Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 RNA5SP20-201ENST00000515976 84 ntBASIC3.98□□□□□ -1.77
CALR3Q96L12 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.98□□□□□ -1.77
CALR3Q96L12 AC106785.1-201ENST00000565935 262 ntBASIC3.98□□□□□ -1.77
CALR3Q96L12 MIR4738-201ENST00000579134 87 ntBASIC3.98□□□□□ -1.77
CALR3Q96L12 MIR4744-201ENST00000581563 82 ntBASIC3.98□□□□□ -1.77
CALR3Q96L12 AC004832.4-201ENST00000608952 331 ntBASIC3.98□□□□□ -1.77
CALR3Q96L12 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.98□□□□□ -1.77
CALR3Q96L12 AC112484.5-201ENST00000624189 228 ntBASIC3.98□□□□□ -1.77
CALR3Q96L12 AC068647.2-201ENST00000637380 353 ntBASIC3.98□□□□□ -1.77
CALR3Q96L12 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
CALR3Q96L12 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
CALR3Q96L12 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CALR3Q96L12 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
CALR3Q96L12 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CALR3Q96L12 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CALR3Q96L12 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
CALR3Q96L12 Y_RNA.24-201ENST00000362508 103 ntBASIC3.97□□□□□ -1.77
CALR3Q96L12 RNU1-23P-201ENST00000363361 144 ntBASIC3.97□□□□□ -1.77
CALR3Q96L12 RNU6-275P-201ENST00000364910 107 ntBASIC3.97□□□□□ -1.77
CALR3Q96L12 Y_RNA.357-201ENST00000365487 109 ntBASIC3.97□□□□□ -1.77
CALR3Q96L12 SNORA48.8-201ENST00000391324 134 ntBASIC3.97□□□□□ -1.77
CALR3Q96L12 RPS26P8-201ENST00000393490 348 ntBASIC3.97□□□□□ -1.77
CALR3Q96L12 U3.39-201ENST00000408569 239 ntBASIC3.97□□□□□ -1.77
CALR3Q96L12 SNORA3.3-201ENST00000408712 125 ntBASIC3.97□□□□□ -1.77
CALR3Q96L12 RPL36AP21-201ENST00000490372 323 ntBASIC3.97□□□□□ -1.77
CALR3Q96L12 MRPL49P2-201ENST00000521066 465 ntBASIC3.97□□□□□ -1.77
CALR3Q96L12 AC027419.1-201ENST00000522976 328 ntBASIC3.97□□□□□ -1.77
CALR3Q96L12 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.97□□□□□ -1.77
CALR3Q96L12 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
CALR3Q96L12 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.97□□□□□ -1.77
CALR3Q96L12 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
CALR3Q96L12 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
CALR3Q96L12 PWAR6-201ENST00000552334 4618 ntBASIC3.96□□□□□ -1.78
CALR3Q96L12 RNU6-743P-201ENST00000364151 106 ntBASIC3.96□□□□□ -1.78
CALR3Q96L12 snoU2_19.4-201ENST00000364329 80 ntBASIC3.96□□□□□ -1.78
CALR3Q96L12 U8.7-201ENST00000364940 136 ntBASIC3.96□□□□□ -1.78
CALR3Q96L12 RNU6-1240P-201ENST00000365155 104 ntBASIC3.96□□□□□ -1.78
CALR3Q96L12 SNORA62-201ENST00000365493 153 ntBASIC3.96□□□□□ -1.78
CALR3Q96L12 SNORA57.3-201ENST00000411095 141 ntBASIC3.96□□□□□ -1.78
CALR3Q96L12 AC010154.1-201ENST00000425857 269 ntBASIC3.96□□□□□ -1.78
CALR3Q96L12 TRIAP1P1-201ENST00000427062 225 ntBASIC3.96□□□□□ -1.78
CALR3Q96L12 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.96□□□□□ -1.78
CALR3Q96L12 AL137159.1-201ENST00000452808 512 ntBASIC3.96□□□□□ -1.78
CALR3Q96L12 AC010618.1-201ENST00000469924 477 ntBASIC3.96□□□□□ -1.78
CALR3Q96L12 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.96□□□□□ -1.78
CALR3Q96L12 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.96□□□□□ -1.78
CALR3Q96L12 RNA5SP208-201ENST00000516156 78 ntBASIC3.96□□□□□ -1.78
CALR3Q96L12 RNU6-346P-201ENST00000516288 111 ntBASIC3.96□□□□□ -1.78
CALR3Q96L12 RNU7-115P-201ENST00000516433 55 ntBASIC3.96□□□□□ -1.78
CALR3Q96L12 AC008011.1-201ENST00000545989 227 ntBASIC3.96□□□□□ -1.78
