Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
DEPDC4Q8N2C3 AC091152.2-201ENST00000591628 2569 ntBASIC3.86□□□□□ -1.79
DEPDC4Q8N2C3 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
DEPDC4Q8N2C3 RNU6-834P-201ENST00000362367 110 ntBASIC3.86□□□□□ -1.79
DEPDC4Q8N2C3 RNU4-13P-201ENST00000364019 141 ntBASIC3.86□□□□□ -1.79
DEPDC4Q8N2C3 RNU4-41P-201ENST00000364426 143 ntBASIC3.86□□□□□ -1.79
DEPDC4Q8N2C3 RNU6-546P-201ENST00000383991 107 ntBASIC3.86□□□□□ -1.79
DEPDC4Q8N2C3 RNU6-418P-201ENST00000384035 107 ntBASIC3.86□□□□□ -1.79
DEPDC4Q8N2C3 SNORA37-201ENST00000384504 129 ntBASIC3.86□□□□□ -1.79
DEPDC4Q8N2C3 MIR659-201ENST00000384963 97 ntBASIC3.86□□□□□ -1.79
DEPDC4Q8N2C3 RNU6-1328P-201ENST00000410938 106 ntBASIC3.86□□□□□ -1.79
DEPDC4Q8N2C3 AC016909.1-201ENST00000415916 166 ntBASIC3.86□□□□□ -1.79
DEPDC4Q8N2C3 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC3.86□□□□□ -1.79
DEPDC4Q8N2C3 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.86□□□□□ -1.79
DEPDC4Q8N2C3 RN7SL98P-201ENST00000462271 300 ntBASIC3.86□□□□□ -1.79
DEPDC4Q8N2C3 RNU6-197P-201ENST00000516680 100 ntBASIC3.86□□□□□ -1.79
DEPDC4Q8N2C3 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.86□□□□□ -1.79
DEPDC4Q8N2C3 AP001328.1-201ENST00000528550 176 ntBASIC3.86□□□□□ -1.79
DEPDC4Q8N2C3 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
DEPDC4Q8N2C3 MIR2681-201ENST00000581814 105 ntBASIC3.86□□□□□ -1.79
DEPDC4Q8N2C3 MIR3939-201ENST00000582614 106 ntBASIC3.86□□□□□ -1.79
DEPDC4Q8N2C3 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.86□□□□□ -1.79
DEPDC4Q8N2C3 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.86□□□□□ -1.79
DEPDC4Q8N2C3 U7.2-201ENST00000607576 63 ntBASIC3.86□□□□□ -1.79
DEPDC4Q8N2C3 MIR486-1-201ENST00000612171 68 ntBASIC3.86□□□□□ -1.79
DEPDC4Q8N2C3 uc_338.13-201ENST00000618243 179 ntBASIC3.86□□□□□ -1.79
DEPDC4Q8N2C3 AC091953.5-201ENST00000622919 233 ntBASIC3.86□□□□□ -1.79
DEPDC4Q8N2C3 AC034229.5-201ENST00000624258 185 ntBASIC3.86□□□□□ -1.79
DEPDC4Q8N2C3 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.86□□□□□ -1.79
DEPDC4Q8N2C3 AL773545.4-201ENST00000637262 310 ntBASIC3.86□□□□□ -1.79
DEPDC4Q8N2C3 AL513478.4-201ENST00000641636 310 ntBASIC3.86□□□□□ -1.79
DEPDC4Q8N2C3 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
DEPDC4Q8N2C3 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
DEPDC4Q8N2C3 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.86□□□□□ -1.79
DEPDC4Q8N2C3 AC080128.1-201ENST00000474389 1917 ntBASIC3.85□□□□□ -1.79
DEPDC4Q8N2C3 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
DEPDC4Q8N2C3 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
DEPDC4Q8N2C3 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
DEPDC4Q8N2C3 Z82217.1-201ENST00000625157 8149 ntBASIC3.85□□□□□ -1.79
DEPDC4Q8N2C3 Y_RNA.251-201ENST00000364551 99 ntBASIC3.85□□□□□ -1.79
DEPDC4Q8N2C3 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
DEPDC4Q8N2C3 MIR134-201ENST00000385258 73 ntBASIC3.85□□□□□ -1.79
DEPDC4Q8N2C3 AL138878.1-201ENST00000405131 347 ntBASIC3.85□□□□□ -1.79
DEPDC4Q8N2C3 RNA5SP511-201ENST00000410487 115 ntBASIC3.85□□□□□ -1.79
DEPDC4Q8N2C3 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC3.85□□□□□ -1.79
DEPDC4Q8N2C3 CYP2C59P-201ENST00000457790 269 ntBASIC3.85□□□□□ -1.79
DEPDC4Q8N2C3 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC3.85□□□□□ -1.79
DEPDC4Q8N2C3 RAC1P5-201ENST00000512182 576 ntBASIC3.85□□□□□ -1.79
DEPDC4Q8N2C3 RNU4-57P-201ENST00000515980 135 ntBASIC3.85□□□□□ -1.79
DEPDC4Q8N2C3 AC107934.2-201ENST00000518653 310 ntBASIC3.85□□□□□ -1.79
