Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.04□□□□□ -1.76
HPS1Q92902 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
HPS1Q92902 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HPS1Q92902 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HPS1Q92902 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
HPS1Q92902 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.03□□□□□ -1.76
HPS1Q92902 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HPS1Q92902 Y_RNA.10-201ENST00000362371 110 ntBASIC4.03□□□□□ -1.76
HPS1Q92902 RNA5SP388-201ENST00000362584 119 ntBASIC4.03□□□□□ -1.76
HPS1Q92902 Y_RNA.298-201ENST00000364960 107 ntBASIC4.03□□□□□ -1.76
HPS1Q92902 RNU1-89P-201ENST00000384592 164 ntBASIC4.03□□□□□ -1.76
HPS1Q92902 SDHCP2-201ENST00000398565 501 ntBASIC4.03□□□□□ -1.76
HPS1Q92902 AC096949.1-201ENST00000412047 152 ntBASIC4.03□□□□□ -1.76
HPS1Q92902 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.03□□□□□ -1.76
HPS1Q92902 RPL23AP52-201ENST00000439311 478 ntBASIC4.03□□□□□ -1.76
HPS1Q92902 AL162591.2-201ENST00000449634 317 ntBASIC4.03□□□□□ -1.76
HPS1Q92902 AC084357.1-201ENST00000473404 255 ntBASIC4.03□□□□□ -1.76
HPS1Q92902 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.03□□□□□ -1.76
HPS1Q92902 RNU7-61P-201ENST00000515897 61 ntBASIC4.03□□□□□ -1.76
HPS1Q92902 AC011604.1-201ENST00000545978 196 ntBASIC4.03□□□□□ -1.76
HPS1Q92902 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.03□□□□□ -1.76
HPS1Q92902 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.03□□□□□ -1.76
HPS1Q92902 MIR5699-201ENST00000578903 90 ntBASIC4.03□□□□□ -1.76
HPS1Q92902 MIR4753-201ENST00000585119 83 ntBASIC4.03□□□□□ -1.76
HPS1Q92902 HOTTIP_4.1-201ENST00000618195 165 ntBASIC4.03□□□□□ -1.76
HPS1Q92902 MIR7703-201ENST00000620784 77 ntBASIC4.03□□□□□ -1.76
HPS1Q92902 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HPS1Q92902 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.03□□□□□ -1.76
HPS1Q92902 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.03□□□□□ -1.77
HPS1Q92902 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
HPS1Q92902 OR56B2P-202ENST00000641377 2453 ntBASIC4.02□□□□□ -1.77
HPS1Q92902 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC4.02□□□□□ -1.77
HPS1Q92902 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC4.02□□□□□ -1.77
HPS1Q92902 snoU2_19.1-201ENST00000362361 80 ntBASIC4.02□□□□□ -1.77
HPS1Q92902 RNU6-1099P-201ENST00000363533 107 ntBASIC4.02□□□□□ -1.77
HPS1Q92902 RNU6-776P-201ENST00000364403 104 ntBASIC4.02□□□□□ -1.77
HPS1Q92902 SNORD32B-201ENST00000364460 84 ntBASIC4.02□□□□□ -1.77
HPS1Q92902 SNORA71.2-201ENST00000364941 134 ntBASIC4.02□□□□□ -1.77
HPS1Q92902 RNU6-1022P-201ENST00000365049 104 ntBASIC4.02□□□□□ -1.77
HPS1Q92902 RNU6-690P-201ENST00000365242 106 ntBASIC4.02□□□□□ -1.77
HPS1Q92902 SNORA70F-201ENST00000384142 135 ntBASIC4.02□□□□□ -1.77
HPS1Q92902 RNU6-975P-201ENST00000384296 105 ntBASIC4.02□□□□□ -1.77
HPS1Q92902 RNU1-44P-201ENST00000384453 163 ntBASIC4.02□□□□□ -1.77
HPS1Q92902 MIR1183-201ENST00000408856 89 ntBASIC4.02□□□□□ -1.77
HPS1Q92902 MRPS17P9-201ENST00000511924 393 ntBASIC4.02□□□□□ -1.77
HPS1Q92902 RNU6-1018P-201ENST00000516577 106 ntBASIC4.02□□□□□ -1.77
HPS1Q92902 MIR3163-201ENST00000581592 73 ntBASIC4.02□□□□□ -1.77
HPS1Q92902 MIR5197-201ENST00000583721 112 ntBASIC4.02□□□□□ -1.77
HPS1Q92902 AC091178.1-203ENST00000584586 279 ntBASIC4.02□□□□□ -1.77
HPS1Q92902 AL022401.1-201ENST00000619498 108 ntBASIC4.02□□□□□ -1.77
HPS1Q92902 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HPS1Q92902 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HPS1Q92902 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.02□□□□□ -1.77
HPS1Q92902 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.02□□□□□ -1.77
HPS1Q92902 AC010680.1-201ENST00000590024 3590 ntBASIC4.02□□□□□ -1.77
HPS1Q92902 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
HPS1Q92902 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HPS1Q92902 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
HPS1Q92902 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HPS1Q92902 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
HPS1Q92902 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.01□□□□□ -1.77
HPS1Q92902 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HPS1Q92902 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
HPS1Q92902 RNA5SP151-201ENST00000365632 117 ntBASIC4.01□□□□□ -1.77
HPS1Q92902 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
HPS1Q92902 RNU6-816P-201ENST00000390914 107 ntBASIC4.01□□□□□ -1.77
HPS1Q92902 RNA5SP332-201ENST00000391063 115 ntBASIC4.01□□□□□ -1.77
HPS1Q92902 RNU6-1268P-201ENST00000391214 107 ntBASIC4.01□□□□□ -1.77
HPS1Q92902 RNU6-1239P-201ENST00000391310 107 ntBASIC4.01□□□□□ -1.77
HPS1Q92902 RPL18P10-201ENST00000425606 538 ntBASIC4.01□□□□□ -1.77
HPS1Q92902 RPL30P4-201ENST00000429309 333 ntBASIC4.01□□□□□ -1.77
HPS1Q92902 AC091390.1-201ENST00000433904 331 ntBASIC4.01□□□□□ -1.77
HPS1Q92902 AL353689.1-201ENST00000438895 199 ntBASIC4.01□□□□□ -1.77
HPS1Q92902 RNU6ATAC12P-201ENST00000516542 115 ntBASIC4.01□□□□□ -1.77
HPS1Q92902 AL110118.1-201ENST00000553543 400 ntBASIC4.01□□□□□ -1.77
HPS1Q92902 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.01□□□□□ -1.77
HPS1Q92902 AC021443.1-201ENST00000604478 211 ntBASIC4.01□□□□□ -1.77
HPS1Q92902 U7.3-201ENST00000616123 62 ntBASIC4.01□□□□□ -1.77
HPS1Q92902 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.01□□□□□ -1.77
HPS1Q92902 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HPS1Q92902 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.01□□□□□ -1.77
HPS1Q92902 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4□□□□□ -1.77
HPS1Q92902 RNU6-349P-201ENST00000362402 107 ntBASIC4□□□□□ -1.77
HPS1Q92902 SNORD113.2-201ENST00000364166 89 ntBASIC4□□□□□ -1.77
HPS1Q92902 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
HPS1Q92902 Y_RNA.437-201ENST00000384113 113 ntBASIC4□□□□□ -1.77
HPS1Q92902 MIR548A2-201ENST00000384956 97 ntBASIC4□□□□□ -1.77
HPS1Q92902 RN7SKP177-201ENST00000410567 355 ntBASIC4□□□□□ -1.77
HPS1Q92902 RNU6-57P-201ENST00000411348 103 ntBASIC4□□□□□ -1.77
HPS1Q92902 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4□□□□□ -1.77
HPS1Q92902 NDUFA4P2-201ENST00000489989 244 ntBASIC4□□□□□ -1.77
HPS1Q92902 RN7SKP282-201ENST00000516824 299 ntBASIC4□□□□□ -1.77
HPS1Q92902 SUMO2P16-201ENST00000519475 264 ntBASIC4□□□□□ -1.77
HPS1Q92902 HMGN2P15-201ENST00000585707 270 ntBASIC4□□□□□ -1.77
HPS1Q92902 AC009487.4-201ENST00000624969 3585 ntBASIC4□□□□□ -1.77
HPS1Q92902 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.99□□□□□ -1.77
HPS1Q92902 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.99□□□□□ -1.77
HPS1Q92902 RNU1-57P-201ENST00000384491 166 ntBASIC3.99□□□□□ -1.77
HPS1Q92902 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
HPS1Q92902 RNU1-82P-201ENST00000390851 165 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 177.7 ms