Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.66□□□□□ -1.98
SNX18Q96RF0 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.66□□□□□ -1.98
SNX18Q96RF0 UBBP3-201ENST00000445497 241 ntBASIC2.66□□□□□ -1.98
SNX18Q96RF0 S100A11P2-201ENST00000467589 312 ntBASIC2.66□□□□□ -1.98
SNX18Q96RF0 AC091179.3-201ENST00000474761 144 ntBASIC2.66□□□□□ -1.98
SNX18Q96RF0 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.66□□□□□ -1.98
SNX18Q96RF0 Y_RNA.683-201ENST00000516508 93 ntBASIC2.66□□□□□ -1.98
SNX18Q96RF0 SCARNA24.2-201ENST00000516968 130 ntBASIC2.66□□□□□ -1.98
SNX18Q96RF0 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.66□□□□□ -1.98
SNX18Q96RF0 EIF4A1P12-201ENST00000551910 141 ntBASIC2.66□□□□□ -1.98
SNX18Q96RF0 AC027176.1-201ENST00000560204 514 ntBASIC2.66□□□□□ -1.98
SNX18Q96RF0 AC007318.2-201ENST00000620999 243 ntBASIC2.66□□□□□ -1.98
SNX18Q96RF0 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.66□□□□□ -1.98
SNX18Q96RF0 AC069528.2-201ENST00000624849 1991 ntBASIC2.66□□□□□ -1.98
SNX18Q96RF0 AC096644.4-201ENST00000563417 2912 ntBASIC2.66□□□□□ -1.98
SNX18Q96RF0 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
SNX18Q96RF0 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.66□□□□□ -1.98
SNX18Q96RF0 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
SNX18Q96RF0 RNU5F-3P-201ENST00000363767 117 ntBASIC2.65□□□□□ -1.99
SNX18Q96RF0 U3.9-201ENST00000363823 204 ntBASIC2.65□□□□□ -1.99
SNX18Q96RF0 SNORA20.1-201ENST00000364790 130 ntBASIC2.65□□□□□ -1.99
SNX18Q96RF0 SNORD21-201ENST00000383953 95 ntBASIC2.65□□□□□ -1.99
SNX18Q96RF0 RNU6-793P-201ENST00000384233 104 ntBASIC2.65□□□□□ -1.99
SNX18Q96RF0 SNORD63-201ENST00000384262 68 ntBASIC2.65□□□□□ -1.99
SNX18Q96RF0 MIR320B2-201ENST00000408479 138 ntBASIC2.65□□□□□ -1.99
SNX18Q96RF0 RNU6-1328P-201ENST00000410938 106 ntBASIC2.65□□□□□ -1.99
SNX18Q96RF0 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.65□□□□□ -1.99
SNX18Q96RF0 Z96811.1-201ENST00000445880 108 ntBASIC2.65□□□□□ -1.99
SNX18Q96RF0 AC117440.1-201ENST00000474107 571 ntBASIC2.65□□□□□ -1.99
SNX18Q96RF0 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.65□□□□□ -1.99
SNX18Q96RF0 RNU6-1023P-201ENST00000516137 106 ntBASIC2.65□□□□□ -1.99
SNX18Q96RF0 RNU6-496P-201ENST00000516145 99 ntBASIC2.65□□□□□ -1.99
SNX18Q96RF0 RNU6-1338P-201ENST00000516328 91 ntBASIC2.65□□□□□ -1.99
SNX18Q96RF0 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.65□□□□□ -1.99
SNX18Q96RF0 AL356575.1-201ENST00000603008 283 ntBASIC2.65□□□□□ -1.99
SNX18Q96RF0 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
SNX18Q96RF0 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.64□□□□□ -1.99
SNX18Q96RF0 SNORD81.1-201ENST00000363064 77 ntBASIC2.64□□□□□ -1.99
SNX18Q96RF0 SNORD27-201ENST00000363981 72 ntBASIC2.64□□□□□ -1.99
SNX18Q96RF0 SNORA68.1-201ENST00000364537 132 ntBASIC2.64□□□□□ -1.99
SNX18Q96RF0 Y_RNA.257-201ENST00000364596 102 ntBASIC2.64□□□□□ -1.99
SNX18Q96RF0 Y_RNA.286-201ENST00000364813 102 ntBASIC2.64□□□□□ -1.99
SNX18Q96RF0 RNU6-245P-201ENST00000384020 107 ntBASIC2.64□□□□□ -1.99
SNX18Q96RF0 Y_RNA.462-201ENST00000384268 102 ntBASIC2.64□□□□□ -1.99
SNX18Q96RF0 SNORA54-201ENST00000384281 123 ntBASIC2.64□□□□□ -1.99
SNX18Q96RF0 MIR592-201ENST00000384959 97 ntBASIC2.64□□□□□ -1.99
SNX18Q96RF0 MIR218-1-201ENST00000384999 110 ntBASIC2.64□□□□□ -1.99
SNX18Q96RF0 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
SNX18Q96RF0 SNORA46.1-201ENST00000391069 153 ntBASIC2.64□□□□□ -1.99
SNX18Q96RF0 AC139712.2-201ENST00000424302 339 ntBASIC2.64□□□□□ -1.99