DEPDC4Q8N2C3 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC3.85□□□□□ -1.79
DEPDC4Q8N2C3 AC023043.3-201ENST00000593113 385 ntBASIC3.85□□□□□ -1.79
DEPDC4Q8N2C3 AC013412.1-201ENST00000610687 192 ntBASIC3.85□□□□□ -1.79
DEPDC4Q8N2C3 MIR1248-201ENST00000629190 106 ntBASIC3.85□□□□□ -1.79
DEPDC4Q8N2C3 MIR7515-201ENST00000637837 67 ntBASIC3.85□□□□□ -1.79
DEPDC4Q8N2C3 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.85□□□□□ -1.79
DEPDC4Q8N2C3 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
DEPDC4Q8N2C3 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
DEPDC4Q8N2C3 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.85□□□□□ -1.79
DEPDC4Q8N2C3 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
DEPDC4Q8N2C3 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
DEPDC4Q8N2C3 RNU1-132P-201ENST00000364300 164 ntBASIC3.84□□□□□ -1.79
DEPDC4Q8N2C3 SNORA68.1-201ENST00000364537 132 ntBASIC3.84□□□□□ -1.79
DEPDC4Q8N2C3 RNU6-1180P-201ENST00000364935 107 ntBASIC3.84□□□□□ -1.79
DEPDC4Q8N2C3 RNU6-215P-201ENST00000365169 102 ntBASIC3.84□□□□□ -1.79
DEPDC4Q8N2C3 MIR181A2-201ENST00000384863 110 ntBASIC3.84□□□□□ -1.79
DEPDC4Q8N2C3 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
DEPDC4Q8N2C3 Y_RNA.622-201ENST00000411091 108 ntBASIC3.84□□□□□ -1.79
DEPDC4Q8N2C3 AC245047.4-201ENST00000433189 144 ntBASIC3.84□□□□□ -1.79
DEPDC4Q8N2C3 RPS27P22-201ENST00000478056 241 ntBASIC3.84□□□□□ -1.79
DEPDC4Q8N2C3 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.84□□□□□ -1.79
DEPDC4Q8N2C3 SNORA31.9-201ENST00000516429 84 ntBASIC3.84□□□□□ -1.79
DEPDC4Q8N2C3 RNU6-63P-201ENST00000516690 95 ntBASIC3.84□□□□□ -1.79
DEPDC4Q8N2C3 RNA5SP490-201ENST00000517141 136 ntBASIC3.84□□□□□ -1.79
DEPDC4Q8N2C3 AC027419.1-201ENST00000522976 328 ntBASIC3.84□□□□□ -1.79
DEPDC4Q8N2C3 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.84□□□□□ -1.79
DEPDC4Q8N2C3 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.84□□□□□ -1.79
DEPDC4Q8N2C3 AC113403.1-201ENST00000604910 193 ntBASIC3.84□□□□□ -1.79
DEPDC4Q8N2C3 AC011603.4-201ENST00000611325 277 ntBASIC3.84□□□□□ -1.79
DEPDC4Q8N2C3 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.84□□□□□ -1.79
DEPDC4Q8N2C3 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.84□□□□□ -1.79
DEPDC4Q8N2C3 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
DEPDC4Q8N2C3 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
DEPDC4Q8N2C3 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
DEPDC4Q8N2C3 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
DEPDC4Q8N2C3 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
DEPDC4Q8N2C3 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
DEPDC4Q8N2C3 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
DEPDC4Q8N2C3 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
DEPDC4Q8N2C3 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.83□□□□□ -1.8
DEPDC4Q8N2C3 MIR423-201ENST00000362201 94 ntBASIC3.83□□□□□ -1.8
DEPDC4Q8N2C3 RNU1-22P-201ENST00000363334 158 ntBASIC3.83□□□□□ -1.8
DEPDC4Q8N2C3 Y_RNA.587-201ENST00000391210 103 ntBASIC3.83□□□□□ -1.8
DEPDC4Q8N2C3 SNORA11F-201ENST00000408237 128 ntBASIC3.83□□□□□ -1.8
DEPDC4Q8N2C3 RNU6-588P-201ENST00000410281 105 ntBASIC3.83□□□□□ -1.8
DEPDC4Q8N2C3 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.83□□□□□ -1.8
DEPDC4Q8N2C3 DBIP2-201ENST00000419076 262 ntBASIC3.83□□□□□ -1.8
DEPDC4Q8N2C3 AC063976.3-201ENST00000426849 329 ntBASIC3.83□□□□□ -1.8
DEPDC4Q8N2C3 MTCO1P44-201ENST00000441935 243 ntBASIC3.83□□□□□ -1.8
DEPDC4Q8N2C3 RPL31P61-201ENST00000496160 376 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms