Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 MIR5194-201ENST00000582634 120 ntBASIC2.66□□□□□ -1.98
VPS50Q96JG6 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.66□□□□□ -1.98
VPS50Q96JG6 BX322639.1-202ENST00000423987 2213 ntBASIC2.66□□□□□ -1.98
VPS50Q96JG6 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
VPS50Q96JG6 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.98
VPS50Q96JG6 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.65□□□□□ -1.99
VPS50Q96JG6 MIR26A1-201ENST00000362205 77 ntBASIC2.65□□□□□ -1.99
VPS50Q96JG6 Y_RNA.105-201ENST00000363182 111 ntBASIC2.65□□□□□ -1.99
VPS50Q96JG6 SNORA18.2-201ENST00000383865 132 ntBASIC2.65□□□□□ -1.99
VPS50Q96JG6 Y_RNA.526-201ENST00000384572 110 ntBASIC2.65□□□□□ -1.99
VPS50Q96JG6 RNU6-1072P-201ENST00000384703 107 ntBASIC2.65□□□□□ -1.99
VPS50Q96JG6 RNU6-443P-201ENST00000384780 107 ntBASIC2.65□□□□□ -1.99
VPS50Q96JG6 RNU6-1109P-201ENST00000391187 107 ntBASIC2.65□□□□□ -1.99
VPS50Q96JG6 RPL21P1-201ENST00000399532 476 ntBASIC2.65□□□□□ -1.99
VPS50Q96JG6 SNORA11.2-201ENST00000408318 127 ntBASIC2.65□□□□□ -1.99
VPS50Q96JG6 SNORD12B-201ENST00000410433 91 ntBASIC2.65□□□□□ -1.99
VPS50Q96JG6 Y_RNA.597-201ENST00000410463 100 ntBASIC2.65□□□□□ -1.99
VPS50Q96JG6 AC112220.1-201ENST00000434628 355 ntBASIC2.65□□□□□ -1.99
VPS50Q96JG6 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.65□□□□□ -1.99
VPS50Q96JG6 AC003982.1-202ENST00000469928 248 ntBASIC2.65□□□□□ -1.99
VPS50Q96JG6 AC023141.11-201ENST00000508864 202 ntBASIC2.65□□□□□ -1.99
VPS50Q96JG6 MIR449C-201ENST00000516047 92 ntBASIC2.65□□□□□ -1.99
VPS50Q96JG6 RNU6-1198P-201ENST00000516904 67 ntBASIC2.65□□□□□ -1.99
VPS50Q96JG6 RNU1-104P-201ENST00000517280 175 ntBASIC2.65□□□□□ -1.99
VPS50Q96JG6 AC091144.1-201ENST00000519573 138 ntBASIC2.65□□□□□ -1.99
VPS50Q96JG6 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.65□□□□□ -1.99
VPS50Q96JG6 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC2.65□□□□□ -1.99
VPS50Q96JG6 AC023824.2-201ENST00000566185 400 ntBASIC2.65□□□□□ -1.99
VPS50Q96JG6 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.65□□□□□ -1.99
VPS50Q96JG6 MIR3605-201ENST00000583214 100 ntBASIC2.65□□□□□ -1.99
VPS50Q96JG6 MZT1P2-201ENST00000604387 248 ntBASIC2.65□□□□□ -1.99
VPS50Q96JG6 AL670379.2-201ENST00000604983 252 ntBASIC2.65□□□□□ -1.99
VPS50Q96JG6 AL357075.2-201ENST00000614906 189 ntBASIC2.65□□□□□ -1.99
VPS50Q96JG6 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.65□□□□□ -1.99
VPS50Q96JG6 Y_RNA.144-201ENST00000363521 113 ntBASIC2.64□□□□□ -1.99
VPS50Q96JG6 SNORA38-201ENST00000363946 132 ntBASIC2.64□□□□□ -1.99
VPS50Q96JG6 Y_RNA.222-201ENST00000364264 102 ntBASIC2.64□□□□□ -1.99
VPS50Q96JG6 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
VPS50Q96JG6 U6atac.2-201ENST00000408644 118 ntBASIC2.64□□□□□ -1.99
VPS50Q96JG6 RNA5SP181-201ENST00000410246 98 ntBASIC2.64□□□□□ -1.99
VPS50Q96JG6 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.64□□□□□ -1.99
VPS50Q96JG6 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.64□□□□□ -1.99
VPS50Q96JG6 MTCYBP9-201ENST00000431021 303 ntBASIC2.64□□□□□ -1.99
VPS50Q96JG6 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.64□□□□□ -1.99
VPS50Q96JG6 DYNLT3P2-201ENST00000442517 295 ntBASIC2.64□□□□□ -1.99
VPS50Q96JG6 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.64□□□□□ -1.99
VPS50Q96JG6 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.64□□□□□ -1.99
VPS50Q96JG6 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.64□□□□□ -1.99
VPS50Q96JG6 AC067942.3-201ENST00000512025 362 ntBASIC2.64□□□□□ -1.99
VPS50Q96JG6 RNA5SP82-201ENST00000516707 92 ntBASIC2.64□□□□□ -1.99
VPS50Q96JG6 RNA5SP402-201ENST00000517148 110 ntBASIC2.64□□□□□ -1.99
VPS50Q96JG6 MIR4659A-201ENST00000580269 81 ntBASIC2.64□□□□□ -1.99
VPS50Q96JG6 AC069294.1-201ENST00000608397 350 ntBASIC2.64□□□□□ -1.99
VPS50Q96JG6 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.64□□□□□ -1.99
VPS50Q96JG6 AC240442.1-201ENST00000616055 283 ntBASIC2.64□□□□□ -1.99
VPS50Q96JG6 MIR7157-201ENST00000635801 60 ntBASIC2.64□□□□□ -1.99
VPS50Q96JG6 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
VPS50Q96JG6 AC092593.1-201ENST00000515413 1815 ntBASIC2.63□□□□□ -1.99
VPS50Q96JG6 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
VPS50Q96JG6 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.63□□□□□ -1.99
VPS50Q96JG6 RNU6-859P-201ENST00000362728 107 ntBASIC2.63□□□□□ -1.99
VPS50Q96JG6 Y_RNA.64-201ENST00000362845 102 ntBASIC2.63□□□□□ -1.99
VPS50Q96JG6 RNU6-727P-201ENST00000363592 107 ntBASIC2.63□□□□□ -1.99
VPS50Q96JG6 SNORD32B-201ENST00000364460 84 ntBASIC2.63□□□□□ -1.99
VPS50Q96JG6 RNU6-1145P-201ENST00000384246 107 ntBASIC2.63□□□□□ -1.99
VPS50Q96JG6 Y_RNA.574-201ENST00000384766 95 ntBASIC2.63□□□□□ -1.99
VPS50Q96JG6 MIR196B-201ENST00000384852 84 ntBASIC2.63□□□□□ -1.99
VPS50Q96JG6 RNU6-220P-201ENST00000390919 107 ntBASIC2.63□□□□□ -1.99
VPS50Q96JG6 AL079342.1-201ENST00000401460 267 ntBASIC2.63□□□□□ -1.99
VPS50Q96JG6 RNU2-20P-201ENST00000410425 191 ntBASIC2.63□□□□□ -1.99
VPS50Q96JG6 AC004386.2-201ENST00000441858 148 ntBASIC2.63□□□□□ -1.99
VPS50Q96JG6 AC073910.1-201ENST00000445047 438 ntBASIC2.63□□□□□ -1.99
VPS50Q96JG6 FCF1P4-201ENST00000448326 183 ntBASIC2.63□□□□□ -1.99
VPS50Q96JG6 AC091179.3-201ENST00000474761 144 ntBASIC2.63□□□□□ -1.99
VPS50Q96JG6 MTCO2P24-201ENST00000515611 426 ntBASIC2.63□□□□□ -1.99
VPS50Q96JG6 SNORA31.11-201ENST00000516528 139 ntBASIC2.63□□□□□ -1.99
VPS50Q96JG6 RN7SKP49-201ENST00000516675 260 ntBASIC2.63□□□□□ -1.99
VPS50Q96JG6 MIR4503-201ENST00000582187 83 ntBASIC2.63□□□□□ -1.99
VPS50Q96JG6 MIR4658-201ENST00000584344 65 ntBASIC2.63□□□□□ -1.99
VPS50Q96JG6 AL121655.1-201ENST00000605811 308 ntBASIC2.63□□□□□ -1.99
VPS50Q96JG6 AC010999.1-201ENST00000611856 324 ntBASIC2.63□□□□□ -1.99
VPS50Q96JG6 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.63□□□□□ -1.99
VPS50Q96JG6 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.63□□□□□ -1.99
VPS50Q96JG6 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
VPS50Q96JG6 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
VPS50Q96JG6 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.62□□□□□ -1.99
VPS50Q96JG6 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.62□□□□□ -1.99
VPS50Q96JG6 RNU6-280P-201ENST00000364145 104 ntBASIC2.62□□□□□ -1.99
VPS50Q96JG6 SNORA63.7-201ENST00000365579 123 ntBASIC2.62□□□□□ -1.99
VPS50Q96JG6 SNORD78.2-201ENST00000391076 69 ntBASIC2.62□□□□□ -1.99
VPS50Q96JG6 RNU6-121P-201ENST00000410525 99 ntBASIC2.62□□□□□ -1.99
VPS50Q96JG6 RNA5SP21-201ENST00000410917 96 ntBASIC2.62□□□□□ -1.99
VPS50Q96JG6 AC007064.1-201ENST00000412238 351 ntBASIC2.62□□□□□ -1.99
VPS50Q96JG6 SDAD1P3-201ENST00000427380 333 ntBASIC2.62□□□□□ -1.99
VPS50Q96JG6 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.62□□□□□ -1.99
VPS50Q96JG6 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.62□□□□□ -1.99
VPS50Q96JG6 AC096725.1-201ENST00000514266 313 ntBASIC2.62□□□□□ -1.99
VPS50Q96JG6 RNY3P15-201ENST00000516297 97 ntBASIC2.62□□□□□ -1.99
VPS50Q96JG6 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.62□□□□□ -1.99
VPS50Q96JG6 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 173.2 ms