SNX18Q96RF0 AC027124.2-201ENST00000428249 105 ntBASIC2.64□□□□□ -1.99
SNX18Q96RF0 AC022018.1-201ENST00000430685 241 ntBASIC2.64□□□□□ -1.99
SNX18Q96RF0 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.64□□□□□ -1.99
SNX18Q96RF0 AC025750.2-201ENST00000442609 450 ntBASIC2.64□□□□□ -1.99
SNX18Q96RF0 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.64□□□□□ -1.99
SNX18Q96RF0 UQCRBP2-201ENST00000447827 297 ntBASIC2.64□□□□□ -1.99
SNX18Q96RF0 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.64□□□□□ -1.99
SNX18Q96RF0 HSPE1P25-201ENST00000455484 251 ntBASIC2.64□□□□□ -1.99
SNX18Q96RF0 AC008885.1-201ENST00000514930 301 ntBASIC2.64□□□□□ -1.99
SNX18Q96RF0 SNORA31.15-201ENST00000516771 132 ntBASIC2.64□□□□□ -1.99
SNX18Q96RF0 RNU7-110P-201ENST00000516891 62 ntBASIC2.64□□□□□ -1.99
SNX18Q96RF0 HSPE1P18-201ENST00000517602 280 ntBASIC2.64□□□□□ -1.99
SNX18Q96RF0 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.64□□□□□ -1.99
SNX18Q96RF0 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.64□□□□□ -1.99
SNX18Q96RF0 SNRPGP20-201ENST00000604477 205 ntBASIC2.64□□□□□ -1.99
SNX18Q96RF0 AC010900.2-201ENST00000604508 210 ntBASIC2.64□□□□□ -1.99
SNX18Q96RF0 AC090115.4-201ENST00000609970 188 ntBASIC2.64□□□□□ -1.99
SNX18Q96RF0 AC090517.3-201ENST00000625170 141 ntBASIC2.64□□□□□ -1.99
SNX18Q96RF0 AL137790.1-201ENST00000634283 177 ntBASIC2.64□□□□□ -1.99
SNX18Q96RF0 AC010329.5-201ENST00000623497 2174 ntBASIC2.64□□□□□ -1.99
SNX18Q96RF0 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
SNX18Q96RF0 SNORA9.2-201ENST00000365361 133 ntBASIC2.63□□□□□ -1.99
SNX18Q96RF0 Y_RNA.552-201ENST00000384665 112 ntBASIC2.63□□□□□ -1.99
SNX18Q96RF0 SNORA12-201ENST00000391162 147 ntBASIC2.63□□□□□ -1.99
SNX18Q96RF0 MIR1289-1-201ENST00000408836 144 ntBASIC2.63□□□□□ -1.99
SNX18Q96RF0 RNU5A-5P-201ENST00000411054 116 ntBASIC2.63□□□□□ -1.99
SNX18Q96RF0 RPL30P4-201ENST00000429309 333 ntBASIC2.63□□□□□ -1.99
SNX18Q96RF0 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.63□□□□□ -1.99
SNX18Q96RF0 AC007395.1-201ENST00000451333 677 ntBASIC2.63□□□□□ -1.99
SNX18Q96RF0 HMGB3P17-201ENST00000504195 649 ntBASIC2.63□□□□□ -1.99
SNX18Q96RF0 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.63□□□□□ -1.99
SNX18Q96RF0 SCARNA3-201ENST00000517097 143 ntBASIC2.63□□□□□ -1.99
SNX18Q96RF0 DEFB131C-201ENST00000528817 165 ntBASIC2.63□□□□□ -1.99
SNX18Q96RF0 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.63□□□□□ -1.99
SNX18Q96RF0 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.63□□□□□ -1.99
SNX18Q96RF0 MIR3199-1-201ENST00000582434 88 ntBASIC2.63□□□□□ -1.99
SNX18Q96RF0 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.63□□□□□ -1.99
SNX18Q96RF0 AC011373.1-201ENST00000607270 237 ntBASIC2.63□□□□□ -1.99
SNX18Q96RF0 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
SNX18Q96RF0 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
SNX18Q96RF0 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
SNX18Q96RF0 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.62□□□□□ -1.99
SNX18Q96RF0 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
SNX18Q96RF0 MIR335-201ENST00000362173 94 ntBASIC2.62□□□□□ -1.99
SNX18Q96RF0 Y_RNA.54-201ENST00000362766 105 ntBASIC2.62□□□□□ -1.99
SNX18Q96RF0 RNU4-90P-201ENST00000362773 141 ntBASIC2.62□□□□□ -1.99
SNX18Q96RF0 RNU1-35P-201ENST00000362782 153 ntBASIC2.62□□□□□ -1.99
SNX18Q96RF0 SNORA71.1-201ENST00000364523 117 ntBASIC2.62□□□□□ -1.99
SNX18Q96RF0 RNU6-1175P-201ENST00000365200 107 ntBASIC2.62□□□□□ -1.99
SNX18Q96RF0 RNU6-290P-201ENST00000365212 101 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms