Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 SNORD12B-201ENST00000410433 91 ntBASIC2.24□□□□□ -2.05
SHFQ7M4L6 ARL5AP4-201ENST00000430731 512 ntBASIC2.24□□□□□ -2.05
SHFQ7M4L6 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.24□□□□□ -2.05
SHFQ7M4L6 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.24□□□□□ -2.05
SHFQ7M4L6 U8.20-201ENST00000459445 131 ntBASIC2.24□□□□□ -2.05
SHFQ7M4L6 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.24□□□□□ -2.05
SHFQ7M4L6 ATP5EP1-201ENST00000510257 156 ntBASIC2.24□□□□□ -2.05
SHFQ7M4L6 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.24□□□□□ -2.05
SHFQ7M4L6 Y_RNA.683-201ENST00000516508 93 ntBASIC2.24□□□□□ -2.05
SHFQ7M4L6 RPPH1-2P-201ENST00000516688 293 ntBASIC2.24□□□□□ -2.05
SHFQ7M4L6 Y_RNA.720-201ENST00000517166 92 ntBASIC2.24□□□□□ -2.05
SHFQ7M4L6 IGLV3-17-201ENST00000519099 244 ntBASIC2.24□□□□□ -2.05
SHFQ7M4L6 AC008737.2-201ENST00000599446 118 ntBASIC2.24□□□□□ -2.05
SHFQ7M4L6 RPS29P30-201ENST00000600975 111 ntBASIC2.24□□□□□ -2.05
SHFQ7M4L6 RPL17P51-201ENST00000605218 238 ntBASIC2.24□□□□□ -2.05
SHFQ7M4L6 AL078596.1-201ENST00000624856 447 ntBASIC2.24□□□□□ -2.05
SHFQ7M4L6 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.24□□□□□ -2.05
SHFQ7M4L6 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.24□□□□□ -2.05
SHFQ7M4L6 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.24□□□□□ -2.05
SHFQ7M4L6 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
SHFQ7M4L6 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
SHFQ7M4L6 MTND5P35-201ENST00000557537 1720 ntBASIC2.23□□□□□ -2.05
SHFQ7M4L6 RNU6-727P-201ENST00000363592 107 ntBASIC2.23□□□□□ -2.05
SHFQ7M4L6 RNU5F-3P-201ENST00000363767 117 ntBASIC2.23□□□□□ -2.05
SHFQ7M4L6 RNA5SP456-201ENST00000364002 114 ntBASIC2.23□□□□□ -2.05
SHFQ7M4L6 RNU4-50P-201ENST00000364361 141 ntBASIC2.23□□□□□ -2.05
SHFQ7M4L6 SNORA9-201ENST00000384215 133 ntBASIC2.23□□□□□ -2.05
SHFQ7M4L6 Y_RNA.458-201ENST00000384240 102 ntBASIC2.23□□□□□ -2.05
SHFQ7M4L6 Y_RNA.526-201ENST00000384572 110 ntBASIC2.23□□□□□ -2.05
SHFQ7M4L6 RNU6-1072P-201ENST00000384703 107 ntBASIC2.23□□□□□ -2.05
SHFQ7M4L6 RNU6-443P-201ENST00000384780 107 ntBASIC2.23□□□□□ -2.05
SHFQ7M4L6 MIR1252-201ENST00000408861 65 ntBASIC2.23□□□□□ -2.05
SHFQ7M4L6 RNA5SP504-201ENST00000410676 117 ntBASIC2.23□□□□□ -2.05
SHFQ7M4L6 RNU2-25P-201ENST00000411041 191 ntBASIC2.23□□□□□ -2.05
SHFQ7M4L6 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.23□□□□□ -2.05
SHFQ7M4L6 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.23□□□□□ -2.05
SHFQ7M4L6 SDAD1P3-201ENST00000427380 333 ntBASIC2.23□□□□□ -2.05
SHFQ7M4L6 IFNA11P-201ENST00000446352 526 ntBASIC2.23□□□□□ -2.05
SHFQ7M4L6 AC007395.1-201ENST00000451333 677 ntBASIC2.23□□□□□ -2.05
SHFQ7M4L6 RPS23P5-201ENST00000495419 428 ntBASIC2.23□□□□□ -2.05
SHFQ7M4L6 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.23□□□□□ -2.05
SHFQ7M4L6 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.23□□□□□ -2.05
SHFQ7M4L6 RNU6-1045P-201ENST00000516321 107 ntBASIC2.23□□□□□ -2.05
SHFQ7M4L6 RNU6-1046P-201ENST00000516538 107 ntBASIC2.23□□□□□ -2.05
SHFQ7M4L6 RNU5F-4P-201ENST00000516581 114 ntBASIC2.23□□□□□ -2.05
SHFQ7M4L6 RNU6-344P-201ENST00000516635 111 ntBASIC2.23□□□□□ -2.05
SHFQ7M4L6 AC034114.1-201ENST00000520293 285 ntBASIC2.23□□□□□ -2.05
SHFQ7M4L6 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.23□□□□□ -2.05
SHFQ7M4L6 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.23□□□□□ -2.05
SHFQ7M4L6 AL390123.1-201ENST00000603216 237 ntBASIC2.23□□□□□ -2.05
SHFQ7M4L6 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.23□□□□□ -2.05
SHFQ7M4L6 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.23□□□□□ -2.05
SHFQ7M4L6 U4.3-201ENST00000621047 82 ntBASIC2.23□□□□□ -2.05
SHFQ7M4L6 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
SHFQ7M4L6 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.23□□□□□ -2.05
SHFQ7M4L6 AC007336.1-201ENST00000576365 3828 ntBASIC2.23□□□□□ -2.05
SHFQ7M4L6 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
SHFQ7M4L6 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.23□□□□□ -2.05
SHFQ7M4L6 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
SHFQ7M4L6 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
SHFQ7M4L6 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.22□□□□□ -2.05
SHFQ7M4L6 RNU6-926P-201ENST00000384075 107 ntBASIC2.22□□□□□ -2.05
SHFQ7M4L6 SNORA67.2-201ENST00000384300 149 ntBASIC2.22□□□□□ -2.05
SHFQ7M4L6 Y_RNA.471-201ENST00000384312 102 ntBASIC2.22□□□□□ -2.05
SHFQ7M4L6 MIR561-201ENST00000385216 97 ntBASIC2.22□□□□□ -2.05
SHFQ7M4L6 SNORD78.2-201ENST00000391076 69 ntBASIC2.22□□□□□ -2.05
SHFQ7M4L6 AL033519.2-201ENST00000403958 392 ntBASIC2.22□□□□□ -2.05
SHFQ7M4L6 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.22□□□□□ -2.05
SHFQ7M4L6 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.22□□□□□ -2.05
SHFQ7M4L6 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.22□□□□□ -2.05
SHFQ7M4L6 RPEP5-201ENST00000441137 268 ntBASIC2.22□□□□□ -2.05
SHFQ7M4L6 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.22□□□□□ -2.05
SHFQ7M4L6 MTND5P22-201ENST00000458380 195 ntBASIC2.22□□□□□ -2.05
SHFQ7M4L6 RNU7-26P-201ENST00000458980 63 ntBASIC2.22□□□□□ -2.05
SHFQ7M4L6 AC109329.2-201ENST00000519658 482 ntBASIC2.22□□□□□ -2.05
SHFQ7M4L6 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.22□□□□□ -2.05
SHFQ7M4L6 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.22□□□□□ -2.05
SHFQ7M4L6 RRN3P3-201ENST00000549207 578 ntBASIC2.22□□□□□ -2.05
SHFQ7M4L6 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.22□□□□□ -2.05
SHFQ7M4L6 AC136443.5-201ENST00000603741 370 ntBASIC2.22□□□□□ -2.05
SHFQ7M4L6 AC005034.5-201ENST00000604219 466 ntBASIC2.22□□□□□ -2.05
SHFQ7M4L6 MIR6895-201ENST00000613497 78 ntBASIC2.22□□□□□ -2.05
SHFQ7M4L6 AC011476.5-201ENST00000615594 130 ntBASIC2.22□□□□□ -2.05
SHFQ7M4L6 AL449363.1-201ENST00000617815 186 ntBASIC2.22□□□□□ -2.05
SHFQ7M4L6 AL137790.1-201ENST00000634283 177 ntBASIC2.22□□□□□ -2.05
SHFQ7M4L6 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.22□□□□□ -2.05
SHFQ7M4L6 MIR21-201ENST00000362134 72 ntBASIC2.21□□□□□ -2.06
SHFQ7M4L6 RNU6-743P-201ENST00000364151 106 ntBASIC2.21□□□□□ -2.06
SHFQ7M4L6 SNORA25B-201ENST00000365507 128 ntBASIC2.21□□□□□ -2.06
SHFQ7M4L6 Y_RNA.380-201ENST00000365663 111 ntBASIC2.21□□□□□ -2.06
SHFQ7M4L6 Y_RNA.415-201ENST00000384012 112 ntBASIC2.21□□□□□ -2.06
SHFQ7M4L6 Y_RNA.551-201ENST00000384661 102 ntBASIC2.21□□□□□ -2.06
SHFQ7M4L6 Y_RNA.595-201ENST00000410403 105 ntBASIC2.21□□□□□ -2.06
SHFQ7M4L6 RNU6-130P-201ENST00000411112 103 ntBASIC2.21□□□□□ -2.06
SHFQ7M4L6 FCF1P4-201ENST00000448326 183 ntBASIC2.21□□□□□ -2.06
SHFQ7M4L6 RNU7-14P-201ENST00000459331 62 ntBASIC2.21□□□□□ -2.06
SHFQ7M4L6 AC010655.3-201ENST00000478818 450 ntBASIC2.21□□□□□ -2.06
SHFQ7M4L6 RPL26P26-201ENST00000480251 434 ntBASIC2.21□□□□□ -2.06
SHFQ7M4L6 AC067942.3-201ENST00000512025 362 ntBASIC2.21□□□□□ -2.06
SHFQ7M4L6 SNORA40.9-201ENST00000515895 93 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms