Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 RNU6-700P-201ENST00000391043 107 ntBASIC2.36□□□□□ -2.03
SNED1Q8TER0 AL627390.1-201ENST00000396055 340 ntBASIC2.36□□□□□ -2.03
SNED1Q8TER0 MTCO3P19-201ENST00000415864 321 ntBASIC2.36□□□□□ -2.03
SNED1Q8TER0 AC007098.1-201ENST00000420122 367 ntBASIC2.36□□□□□ -2.03
SNED1Q8TER0 AC007919.1-201ENST00000429380 217 ntBASIC2.36□□□□□ -2.03
SNED1Q8TER0 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.36□□□□□ -2.03
SNED1Q8TER0 AL160314.1-201ENST00000490836 438 ntBASIC2.36□□□□□ -2.03
SNED1Q8TER0 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.36□□□□□ -2.03
SNED1Q8TER0 RNU6-397P-201ENST00000516226 104 ntBASIC2.36□□□□□ -2.03
SNED1Q8TER0 SNORA40.15-201ENST00000516884 107 ntBASIC2.36□□□□□ -2.03
SNED1Q8TER0 AC004584.2-201ENST00000570407 410 ntBASIC2.36□□□□□ -2.03
SNED1Q8TER0 MIR3117-201ENST00000584034 78 ntBASIC2.36□□□□□ -2.03
SNED1Q8TER0 AL159153.1-201ENST00000619688 317 ntBASIC2.36□□□□□ -2.03
SNED1Q8TER0 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.36□□□□□ -2.03
SNED1Q8TER0 U6.104-201ENST00000637979 90 ntBASIC2.36□□□□□ -2.03
SNED1Q8TER0 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.36□□□□□ -2.03
SNED1Q8TER0 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.35□□□□□ -2.03
SNED1Q8TER0 Y_RNA.19-201ENST00000362462 99 ntBASIC2.35□□□□□ -2.03
SNED1Q8TER0 Y_RNA.26-201ENST00000362539 101 ntBASIC2.35□□□□□ -2.03
SNED1Q8TER0 RNU4-50P-201ENST00000364361 141 ntBASIC2.35□□□□□ -2.03
SNED1Q8TER0 Y_RNA.245-201ENST00000364493 95 ntBASIC2.35□□□□□ -2.03
SNED1Q8TER0 RNU6-806P-201ENST00000365147 105 ntBASIC2.35□□□□□ -2.03
SNED1Q8TER0 RNU6-827P-201ENST00000365553 106 ntBASIC2.35□□□□□ -2.03
SNED1Q8TER0 SNORA69.1-201ENST00000390904 137 ntBASIC2.35□□□□□ -2.03
SNED1Q8TER0 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.35□□□□□ -2.03
SNED1Q8TER0 SNORD56-201ENST00000413522 71 ntBASIC2.35□□□□□ -2.03
SNED1Q8TER0 RPL23AP7-203ENST00000449021 469 ntBASIC2.35□□□□□ -2.03
SNED1Q8TER0 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.35□□□□□ -2.03
SNED1Q8TER0 U8.21-201ENST00000459536 136 ntBASIC2.35□□□□□ -2.03
SNED1Q8TER0 Y_RNA.680-201ENST00000516441 93 ntBASIC2.35□□□□□ -2.03
SNED1Q8TER0 AC025755.1-201ENST00000521306 278 ntBASIC2.35□□□□□ -2.03
SNED1Q8TER0 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.35□□□□□ -2.03
SNED1Q8TER0 MIR3128-201ENST00000581957 66 ntBASIC2.35□□□□□ -2.03
SNED1Q8TER0 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.35□□□□□ -2.03
SNED1Q8TER0 ZNF299P-201ENST00000406845 1804 ntBASIC2.35□□□□□ -2.03
SNED1Q8TER0 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
SNED1Q8TER0 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.03
SNED1Q8TER0 RNU6-461P-201ENST00000364195 107 ntBASIC2.34□□□□□ -2.03
SNED1Q8TER0 Y_RNA.276-201ENST00000364732 109 ntBASIC2.34□□□□□ -2.03
SNED1Q8TER0 SNORA20.1-201ENST00000364790 130 ntBASIC2.34□□□□□ -2.03
SNED1Q8TER0 Y_RNA.483-201ENST00000384380 101 ntBASIC2.34□□□□□ -2.03
SNED1Q8TER0 MIR499A-201ENST00000384903 122 ntBASIC2.34□□□□□ -2.03
SNED1Q8TER0 AC019129.1-201ENST00000403786 261 ntBASIC2.34□□□□□ -2.03
SNED1Q8TER0 RNU4-62P-201ENST00000410125 130 ntBASIC2.34□□□□□ -2.03
SNED1Q8TER0 BTF3P4-201ENST00000418852 495 ntBASIC2.34□□□□□ -2.03
SNED1Q8TER0 SUMO1P4-201ENST00000429430 302 ntBASIC2.34□□□□□ -2.03
SNED1Q8TER0 RPL26P9-201ENST00000457466 433 ntBASIC2.34□□□□□ -2.03
SNED1Q8TER0 RNA5SP290-201ENST00000517133 127 ntBASIC2.34□□□□□ -2.03
SNED1Q8TER0 RNU6-897P-201ENST00000517135 105 ntBASIC2.34□□□□□ -2.03
SNED1Q8TER0 SCARNA11.3-201ENST00000517276 130 ntBASIC2.34□□□□□ -2.03
