Protein–RNA interactions for Protein: Q96AJ9

VTI1A, Vesicle transport through interaction with t-SNAREs homolog 1A, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1AQ96AJ9 RPS20P10-201ENST00000451209 253 ntBASIC4.07□□□□□ -1.76
VTI1AQ96AJ9 RPL36AP48-201ENST00000485521 314 ntBASIC4.07□□□□□ -1.76
VTI1AQ96AJ9 AC006445.1-201ENST00000491925 405 ntBASIC4.07□□□□□ -1.76
VTI1AQ96AJ9 AC005840.1-201ENST00000498412 377 ntBASIC4.07□□□□□ -1.76
VTI1AQ96AJ9 RNU6ATAC13P-201ENST00000516152 131 ntBASIC4.07□□□□□ -1.76
VTI1AQ96AJ9 RNU4ATAC15P-201ENST00000516415 126 ntBASIC4.07□□□□□ -1.76
VTI1AQ96AJ9 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC4.07□□□□□ -1.76
VTI1AQ96AJ9 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC4.07□□□□□ -1.76
VTI1AQ96AJ9 AC107294.3-201ENST00000609211 526 ntBASIC4.07□□□□□ -1.76
VTI1AQ96AJ9 AC008873.1-201ENST00000625051 138 ntBASIC4.07□□□□□ -1.76
VTI1AQ96AJ9 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.07□□□□□ -1.76
VTI1AQ96AJ9 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
VTI1AQ96AJ9 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC4.07□□□□□ -1.76
VTI1AQ96AJ9 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
VTI1AQ96AJ9 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4.06□□□□□ -1.76
VTI1AQ96AJ9 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
VTI1AQ96AJ9 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
VTI1AQ96AJ9 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
VTI1AQ96AJ9 Y_RNA.215-201ENST00000364204 112 ntBASIC4.06□□□□□ -1.76
VTI1AQ96AJ9 Y_RNA.287-201ENST00000364853 94 ntBASIC4.06□□□□□ -1.76
VTI1AQ96AJ9 Y_RNA.343-201ENST00000365354 112 ntBASIC4.06□□□□□ -1.76
VTI1AQ96AJ9 Y_RNA.361-201ENST00000365515 120 ntBASIC4.06□□□□□ -1.76
VTI1AQ96AJ9 RNU6-1117P-201ENST00000384525 104 ntBASIC4.06□□□□□ -1.76
VTI1AQ96AJ9 RNU6ATAC10P-201ENST00000408635 111 ntBASIC4.06□□□□□ -1.76
VTI1AQ96AJ9 Y_RNA.797-201ENST00000515977 94 ntBASIC4.06□□□□□ -1.76
VTI1AQ96AJ9 MIR2114-201ENST00000516645 80 ntBASIC4.06□□□□□ -1.76
VTI1AQ96AJ9 SNORA70.18-201ENST00000516696 98 ntBASIC4.06□□□□□ -1.76
VTI1AQ96AJ9 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC4.06□□□□□ -1.76
VTI1AQ96AJ9 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.06□□□□□ -1.76
VTI1AQ96AJ9 AC069294.1-201ENST00000608397 350 ntBASIC4.06□□□□□ -1.76
VTI1AQ96AJ9 AC099778.2-201ENST00000610904 211 ntBASIC4.06□□□□□ -1.76
VTI1AQ96AJ9 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.06□□□□□ -1.76
VTI1AQ96AJ9 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.06□□□□□ -1.76
VTI1AQ96AJ9 AP000553.6-201ENST00000641242 118 ntBASIC4.06□□□□□ -1.76
VTI1AQ96AJ9 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC4.06□□□□□ -1.76
VTI1AQ96AJ9 AC026241.1-201ENST00000517873 2142 ntBASIC4.06□□□□□ -1.76
VTI1AQ96AJ9 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC4.05□□□□□ -1.76
VTI1AQ96AJ9 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
VTI1AQ96AJ9 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
VTI1AQ96AJ9 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
VTI1AQ96AJ9 U3.8-201ENST00000363675 217 ntBASIC4.05□□□□□ -1.76
VTI1AQ96AJ9 Y_RNA.368-201ENST00000365547 113 ntBASIC4.05□□□□□ -1.76
VTI1AQ96AJ9 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC4.05□□□□□ -1.76
VTI1AQ96AJ9 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.05□□□□□ -1.76
VTI1AQ96AJ9 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC4.05□□□□□ -1.76
VTI1AQ96AJ9 MIR3186-201ENST00000577404 85 ntBASIC4.05□□□□□ -1.76
VTI1AQ96AJ9 AC090616.3-201ENST00000582184 217 ntBASIC4.05□□□□□ -1.76
VTI1AQ96AJ9 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
VTI1AQ96AJ9 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
VTI1AQ96AJ9 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.05□□□□□ -1.76
VTI1AQ96AJ9 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
VTI1AQ96AJ9 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
VTI1AQ96AJ9 AC007496.3-201ENST00000624987 3443 ntBASIC4.04□□□□□ -1.76
VTI1AQ96AJ9 RNU6-151P-201ENST00000364158 107 ntBASIC4.04□□□□□ -1.76
VTI1AQ96AJ9 Y_RNA.310-201ENST00000365063 113 ntBASIC4.04□□□□□ -1.76
VTI1AQ96AJ9 RNU6-959P-201ENST00000384671 107 ntBASIC4.04□□□□□ -1.76
VTI1AQ96AJ9 MIR626-201ENST00000385032 94 ntBASIC4.04□□□□□ -1.76
VTI1AQ96AJ9 RNU6-855P-201ENST00000410395 104 ntBASIC4.04□□□□□ -1.76
VTI1AQ96AJ9 AC006989.1-201ENST00000427212 131 ntBASIC4.04□□□□□ -1.76
VTI1AQ96AJ9 KRTAP13-6P-201ENST00000508999 371 ntBASIC4.04□□□□□ -1.76
VTI1AQ96AJ9 RNA5SP272-201ENST00000516095 111 ntBASIC4.04□□□□□ -1.76
VTI1AQ96AJ9 RN7SKP164-201ENST00000516138 266 ntBASIC4.04□□□□□ -1.76
VTI1AQ96AJ9 RNU2-27P-201ENST00000516185 142 ntBASIC4.04□□□□□ -1.76
VTI1AQ96AJ9 RNU6-426P-201ENST00000516464 97 ntBASIC4.04□□□□□ -1.76
VTI1AQ96AJ9 uc_338.14-201ENST00000613162 166 ntBASIC4.04□□□□□ -1.76
VTI1AQ96AJ9 Y_RNA.778-201ENST00000620203 90 ntBASIC4.04□□□□□ -1.76
VTI1AQ96AJ9 AP003122.5-201ENST00000527668 3766 ntBASIC4.04□□□□□ -1.76
VTI1AQ96AJ9 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
VTI1AQ96AJ9 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
VTI1AQ96AJ9 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
VTI1AQ96AJ9 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
VTI1AQ96AJ9 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC4.03□□□□□ -1.76
VTI1AQ96AJ9 RNU4-35P-201ENST00000362588 141 ntBASIC4.03□□□□□ -1.76
VTI1AQ96AJ9 RNU1-33P-201ENST00000364249 162 ntBASIC4.03□□□□□ -1.76
VTI1AQ96AJ9 Y_RNA.293-201ENST00000364908 93 ntBASIC4.03□□□□□ -1.76
VTI1AQ96AJ9 RNA5SP354-201ENST00000391247 136 ntBASIC4.03□□□□□ -1.76
VTI1AQ96AJ9 RNU6-710P-201ENST00000410424 105 ntBASIC4.03□□□□□ -1.76
VTI1AQ96AJ9 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC4.03□□□□□ -1.76
VTI1AQ96AJ9 Z98742.2-201ENST00000431564 187 ntBASIC4.03□□□□□ -1.76
VTI1AQ96AJ9 CR769767.1-201ENST00000436337 346 ntBASIC4.03□□□□□ -1.76
VTI1AQ96AJ9 AC008155.2-201ENST00000464337 397 ntBASIC4.03□□□□□ -1.76
VTI1AQ96AJ9 AC006483.1-201ENST00000487308 313 ntBASIC4.03□□□□□ -1.76
VTI1AQ96AJ9 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC4.03□□□□□ -1.76
VTI1AQ96AJ9 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
VTI1AQ96AJ9 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
VTI1AQ96AJ9 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
VTI1AQ96AJ9 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
VTI1AQ96AJ9 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
VTI1AQ96AJ9 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC4.02□□□□□ -1.77
VTI1AQ96AJ9 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
VTI1AQ96AJ9 SNORD32B-201ENST00000364460 84 ntBASIC4.02□□□□□ -1.77
VTI1AQ96AJ9 Y_RNA.341-201ENST00000365341 102 ntBASIC4.02□□□□□ -1.77
VTI1AQ96AJ9 RNU6-22P-201ENST00000384355 107 ntBASIC4.02□□□□□ -1.77
VTI1AQ96AJ9 MIR569-201ENST00000385228 96 ntBASIC4.02□□□□□ -1.77
VTI1AQ96AJ9 RNU6-578P-201ENST00000390980 103 ntBASIC4.02□□□□□ -1.77
VTI1AQ96AJ9 RNU6-239P-201ENST00000390990 99 ntBASIC4.02□□□□□ -1.77
VTI1AQ96AJ9 RNU2-51P-201ENST00000410708 197 ntBASIC4.02□□□□□ -1.77
VTI1AQ96AJ9 EBAG9P1-201ENST00000418955 543 ntBASIC4.02□□□□□ -1.77
VTI1AQ96AJ9 AC005326.1-201ENST00000429197 123 ntBASIC4.02□□□□□ -1.77
VTI1AQ96AJ9 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms