.17□□□□□ -2.06
NR1H4Q96RI1 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.17□□□□□ -2.06
NR1H4Q96RI1 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.17□□□□□ -2.06
NR1H4Q96RI1 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.17□□□□□ -2.06
NR1H4Q96RI1 AL357134.1-201ENST00000445848 426 ntBASIC2.17□□□□□ -2.06
NR1H4Q96RI1 AP001486.1-201ENST00000463339 476 ntBASIC2.17□□□□□ -2.06
NR1H4Q96RI1 AC096725.1-201ENST00000514266 313 ntBASIC2.17□□□□□ -2.06
NR1H4Q96RI1 RNU1-40P-201ENST00000516816 164 ntBASIC2.17□□□□□ -2.06
NR1H4Q96RI1 RNU1-97P-201ENST00000516872 164 ntBASIC2.17□□□□□ -2.06
NR1H4Q96RI1 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.17□□□□□ -2.06
NR1H4Q96RI1 AL590240.4-201ENST00000616908 390 ntBASIC2.17□□□□□ -2.06
NR1H4Q96RI1 AC068205.3-201ENST00000636385 468 ntBASIC2.17□□□□□ -2.06
NR1H4Q96RI1 AC245060.5-201ENST00000610778 3293 ntBASIC2.16□□□□□ -2.06
NR1H4Q96RI1 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
NR1H4Q96RI1 Y_RNA.146-201ENST00000363549 102 ntBASIC2.16□□□□□ -2.06
NR1H4Q96RI1 Y_RNA.187-201ENST00000363918 113 ntBASIC2.16□□□□□ -2.06
NR1H4Q96RI1 Y_RNA.358-201ENST00000365491 99 ntBASIC2.16□□□□□ -2.06
NR1H4Q96RI1 RNU6-1156P-201ENST00000410365 100 ntBASIC2.16□□□□□ -2.06
NR1H4Q96RI1 AC114482.1-201ENST00000418010 247 ntBASIC2.16□□□□□ -2.06
NR1H4Q96RI1 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.16□□□□□ -2.06
NR1H4Q96RI1 AC105272.1-201ENST00000438604 198 ntBASIC2.16□□□□□ -2.06
NR1H4Q96RI1 AC099799.1-201ENST00000439809 192 ntBASIC2.16□□□□□ -2.06
NR1H4Q96RI1 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.16□□□□□ -2.06
NR1H4Q96RI1 AC096638.1-201ENST00000444678 216 ntBASIC2.16□□□□□ -2.06
NR1H4Q96RI1 AC025033.1-201ENST00000463883 194 ntBASIC2.16□□□□□ -2.06
NR1H4Q96RI1 HMGN2P9-201ENST00000476875 229 ntBASIC2.16□□□□□ -2.06
NR1H4Q96RI1 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC2.16□□□□□ -2.06
NR1H4Q96RI1 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.16□□□□□ -2.06
NR1H4Q96RI1 RNU6-948P-201ENST00000516374 107 ntBASIC2.16□□□□□ -2.06
NR1H4Q96RI1 Y_RNA.683-201ENST00000516508 93 ntBASIC2.16□□□□□ -2.06
NR1H4Q96RI1 AC144568.1-201ENST00000520139 137 ntBASIC2.16□□□□□ -2.06
NR1H4Q96RI1 AC093023.1-201ENST00000547375 507 ntBASIC2.16□□□□□ -2.06
NR1H4Q96RI1 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.16□□□□□ -2.06
NR1H4Q96RI1 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
NR1H4Q96RI1 AC009487.4-201ENST00000624969 3585 ntBASIC2.16□□□□□ -2.06
NR1H4Q96RI1 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
NR1H4Q96RI1 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.15□□□□□ -2.06
NR1H4Q96RI1 AC016717.2-201ENST00000609089 5141 ntBASIC2.15□□□□□ -2.06
NR1H4Q96RI1 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
NR1H4Q96RI1 Y_RNA.58-201ENST00000362807 102 ntBASIC2.15□□□□□ -2.07
NR1H4Q96RI1 RNU6-727P-201ENST00000363592 107 ntBASIC2.15□□□□□ -2.07
NR1H4Q96RI1 Y_RNA.154-201ENST00000363624 102 ntBASIC2.15□□□□□ -2.07
NR1H4Q96RI1 RNA5SP493-201ENST00000364115 91 ntBASIC2.15□□□□□ -2.07
NR1H4Q96RI1 RNY3P1-201ENST00000365085 102 ntBASIC2.15□□□□□ -2.07
