Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
SHKBP1Q8TBC3 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SHKBP1Q8TBC3 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SHKBP1Q8TBC3 EI24P2-201ENST00000397776 1076 ntBASIC3.66□□□□□ -1.82
SHKBP1Q8TBC3 AC012308.1-201ENST00000451232 178 ntBASIC3.66□□□□□ -1.82
SHKBP1Q8TBC3 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.66□□□□□ -1.82
SHKBP1Q8TBC3 RN7SL807P-201ENST00000470923 297 ntBASIC3.66□□□□□ -1.82
SHKBP1Q8TBC3 AC093663.1-201ENST00000497190 394 ntBASIC3.66□□□□□ -1.82
SHKBP1Q8TBC3 AIG1P1-201ENST00000503376 148 ntBASIC3.66□□□□□ -1.82
SHKBP1Q8TBC3 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.66□□□□□ -1.82
SHKBP1Q8TBC3 Y_RNA.692-201ENST00000516627 105 ntBASIC3.66□□□□□ -1.82
SHKBP1Q8TBC3 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.66□□□□□ -1.82
SHKBP1Q8TBC3 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.66□□□□□ -1.82
SHKBP1Q8TBC3 AC005000.2-201ENST00000605468 310 ntBASIC3.66□□□□□ -1.82
SHKBP1Q8TBC3 RMST_8.1-201ENST00000610287 165 ntBASIC3.66□□□□□ -1.82
SHKBP1Q8TBC3 U6.115-201ENST00000636045 103 ntBASIC3.66□□□□□ -1.82
SHKBP1Q8TBC3 AC068205.3-201ENST00000636385 468 ntBASIC3.66□□□□□ -1.82
SHKBP1Q8TBC3 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SHKBP1Q8TBC3 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
SHKBP1Q8TBC3 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.66□□□□□ -1.82
SHKBP1Q8TBC3 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SHKBP1Q8TBC3 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.66□□□□□ -1.82
SHKBP1Q8TBC3 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.65□□□□□ -1.82
SHKBP1Q8TBC3 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
SHKBP1Q8TBC3 SNORD45.3-201ENST00000363836 72 ntBASIC3.65□□□□□ -1.83
SHKBP1Q8TBC3 RNU6-1164P-201ENST00000364428 107 ntBASIC3.65□□□□□ -1.83
SHKBP1Q8TBC3 RNU6-32P-201ENST00000383948 107 ntBASIC3.65□□□□□ -1.83
SHKBP1Q8TBC3 SNORA20B-201ENST00000384220 132 ntBASIC3.65□□□□□ -1.83
SHKBP1Q8TBC3 RNU6-13P-201ENST00000384248 107 ntBASIC3.65□□□□□ -1.83
SHKBP1Q8TBC3 RNU6-12P-201ENST00000384604 107 ntBASIC3.65□□□□□ -1.83
SHKBP1Q8TBC3 RNU6-41P-201ENST00000384741 107 ntBASIC3.65□□□□□ -1.83
SHKBP1Q8TBC3 MIR493-201ENST00000385254 89 ntBASIC3.65□□□□□ -1.83
SHKBP1Q8TBC3 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.65□□□□□ -1.83
SHKBP1Q8TBC3 RN7SKP284-201ENST00000411002 343 ntBASIC3.65□□□□□ -1.83
SHKBP1Q8TBC3 Z92545.1-201ENST00000411782 234 ntBASIC3.65□□□□□ -1.83
SHKBP1Q8TBC3 TOMM22P2-201ENST00000430735 237 ntBASIC3.65□□□□□ -1.83
SHKBP1Q8TBC3 HMGN2P10-201ENST00000448085 265 ntBASIC3.65□□□□□ -1.83
SHKBP1Q8TBC3 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.65□□□□□ -1.83
SHKBP1Q8TBC3 RNU6-579P-201ENST00000516879 102 ntBASIC3.65□□□□□ -1.83
SHKBP1Q8TBC3 RNU6-1231P-201ENST00000517185 103 ntBASIC3.65□□□□□ -1.83
SHKBP1Q8TBC3 IGKV2-26-201ENST00000518305 343 ntBASIC3.65□□□□□ -1.83
SHKBP1Q8TBC3 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.65□□□□□ -1.83
SHKBP1Q8TBC3 AC133485.4-201ENST00000561835 220 ntBASIC3.65□□□□□ -1.83
SHKBP1Q8TBC3 AC138907.4-201ENST00000570107 226 ntBASIC3.65□□□□□ -1.83
SHKBP1Q8TBC3 MIR3923-201ENST00000579521 83 ntBASIC3.65□□□□□ -1.83
SHKBP1Q8TBC3 AC099778.2-201ENST00000610904 211 ntBASIC3.65□□□□□ -1.83
SHKBP1Q8TBC3 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SHKBP1Q8TBC3 AC002543.1-201ENST00000299783 1954 ntBASIC3.64□□□□□ -1.83
SHKBP1Q8TBC3 U8.1-201ENST00000362843 134 ntBASIC3.64□□□□□ -1.83
SHKBP1Q8TBC3 RNU6-1336P-201ENST00000383886 109 ntBASIC3.64□□□□□ -1.83
SHKBP1Q8TBC3 AC245047.4-201ENST00000433189 144 ntBASIC3.64□□□□□ -1.83
SHKBP1Q8TBC3 NDUFB4P6-201ENST00000436819 366 ntBASIC3.64□□□□□ -1.83
SHKBP1Q8TBC3 RNU5F-2P-201ENST00000516066 82 ntBASIC3.64□□□□□ -1.83
SHKBP1Q8TBC3 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.64□□□□□ -1.83
SHKBP1Q8TBC3 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.64□□□□□ -1.83
SHKBP1Q8TBC3 MIR378D2-201ENST00000580636 98 ntBASIC3.64□□□□□ -1.83
SHKBP1Q8TBC3 AL031274.2-201ENST00000599419 203 ntBASIC3.64□□□□□ -1.83
SHKBP1Q8TBC3 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.64□□□□□ -1.83
SHKBP1Q8TBC3 YPEL5P2-201ENST00000605553 359 ntBASIC3.64□□□□□ -1.83
SHKBP1Q8TBC3 AC025754.2-201ENST00000606491 432 ntBASIC3.64□□□□□ -1.83
SHKBP1Q8TBC3 MIR7112-201ENST00000616126 65 ntBASIC3.64□□□□□ -1.83
SHKBP1Q8TBC3 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.64□□□□□ -1.83
SHKBP1Q8TBC3 OTUD4P1-201ENST00000237841 3067 ntBASIC3.64□□□□□ -1.83
SHKBP1Q8TBC3 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
SHKBP1Q8TBC3 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SHKBP1Q8TBC3 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SHKBP1Q8TBC3 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SHKBP1Q8TBC3 RNU1-75P-201ENST00000347264 129 ntBASIC3.63□□□□□ -1.83
SHKBP1Q8TBC3 MIR450A1-201ENST00000362262 91 ntBASIC3.63□□□□□ -1.83
SHKBP1Q8TBC3 Y_RNA.114-201ENST00000363265 113 ntBASIC3.63□□□□□ -1.83
SHKBP1Q8TBC3 AP002088.1-201ENST00000382740 395 ntBASIC3.63□□□□□ -1.83
SHKBP1Q8TBC3 MIR124-3-201ENST00000384866 87 ntBASIC3.63□□□□□ -1.83
SHKBP1Q8TBC3 MIR548A3-201ENST00000385297 97 ntBASIC3.63□□□□□ -1.83
SHKBP1Q8TBC3 MIR1278-201ENST00000408753 81 ntBASIC3.63□□□□□ -1.83
SHKBP1Q8TBC3 RNA5SP201-201ENST00000410316 124 ntBASIC3.63□□□□□ -1.83
SHKBP1Q8TBC3 Y_RNA.622-201ENST00000411091 108 ntBASIC3.63□□□□□ -1.83
SHKBP1Q8TBC3 CYCSP48-201ENST00000417124 323 ntBASIC3.63□□□□□ -1.83
SHKBP1Q8TBC3 Z82209.1-201ENST00000422141 2135 ntBASIC3.63□□□□□ -1.83
SHKBP1Q8TBC3 SNORD108-201ENST00000459332 71 ntBASIC3.63□□□□□ -1.83
SHKBP1Q8TBC3 RPS29P24-201ENST00000486345 171 ntBASIC3.63□□□□□ -1.83
SHKBP1Q8TBC3 RNU6-1061P-201ENST00000516530 99 ntBASIC3.63□□□□□ -1.83
SHKBP1Q8TBC3 ACA59.2-201ENST00000517061 156 ntBASIC3.63□□□□□ -1.83
SHKBP1Q8TBC3 AC018692.3-201ENST00000623929 123 ntBASIC3.63□□□□□ -1.83
SHKBP1Q8TBC3 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.63□□□□□ -1.83
SHKBP1Q8TBC3 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC3.62□□□□□ -1.83
SHKBP1Q8TBC3 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SHKBP1Q8TBC3 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
SHKBP1Q8TBC3 AC138915.1-201ENST00000565427 1685 ntBASIC3.62□□□□□ -1.83
SHKBP1Q8TBC3 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC3.62□□□□□ -1.83
SHKBP1Q8TBC3 Y_RNA.120-201ENST00000363304 110 ntBASIC3.62□□□□□ -1.83
SHKBP1Q8TBC3 SNORD58C-201ENST00000365223 64 ntBASIC3.62□□□□□ -1.83
SHKBP1Q8TBC3 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.62□□□□□ -1.83
SHKBP1Q8TBC3 AC006028.1-201ENST00000438379 402 ntBASIC3.62□□□□□ -1.83
SHKBP1Q8TBC3 AC004386.2-201ENST00000441858 148 ntBASIC3.62□□□□□ -1.83
SHKBP1Q8TBC3 SNRPGP8-201ENST00000454064 226 ntBASIC3.62□□□□□ -1.83
SHKBP1Q8TBC3 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC3.62□□□□□ -1.83
SHKBP1Q8TBC3 S100A11P1-201ENST00000477525 312 ntBASIC3.62□□□□□ -1.83
SHKBP1Q8TBC3 RPS29P20-201ENST00000489592 171 ntBASIC3.62□□□□□ -1.83
SHKBP1Q8TBC3 RNU1-117P-201ENST00000517041 158 ntBASIC3.62□□□□□ -1.83
SHKBP1Q8TBC3 AC093331.1-201ENST00000521474 169 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 139.1 ms