Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 AC004866.1-201ENST00000411748 78 ntBASIC2.15□□□□□ -2.07
DUX3Q96PT4 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.15□□□□□ -2.07
DUX3Q96PT4 AIMP1P2-201ENST00000425294 312 ntBASIC2.15□□□□□ -2.07
DUX3Q96PT4 AC078809.1-201ENST00000427601 140 ntBASIC2.15□□□□□ -2.07
DUX3Q96PT4 AL139109.1-201ENST00000455491 297 ntBASIC2.15□□□□□ -2.07
DUX3Q96PT4 AC107626.1-201ENST00000471084 183 ntBASIC2.15□□□□□ -2.07
DUX3Q96PT4 RPL31P41-201ENST00000477967 372 ntBASIC2.15□□□□□ -2.07
DUX3Q96PT4 RNU6-1114P-201ENST00000516022 107 ntBASIC2.15□□□□□ -2.07
DUX3Q96PT4 SCARNA17.1-201ENST00000516211 143 ntBASIC2.15□□□□□ -2.07
DUX3Q96PT4 RNU6-1338P-201ENST00000516328 91 ntBASIC2.15□□□□□ -2.07
DUX3Q96PT4 SCARNA17.2-201ENST00000516334 143 ntBASIC2.15□□□□□ -2.07
DUX3Q96PT4 SNORA25.14-201ENST00000516481 132 ntBASIC2.15□□□□□ -2.07
DUX3Q96PT4 RNU5B-3P-201ENST00000516601 115 ntBASIC2.15□□□□□ -2.07
DUX3Q96PT4 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.15□□□□□ -2.07
DUX3Q96PT4 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.15□□□□□ -2.07
DUX3Q96PT4 MIR4672-201ENST00000583126 81 ntBASIC2.15□□□□□ -2.07
DUX3Q96PT4 AL442067.1-201ENST00000613261 223 ntBASIC2.15□□□□□ -2.07
DUX3Q96PT4 SCARNA17.4-201ENST00000614296 143 ntBASIC2.15□□□□□ -2.07
DUX3Q96PT4 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.15□□□□□ -2.07
DUX3Q96PT4 UCA1.1-201ENST00000620952 75 ntBASIC2.15□□□□□ -2.07
DUX3Q96PT4 AC243829.7-201ENST00000633081 225 ntBASIC2.15□□□□□ -2.07
DUX3Q96PT4 AC092593.1-201ENST00000515413 1815 ntBASIC2.14□□□□□ -2.07
DUX3Q96PT4 LINC02555-201ENST00000563933 1951 ntBASIC2.14□□□□□ -2.07
DUX3Q96PT4 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.14□□□□□ -2.07
DUX3Q96PT4 AL391987.6-201ENST00000305671 199 ntBASIC2.14□□□□□ -2.07
DUX3Q96PT4 AC062016.1-201ENST00000355719 319 ntBASIC2.14□□□□□ -2.07
DUX3Q96PT4 RNU1-35P-201ENST00000362782 153 ntBASIC2.14□□□□□ -2.07
DUX3Q96PT4 Y_RNA.65-201ENST00000362846 100 ntBASIC2.14□□□□□ -2.07
DUX3Q96PT4 RNU6-20P-201ENST00000384106 107 ntBASIC2.14□□□□□ -2.07
DUX3Q96PT4 RNU6-1145P-201ENST00000384246 107 ntBASIC2.14□□□□□ -2.07
DUX3Q96PT4 MIR512-1-201ENST00000384913 84 ntBASIC2.14□□□□□ -2.07
DUX3Q96PT4 MIR147B-201ENST00000390185 80 ntBASIC2.14□□□□□ -2.07
DUX3Q96PT4 MIR208B-201ENST00000401172 77 ntBASIC2.14□□□□□ -2.07
DUX3Q96PT4 AL138827.1-201ENST00000402666 306 ntBASIC2.14□□□□□ -2.07
DUX3Q96PT4 RNA5SP184-201ENST00000411071 108 ntBASIC2.14□□□□□ -2.07
DUX3Q96PT4 AC007064.1-201ENST00000412238 351 ntBASIC2.14□□□□□ -2.07
DUX3Q96PT4 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.14□□□□□ -2.07
DUX3Q96PT4 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.14□□□□□ -2.07
DUX3Q96PT4 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.14□□□□□ -2.07
DUX3Q96PT4 AC005002.2-201ENST00000438228 269 ntBASIC2.14□□□□□ -2.07
DUX3Q96PT4 AC009237.7-201ENST00000447357 229 ntBASIC2.14□□□□□ -2.07
DUX3Q96PT4 RPL39P38-201ENST00000467018 153 ntBASIC2.14□□□□□ -2.07
DUX3Q96PT4 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.14□□□□□ -2.07
DUX3Q96PT4 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.14□□□□□ -2.07
DUX3Q96PT4 RNA5SP76-201ENST00000516277 87 ntBASIC2.14□□□□□ -2.07
DUX3Q96PT4 RNU6-567P-201ENST00000516746 107 ntBASIC2.14□□□□□ -2.07
DUX3Q96PT4 DEFB131C-201ENST00000528817 165 ntBASIC2.14□□□□□ -2.07
DUX3Q96PT4 AP002001.1-203ENST00000534002 267 ntBASIC2.14□□□□□ -2.07
DUX3Q96PT4 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.14□□□□□ -2.07
DUX3Q96PT4 AC025281.1-201ENST00000567026 265 ntBASIC2.14□□□□□ -2.07
DUX3Q96PT4 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
DUX3Q96PT4 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.14□□□□□ -2.07
DUX3Q96PT4 ZNF861P-201ENST00000588126 639 ntBASIC2.14□□□□□ -2.07
DUX3Q96PT4 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.14□□□□□ -2.07
DUX3Q96PT4 AC023043.3-201ENST00000593113 385 ntBASIC2.14□□□□□ -2.07
DUX3Q96PT4 Y_RNA.772-201ENST00000606692 102 ntBASIC2.14□□□□□ -2.07
DUX3Q96PT4 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.14□□□□□ -2.07
DUX3Q96PT4 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.14□□□□□ -2.07
DUX3Q96PT4 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.13□□□□□ -2.07
DUX3Q96PT4 SNORA20.1-201ENST00000364790 130 ntBASIC2.13□□□□□ -2.07
DUX3Q96PT4 Y_RNA.462-201ENST00000384268 102 ntBASIC2.13□□□□□ -2.07
DUX3Q96PT4 Y_RNA.489-201ENST00000384410 101 ntBASIC2.13□□□□□ -2.07
DUX3Q96PT4 MIR767-201ENST00000390228 109 ntBASIC2.13□□□□□ -2.07
DUX3Q96PT4 SNORA26.3-201ENST00000391119 136 ntBASIC2.13□□□□□ -2.07
DUX3Q96PT4 RNU6-1328P-201ENST00000410938 106 ntBASIC2.13□□□□□ -2.07
DUX3Q96PT4 Z82209.1-201ENST00000422141 2135 ntBASIC2.13□□□□□ -2.07
DUX3Q96PT4 AL358075.3-201ENST00000426289 226 ntBASIC2.13□□□□□ -2.07
DUX3Q96PT4 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.13□□□□□ -2.07
DUX3Q96PT4 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.13□□□□□ -2.07
DUX3Q96PT4 AL109933.2-201ENST00000452651 260 ntBASIC2.13□□□□□ -2.07
DUX3Q96PT4 MRPS36P2-201ENST00000512569 299 ntBASIC2.13□□□□□ -2.07
DUX3Q96PT4 SNORA40.9-201ENST00000515895 93 ntBASIC2.13□□□□□ -2.07
DUX3Q96PT4 RNU6-496P-201ENST00000516145 99 ntBASIC2.13□□□□□ -2.07
DUX3Q96PT4 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.13□□□□□ -2.07
DUX3Q96PT4 AC021231.3-201ENST00000558497 370 ntBASIC2.13□□□□□ -2.07
DUX3Q96PT4 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.13□□□□□ -2.07
DUX3Q96PT4 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.13□□□□□ -2.07
DUX3Q96PT4 AL109918.3-201ENST00000603072 338 ntBASIC2.13□□□□□ -2.07
DUX3Q96PT4 AL391813.1-201ENST00000603098 260 ntBASIC2.13□□□□□ -2.07
DUX3Q96PT4 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.13□□□□□ -2.07
DUX3Q96PT4 AC137590.2-201ENST00000619709 240 ntBASIC2.13□□□□□ -2.07
DUX3Q96PT4 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
DUX3Q96PT4 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
DUX3Q96PT4 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
DUX3Q96PT4 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
DUX3Q96PT4 AC096644.4-201ENST00000563417 2912 ntBASIC2.12□□□□□ -2.07
DUX3Q96PT4 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
DUX3Q96PT4 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
DUX3Q96PT4 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.12□□□□□ -2.07
DUX3Q96PT4 AC092268.1-201ENST00000342691 405 ntBASIC2.12□□□□□ -2.07
DUX3Q96PT4 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
DUX3Q96PT4 RNU6-1159P-201ENST00000362933 107 ntBASIC2.12□□□□□ -2.07
DUX3Q96PT4 Y_RNA.101-201ENST00000363154 102 ntBASIC2.12□□□□□ -2.07
DUX3Q96PT4 Y_RNA.269-201ENST00000364685 89 ntBASIC2.12□□□□□ -2.07
DUX3Q96PT4 SNORD88.1-201ENST00000408684 91 ntBASIC2.12□□□□□ -2.07
DUX3Q96PT4 AL451074.5-201ENST00000415894 435 ntBASIC2.12□□□□□ -2.07
DUX3Q96PT4 AL445687.1-201ENST00000439946 251 ntBASIC2.12□□□□□ -2.07
DUX3Q96PT4 AC091179.3-201ENST00000474761 144 ntBASIC2.12□□□□□ -2.07
DUX3Q96PT4 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.12□□□□□ -2.07
DUX3Q96PT4 MIR449C-201ENST00000516047 92 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 239.4 ms