NR1H4Q96RI1 RNY3-201ENST00000365484 102 ntBASIC2.15□□□□□ -2.07
NR1H4Q96RI1 RNU6-1040P-201ENST00000383974 107 ntBASIC2.15□□□□□ -2.07
NR1H4Q96RI1 RNU6-975P-201ENST00000384296 105 ntBASIC2.15□□□□□ -2.07
NR1H4Q96RI1 MIR9-1-201ENST00000385198 89 ntBASIC2.15□□□□□ -2.07
NR1H4Q96RI1 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
NR1H4Q96RI1 SNORA69.1-201ENST00000390904 137 ntBASIC2.15□□□□□ -2.07
NR1H4Q96RI1 RNU2-52P-201ENST00000410680 190 ntBASIC2.15□□□□□ -2.07
NR1H4Q96RI1 RNA5SP450-201ENST00000411206 102 ntBASIC2.15□□□□□ -2.07
NR1H4Q96RI1 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.15□□□□□ -2.07
NR1H4Q96RI1 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.15□□□□□ -2.07
NR1H4Q96RI1 AC010531.2-201ENST00000465012 153 ntBASIC2.15□□□□□ -2.07
NR1H4Q96RI1 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.15□□□□□ -2.07
NR1H4Q96RI1 RN7SKP132-201ENST00000516001 208 ntBASIC2.15□□□□□ -2.07
NR1H4Q96RI1 MIR2355-201ENST00000517199 87 ntBASIC2.15□□□□□ -2.07
NR1H4Q96RI1 SUMO2P18-201ENST00000518873 252 ntBASIC2.15□□□□□ -2.07
NR1H4Q96RI1 CYCSP23-201ENST00000519781 313 ntBASIC2.15□□□□□ -2.07
NR1H4Q96RI1 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.15□□□□□ -2.07
NR1H4Q96RI1 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC2.15□□□□□ -2.07
NR1H4Q96RI1 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.15□□□□□ -2.07
NR1H4Q96RI1 RAB11AP2-201ENST00000545905 639 ntBASIC2.15□□□□□ -2.07
NR1H4Q96RI1 MIR3935-201ENST00000583472 104 ntBASIC2.15□□□□□ -2.07
NR1H4Q96RI1 AC080078.3-201ENST00000605407 463 ntBASIC2.15□□□□□ -2.07
NR1H4Q96RI1 AC005000.2-201ENST00000605468 310 ntBASIC2.15□□□□□ -2.07
NR1H4Q96RI1 AC008873.1-201ENST00000625051 138 ntBASIC2.15□□□□□ -2.07
NR1H4Q96RI1 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
NR1H4Q96RI1 AC008555.8-201ENST00000623602 2168 ntBASIC2.15□□□□□ -2.07
NR1H4Q96RI1 AC073544.1-201ENST00000600110 1595 ntBASIC2.15□□□□□ -2.07
NR1H4Q96RI1 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
NR1H4Q96RI1 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
NR1H4Q96RI1 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.14□□□□□ -2.07
NR1H4Q96RI1 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
NR1H4Q96RI1 RNU6-879P-201ENST00000364328 108 ntBASIC2.14□□□□□ -2.07
NR1H4Q96RI1 SNORD114-6-201ENST00000364393 72 ntBASIC2.14□□□□□ -2.07
NR1H4Q96RI1 RNU6-281P-201ENST00000384212 103 ntBASIC2.14□□□□□ -2.07
NR1H4Q96RI1 RNU6-1235P-201ENST00000384559 107 ntBASIC2.14□□□□□ -2.07
NR1H4Q96RI1 MIR597-201ENST00000384968 97 ntBASIC2.14□□□□□ -2.07
NR1H4Q96RI1 HMGN2P3-201ENST00000433603 273 ntBASIC2.14□□□□□ -2.07
NR1H4Q96RI1 HMGN2P5-201ENST00000436882 273 ntBASIC2.14□□□□□ -2.07
NR1H4Q96RI1 MTCO1P44-201ENST00000441935 243 ntBASIC2.14□□□□□ -2.07
NR1H4Q96RI1 RPL23AP7-203ENST00000449021 469 ntBASIC2.14□□□□□ -2.07
NR1H4Q96RI1 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.14□□□□□ -2.07
NR1H4Q96RI1 SNORD109B-201ENST00000458961 67 ntBASIC2.14□□□□□ -2.07
NR1H4Q96RI1 RNU7-152P-201ENST00000458982 64 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 174.6 ms