SNED1Q8TER0 AC084851.1-201ENST00000529105 249 ntBASIC2.34□□□□□ -2.03
SNED1Q8TER0 AC103996.1-201ENST00000555468 102 ntBASIC2.34□□□□□ -2.03
SNED1Q8TER0 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.03
SNED1Q8TER0 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.34□□□□□ -2.03
SNED1Q8TER0 MIR5696-201ENST00000578474 85 ntBASIC2.34□□□□□ -2.03
SNED1Q8TER0 RAC1P9-201ENST00000604990 392 ntBASIC2.34□□□□□ -2.03
SNED1Q8TER0 AC004805.2-201ENST00000605382 482 ntBASIC2.34□□□□□ -2.03
SNED1Q8TER0 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.03
SNED1Q8TER0 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.34□□□□□ -2.03
SNED1Q8TER0 AC141273.2-201ENST00000618989 130 ntBASIC2.34□□□□□ -2.03
SNED1Q8TER0 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.34□□□□□ -2.03
SNED1Q8TER0 MTND5P9-201ENST00000503854 1755 ntBASIC2.34□□□□□ -2.03
SNED1Q8TER0 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
SNED1Q8TER0 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
SNED1Q8TER0 MIR378A-201ENST00000362177 66 ntBASIC2.34□□□□□ -2.04
SNED1Q8TER0 Y_RNA.14-201ENST00000362415 103 ntBASIC2.34□□□□□ -2.04
SNED1Q8TER0 Y_RNA.116-201ENST00000363292 103 ntBASIC2.34□□□□□ -2.04
SNED1Q8TER0 RNU6-595P-201ENST00000363944 107 ntBASIC2.34□□□□□ -2.04
SNED1Q8TER0 RNA5SP160-201ENST00000364866 120 ntBASIC2.34□□□□□ -2.04
SNED1Q8TER0 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.34□□□□□ -2.04
SNED1Q8TER0 Y_RNA.471-201ENST00000384312 102 ntBASIC2.34□□□□□ -2.04
SNED1Q8TER0 Y_RNA.477-201ENST00000384352 108 ntBASIC2.34□□□□□ -2.04
SNED1Q8TER0 MIR628-201ENST00000385229 95 ntBASIC2.34□□□□□ -2.04
SNED1Q8TER0 Y_RNA.623-201ENST00000411128 95 ntBASIC2.34□□□□□ -2.04
SNED1Q8TER0 AP1B1P2-201ENST00000416196 106 ntBASIC2.34□□□□□ -2.04
SNED1Q8TER0 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.34□□□□□ -2.04
SNED1Q8TER0 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.34□□□□□ -2.04
SNED1Q8TER0 FCF1P4-201ENST00000448326 183 ntBASIC2.34□□□□□ -2.04
SNED1Q8TER0 NDUFB1P2-201ENST00000449477 176 ntBASIC2.34□□□□□ -2.04
SNED1Q8TER0 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.34□□□□□ -2.04
SNED1Q8TER0 AK3P2-201ENST00000507976 429 ntBASIC2.34□□□□□ -2.04
SNED1Q8TER0 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.34□□□□□ -2.04
SNED1Q8TER0 RNU6-250P-201ENST00000516958 103 ntBASIC2.34□□□□□ -2.04
SNED1Q8TER0 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.34□□□□□ -2.04
SNED1Q8TER0 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.34□□□□□ -2.04
SNED1Q8TER0 NACAP3-201ENST00000552100 481 ntBASIC2.34□□□□□ -2.04
SNED1Q8TER0 AC090517.1-201ENST00000569307 266 ntBASIC2.34□□□□□ -2.04
SNED1Q8TER0 HMGN2P15-201ENST00000585707 270 ntBASIC2.34□□□□□ -2.04
SNED1Q8TER0 AC009314.1-201ENST00000603871 304 ntBASIC2.34□□□□□ -2.04
SNED1Q8TER0 AC096772.1-201ENST00000609146 564 ntBASIC2.34□□□□□ -2.04
SNED1Q8TER0 MIR8076-201ENST00000611401 83 ntBASIC2.34□□□□□ -2.04
SNED1Q8TER0 MIR7515-201ENST00000637837 67 ntBASIC2.34□□□□□ -2.04
SNED1Q8TER0 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.33□□□□□ -2.04
SNED1Q8TER0 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.33□□□□□ -2.04
SNED1Q8TER0 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
SNED1Q8TER0 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
SNED1Q8TER0 AC010329.5-201ENST00000623497 2174 ntBASIC2.33□□□□□ -2.04
SNED1Q8TER0 VTRNA1-1-201ENST00000363120 99 ntBASIC2.33□□□□□ -2.04
SNED1Q8TER0 MIR10A-201ENST00000385043 110 ntBASIC2.33□□□□□ -2.04
SNED1Q8TER0 MIR518E-201ENST00000385252 88 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms