Protein–RNA interactions for Protein: Q8NAV1

PRPF38A, Pre-mRNA-splicing factor 38A, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38AQ8NAV1 AC026271.5-201ENST00000577873 130 ntBASIC3.01□□□□□ -1.93
PRPF38AQ8NAV1 AL356055.1-201ENST00000602528 446 ntBASIC3.01□□□□□ -1.93
PRPF38AQ8NAV1 SNORD11B-201ENST00000607707 90 ntBASIC3.01□□□□□ -1.93
PRPF38AQ8NAV1 MIR4272-201ENST00000635924 64 ntBASIC3.01□□□□□ -1.93
PRPF38AQ8NAV1 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
PRPF38AQ8NAV1 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.01□□□□□ -1.93
PRPF38AQ8NAV1 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
PRPF38AQ8NAV1 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
PRPF38AQ8NAV1 RNU6-438P-201ENST00000365561 103 ntBASIC3□□□□□ -1.93
PRPF38AQ8NAV1 XGY1-201ENST00000381172 446 ntBASIC3□□□□□ -1.93
PRPF38AQ8NAV1 MIR27B-201ENST00000385129 97 ntBASIC3□□□□□ -1.93
PRPF38AQ8NAV1 RNA5SP213-201ENST00000391031 106 ntBASIC3□□□□□ -1.93
PRPF38AQ8NAV1 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
PRPF38AQ8NAV1 AC074290.1-201ENST00000448883 135 ntBASIC3□□□□□ -1.93
PRPF38AQ8NAV1 AC245102.2-201ENST00000448956 180 ntBASIC3□□□□□ -1.93
PRPF38AQ8NAV1 Y_RNA.683-201ENST00000516508 93 ntBASIC3□□□□□ -1.93
PRPF38AQ8NAV1 SNORA40.14-201ENST00000516543 86 ntBASIC3□□□□□ -1.93
PRPF38AQ8NAV1 Y_RNA.711-201ENST00000516993 102 ntBASIC3□□□□□ -1.93
PRPF38AQ8NAV1 RNA5SP490-201ENST00000517141 136 ntBASIC3□□□□□ -1.93
PRPF38AQ8NAV1 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC3□□□□□ -1.93
PRPF38AQ8NAV1 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC3□□□□□ -1.93
PRPF38AQ8NAV1 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3□□□□□ -1.93
PRPF38AQ8NAV1 AC006600.1-201ENST00000572529 153 ntBASIC3□□□□□ -1.93
PRPF38AQ8NAV1 MIR3126-201ENST00000577443 74 ntBASIC3□□□□□ -1.93
PRPF38AQ8NAV1 MIR5194-201ENST00000582634 120 ntBASIC3□□□□□ -1.93
PRPF38AQ8NAV1 MIR3171-201ENST00000584270 74 ntBASIC3□□□□□ -1.93
PRPF38AQ8NAV1 AC022202.1-201ENST00000613515 211 ntBASIC3□□□□□ -1.93
PRPF38AQ8NAV1 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.99□□□□□ -1.93
PRPF38AQ8NAV1 SNORD31B-201ENST00000364977 69 ntBASIC2.99□□□□□ -1.93
PRPF38AQ8NAV1 AC007064.1-201ENST00000412238 351 ntBASIC2.99□□□□□ -1.93
PRPF38AQ8NAV1 AC009963.1-201ENST00000417265 157 ntBASIC2.99□□□□□ -1.93
PRPF38AQ8NAV1 PMCHL1-202ENST00000423102 261 ntBASIC2.99□□□□□ -1.93
PRPF38AQ8NAV1 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.99□□□□□ -1.93
PRPF38AQ8NAV1 MTCYBP6-201ENST00000441810 138 ntBASIC2.99□□□□□ -1.93
PRPF38AQ8NAV1 MTND4P19-201ENST00000446659 478 ntBASIC2.99□□□□□ -1.93
PRPF38AQ8NAV1 AC114982.1-201ENST00000469402 321 ntBASIC2.99□□□□□ -1.93
PRPF38AQ8NAV1 AL163540.1-201ENST00000485382 386 ntBASIC2.99□□□□□ -1.93
PRPF38AQ8NAV1 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.99□□□□□ -1.93
PRPF38AQ8NAV1 RNU4-77P-201ENST00000516692 156 ntBASIC2.99□□□□□ -1.93
PRPF38AQ8NAV1 AP002770.2-201ENST00000543613 532 ntBASIC2.99□□□□□ -1.93
PRPF38AQ8NAV1 AL442163.3-201ENST00000554110 156 ntBASIC2.99□□□□□ -1.93
PRPF38AQ8NAV1 AC233702.2-202ENST00000562547 291 ntBASIC2.99□□□□□ -1.93
PRPF38AQ8NAV1 AC010297.1-201ENST00000623948 149 ntBASIC2.99□□□□□ -1.93
PRPF38AQ8NAV1 CTSLP2-204ENST00000629029 392 ntBASIC2.99□□□□□ -1.93
PRPF38AQ8NAV1 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
PRPF38AQ8NAV1 SNORA63-201ENST00000363450 132 ntBASIC2.98□□□□□ -1.93
PRPF38AQ8NAV1 SNORA3A-201ENST00000364113 130 ntBASIC2.98□□□□□ -1.93
PRPF38AQ8NAV1 Y_RNA.595-201ENST00000410403 105 ntBASIC2.98□□□□□ -1.93
PRPF38AQ8NAV1 EDDM3CP-201ENST00000415977 425 ntBASIC2.98□□□□□ -1.93
PRPF38AQ8NAV1 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.98□□□□□ -1.93
PRPF38AQ8NAV1 AL160004.2-201ENST00000432935 350 ntBASIC2.98□□□□□ -1.93
PRPF38AQ8NAV1 HMGN2P18-201ENST00000450680 270 ntBASIC2.98□□□□□ -1.93
PRPF38AQ8NAV1 AC007395.1-201ENST00000451333 677 ntBASIC2.98□□□□□ -1.93
PRPF38AQ8NAV1 AL137159.1-201ENST00000452808 512 ntBASIC2.98□□□□□ -1.93
PRPF38AQ8NAV1 AL139109.1-201ENST00000455491 297 ntBASIC2.98□□□□□ -1.93
PRPF38AQ8NAV1 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.98□□□□□ -1.93
PRPF38AQ8NAV1 PRELID3BP1-201ENST00000457142 540 ntBASIC2.98□□□□□ -1.93
PRPF38AQ8NAV1 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.98□□□□□ -1.93
PRPF38AQ8NAV1 RNU6-991P-201ENST00000516168 107 ntBASIC2.98□□□□□ -1.93
PRPF38AQ8NAV1 RN7SKP49-201ENST00000516675 260 ntBASIC2.98□□□□□ -1.93
PRPF38AQ8NAV1 AC091544.4-201ENST00000555268 342 ntBASIC2.98□□□□□ -1.93
PRPF38AQ8NAV1 AC020661.2-201ENST00000560114 134 ntBASIC2.98□□□□□ -1.93
PRPF38AQ8NAV1 U4.3-201ENST00000621047 82 ntBASIC2.98□□□□□ -1.93
PRPF38AQ8NAV1 AC138305.3-201ENST00000624988 240 ntBASIC2.98□□□□□ -1.93
PRPF38AQ8NAV1 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.98□□□□□ -1.93
PRPF38AQ8NAV1 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.98□□□□□ -1.93
PRPF38AQ8NAV1 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.97□□□□□ -1.93
PRPF38AQ8NAV1 Y_RNA.80-201ENST00000362996 102 ntBASIC2.97□□□□□ -1.93
PRPF38AQ8NAV1 RNY3P4-201ENST00000384428 101 ntBASIC2.97□□□□□ -1.93
PRPF38AQ8NAV1 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.97□□□□□ -1.93
PRPF38AQ8NAV1 AL445305.1-201ENST00000432577 575 ntBASIC2.97□□□□□ -1.93
PRPF38AQ8NAV1 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.97□□□□□ -1.93
PRPF38AQ8NAV1 ATP5EP1-201ENST00000510257 156 ntBASIC2.97□□□□□ -1.93
PRPF38AQ8NAV1 RNA5SP320-201ENST00000516263 124 ntBASIC2.97□□□□□ -1.93
PRPF38AQ8NAV1 RNU1-104P-201ENST00000517280 175 ntBASIC2.97□□□□□ -1.93
PRPF38AQ8NAV1 PRELID2P1-201ENST00000552837 301 ntBASIC2.97□□□□□ -1.93
PRPF38AQ8NAV1 HSBP1P1-201ENST00000555205 166 ntBASIC2.97□□□□□ -1.93
PRPF38AQ8NAV1 MIR4753-201ENST00000585119 83 ntBASIC2.97□□□□□ -1.93
PRPF38AQ8NAV1 AL590808.1-201ENST00000618696 141 ntBASIC2.97□□□□□ -1.93
PRPF38AQ8NAV1 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
PRPF38AQ8NAV1 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.96□□□□□ -1.94
PRPF38AQ8NAV1 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
PRPF38AQ8NAV1 Y_RNA.27-201ENST00000362540 103 ntBASIC2.96□□□□□ -1.94
PRPF38AQ8NAV1 Y_RNA.31-201ENST00000362574 102 ntBASIC2.96□□□□□ -1.94
PRPF38AQ8NAV1 RNY3P11-201ENST00000364153 102 ntBASIC2.96□□□□□ -1.94
PRPF38AQ8NAV1 RNU6-308P-201ENST00000390957 107 ntBASIC2.96□□□□□ -1.94
PRPF38AQ8NAV1 AC093852.1-201ENST00000503587 266 ntBASIC2.96□□□□□ -1.94
PRPF38AQ8NAV1 RNU6-1153P-201ENST00000516760 105 ntBASIC2.96□□□□□ -1.94
PRPF38AQ8NAV1 SNORA31.15-201ENST00000516771 132 ntBASIC2.96□□□□□ -1.94
PRPF38AQ8NAV1 RRN3P3-201ENST00000549207 578 ntBASIC2.96□□□□□ -1.94
PRPF38AQ8NAV1 AC125232.2-201ENST00000592457 143 ntBASIC2.96□□□□□ -1.94
PRPF38AQ8NAV1 RPS29P30-201ENST00000600975 111 ntBASIC2.96□□□□□ -1.94
PRPF38AQ8NAV1 AC116312.1-201ENST00000606841 314 ntBASIC2.96□□□□□ -1.94
PRPF38AQ8NAV1 AC007485.1-201ENST00000616755 206 ntBASIC2.96□□□□□ -1.94
PRPF38AQ8NAV1 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.96□□□□□ -1.94
PRPF38AQ8NAV1 AC068205.3-201ENST00000636385 468 ntBASIC2.96□□□□□ -1.94
PRPF38AQ8NAV1 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
PRPF38AQ8NAV1 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
PRPF38AQ8NAV1 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.96□□□□□ -1.94
PRPF38AQ8NAV1 AC005592.1-201ENST00000566527 1640 ntBASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 167.7 ms