CALR3Q96L12 ARF4P1-201ENST00000605447 541 ntBASIC3.96□□□□□ -1.78
CALR3Q96L12 AC090115.4-201ENST00000609970 188 ntBASIC3.96□□□□□ -1.78
CALR3Q96L12 RMST_8.1-201ENST00000610287 165 ntBASIC3.96□□□□□ -1.78
CALR3Q96L12 MIR548AY-201ENST00000617669 107 ntBASIC3.96□□□□□ -1.78
CALR3Q96L12 MTND1P7-201ENST00000632801 297 ntBASIC3.96□□□□□ -1.78
CALR3Q96L12 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CALR3Q96L12 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.96□□□□□ -1.78
CALR3Q96L12 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.95□□□□□ -1.78
CALR3Q96L12 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CALR3Q96L12 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.95□□□□□ -1.78
CALR3Q96L12 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.95□□□□□ -1.78
CALR3Q96L12 SNORD116-13-201ENST00000384408 92 ntBASIC3.95□□□□□ -1.78
CALR3Q96L12 SNORA19-201ENST00000384737 128 ntBASIC3.95□□□□□ -1.78
CALR3Q96L12 MIR613-201ENST00000385248 95 ntBASIC3.95□□□□□ -1.78
CALR3Q96L12 GOT2P5-201ENST00000433995 546 ntBASIC3.95□□□□□ -1.78
CALR3Q96L12 SEPT7P4-201ENST00000437076 306 ntBASIC3.95□□□□□ -1.78
CALR3Q96L12 AC010531.2-201ENST00000465012 153 ntBASIC3.95□□□□□ -1.78
CALR3Q96L12 AC117454.1-201ENST00000491120 168 ntBASIC3.95□□□□□ -1.78
CALR3Q96L12 AC092185.1-201ENST00000491371 97 ntBASIC3.95□□□□□ -1.78
CALR3Q96L12 RNU6-579P-201ENST00000516879 102 ntBASIC3.95□□□□□ -1.78
CALR3Q96L12 PRELID2P1-201ENST00000552837 301 ntBASIC3.95□□□□□ -1.78
CALR3Q96L12 MIR4724-201ENST00000579485 89 ntBASIC3.95□□□□□ -1.78
CALR3Q96L12 AC006130.2-201ENST00000586202 326 ntBASIC3.95□□□□□ -1.78
CALR3Q96L12 AL355297.2-201ENST00000604792 129 ntBASIC3.95□□□□□ -1.78
CALR3Q96L12 RNU6-969P-201ENST00000383900 105 ntBASIC3.94□□□□□ -1.78
CALR3Q96L12 RNU6-220P-201ENST00000390919 107 ntBASIC3.94□□□□□ -1.78
CALR3Q96L12 RNU6-578P-201ENST00000390980 103 ntBASIC3.94□□□□□ -1.78
CALR3Q96L12 EBAG9P1-201ENST00000418955 543 ntBASIC3.94□□□□□ -1.78
CALR3Q96L12 TMSB4XP3-201ENST00000445144 114 ntBASIC3.94□□□□□ -1.78
CALR3Q96L12 AL357134.1-201ENST00000445848 426 ntBASIC3.94□□□□□ -1.78
CALR3Q96L12 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.94□□□□□ -1.78
CALR3Q96L12 AC093259.1-201ENST00000509755 300 ntBASIC3.94□□□□□ -1.78
CALR3Q96L12 AC025884.1-201ENST00000556034 378 ntBASIC3.94□□□□□ -1.78
CALR3Q96L12 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC3.94□□□□□ -1.78
CALR3Q96L12 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC3.94□□□□□ -1.78
CALR3Q96L12 MIR3616-201ENST00000584070 92 ntBASIC3.94□□□□□ -1.78
CALR3Q96L12 AP003357.1-201ENST00000604497 148 ntBASIC3.94□□□□□ -1.78
CALR3Q96L12 MIR6716-201ENST00000613413 80 ntBASIC3.94□□□□□ -1.78
CALR3Q96L12 MIR7641-1-201ENST00000627518 61 ntBASIC3.94□□□□□ -1.78
CALR3Q96L12 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CALR3Q96L12 AL356292.1-201ENST00000283110 373 ntBASIC3.93□□□□□ -1.78
CALR3Q96L12 MIR367-201ENST00000362299 68 ntBASIC3.93□□□□□ -1.78
CALR3Q96L12 RNU4-84P-201ENST00000364200 139 ntBASIC3.93□□□□□ -1.78
CALR3Q96L12 SNORD116-18-201ENST00000383961 92 ntBASIC3.93□□□□□ -1.78
CALR3Q96L12 RNU6-1323P-201ENST00000384025 107 ntBASIC3.93□□□□□ -1.78
CALR3Q96L12 Y_RNA.572-201ENST00000384757 98 ntBASIC3.93□□□□□ -1.78
CALR3Q96L12 MIR561-201ENST00000385216 97 ntBASIC3.93□□□□□ -1.78
CALR3Q96L12 MIR616-201ENST00000385293 97 ntBASIC3.93□□□□□ -1.78
CALR3Q96L12 AC123900.1-201ENST00000420390 96 ntBASIC3.93□□□□□ -1.78
CALR3Q96L12 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms