Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 RNU6-917P-201ENST00000516294 104 ntBASIC0.42□□□□□ -2.34
HIST2H3AQ71DI3 Vault.3-201ENST00000516676 95 ntBASIC0.42□□□□□ -2.34
HIST2H3AQ71DI3 AC016256.1-201ENST00000547971 354 ntBASIC0.42□□□□□ -2.34
HIST2H3AQ71DI3 AC090049.2-201ENST00000550377 109 ntBASIC0.42□□□□□ -2.34
HIST2H3AQ71DI3 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.42□□□□□ -2.34
HIST2H3AQ71DI3 AL359075.3-201ENST00000613288 217 ntBASIC0.42□□□□□ -2.34
HIST2H3AQ71DI3 AC073349.3-201ENST00000617616 186 ntBASIC0.42□□□□□ -2.34
HIST2H3AQ71DI3 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.42□□□□□ -2.34
HIST2H3AQ71DI3 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.41□□□□□ -2.34
HIST2H3AQ71DI3 RNU6-434P-201ENST00000384376 107 ntBASIC0.41□□□□□ -2.34
HIST2H3AQ71DI3 MIR499A-201ENST00000384903 122 ntBASIC0.41□□□□□ -2.34
HIST2H3AQ71DI3 RNU6-440P-201ENST00000390882 105 ntBASIC0.41□□□□□ -2.34
HIST2H3AQ71DI3 SNORD70.1-201ENST00000391007 85 ntBASIC0.41□□□□□ -2.34
HIST2H3AQ71DI3 AL355796.1-201ENST00000406706 323 ntBASIC0.41□□□□□ -2.34
HIST2H3AQ71DI3 MIR1253-201ENST00000408273 105 ntBASIC0.41□□□□□ -2.34
HIST2H3AQ71DI3 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC0.41□□□□□ -2.34
HIST2H3AQ71DI3 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC0.41□□□□□ -2.34
HIST2H3AQ71DI3 AC079781.2-201ENST00000446424 169 ntBASIC0.41□□□□□ -2.34
HIST2H3AQ71DI3 MTCO3P8-201ENST00000453691 755 ntBASIC0.41□□□□□ -2.34
HIST2H3AQ71DI3 RNU6-947P-201ENST00000516264 106 ntBASIC0.41□□□□□ -2.34
HIST2H3AQ71DI3 RNU1-142P-201ENST00000516682 145 ntBASIC0.41□□□□□ -2.34
HIST2H3AQ71DI3 AC025647.1-201ENST00000517879 253 ntBASIC0.41□□□□□ -2.34
HIST2H3AQ71DI3 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.41□□□□□ -2.34
HIST2H3AQ71DI3 MIR4778-201ENST00000577635 80 ntBASIC0.41□□□□□ -2.34
HIST2H3AQ71DI3 MIR5000-201ENST00000577717 103 ntBASIC0.41□□□□□ -2.34
HIST2H3AQ71DI3 MIR151B-201ENST00000584249 96 ntBASIC0.41□□□□□ -2.34
HIST2H3AQ71DI3 RSL24D1P11-201ENST00000591045 491 ntBASIC0.41□□□□□ -2.34
HIST2H3AQ71DI3 AL133173.2-201ENST00000614270 90 ntBASIC0.41□□□□□ -2.34
HIST2H3AQ71DI3 AC008873.1-201ENST00000625051 138 ntBASIC0.41□□□□□ -2.34
HIST2H3AQ71DI3 MTND4P5-201ENST00000435821 1374 ntBASIC0.41□□□□□ -2.34
HIST2H3AQ71DI3 ELL2P3-201ENST00000457883 1602 ntBASIC0.4□□□□□ -2.35
HIST2H3AQ71DI3 RNU5B-2P-201ENST00000363036 113 ntBASIC0.4□□□□□ -2.35
HIST2H3AQ71DI3 SNORA67.2-201ENST00000384300 149 ntBASIC0.4□□□□□ -2.35
HIST2H3AQ71DI3 MRPL42P3-201ENST00000401492 326 ntBASIC0.4□□□□□ -2.35
HIST2H3AQ71DI3 AL034345.1-201ENST00000407768 123 ntBASIC0.4□□□□□ -2.35
HIST2H3AQ71DI3 AC098592.1-201ENST00000419352 333 ntBASIC0.4□□□□□ -2.35
HIST2H3AQ71DI3 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC0.4□□□□□ -2.35
HIST2H3AQ71DI3 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC0.4□□□□□ -2.35
HIST2H3AQ71DI3 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC0.4□□□□□ -2.35
HIST2H3AQ71DI3 RPS29P15-201ENST00000458329 171 ntBASIC0.4□□□□□ -2.35
HIST2H3AQ71DI3 RNU7-57P-201ENST00000459540 60 ntBASIC0.4□□□□□ -2.35
HIST2H3AQ71DI3 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC0.4□□□□□ -2.35
HIST2H3AQ71DI3 UBE2V1P12-201ENST00000503954 474 ntBASIC0.4□□□□□ -2.35
HIST2H3AQ71DI3 RNU6-323P-201ENST00000521915 107 ntBASIC0.4□□□□□ -2.35
HIST2H3AQ71DI3 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.4□□□□□ -2.35
HIST2H3AQ71DI3 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC0.4□□□□□ -2.35
HIST2H3AQ71DI3 AL137100.2-201ENST00000555786 315 ntBASIC0.4□□□□□ -2.35
HIST2H3AQ71DI3 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.4□□□□□ -2.35
HIST2H3AQ71DI3 RNA5SP347-201ENST00000362445 119 ntBASIC0.39□□□□□ -2.35
HIST2H3AQ71DI3 RNU6-199P-201ENST00000362954 107 ntBASIC0.39□□□□□ -2.35
HIST2H3AQ71DI3 RNU6-1305P-201ENST00000364353 104 ntBASIC0.39□□□□□ -2.35
HIST2H3AQ71DI3 RNU4-48P-201ENST00000365559 182 ntBASIC0.39□□□□□ -2.35
HIST2H3AQ71DI3 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.39□□□□□ -2.35
HIST2H3AQ71DI3 RNU6-945P-201ENST00000383947 107 ntBASIC0.39□□□□□ -2.35
HIST2H3AQ71DI3 SNORD116-13-201ENST00000384408 92 ntBASIC0.39□□□□□ -2.35
HIST2H3AQ71DI3 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.39□□□□□ -2.35
HIST2H3AQ71DI3 CDK8P2-201ENST00000415020 547 ntBASIC0.39□□□□□ -2.35
HIST2H3AQ71DI3 MTCO2P34-201ENST00000421994 607 ntBASIC0.39□□□□□ -2.35
HIST2H3AQ71DI3 GPR143P-201ENST00000434155 205 ntBASIC0.39□□□□□ -2.35
HIST2H3AQ71DI3 RPEP5-201ENST00000441137 268 ntBASIC0.39□□□□□ -2.35
HIST2H3AQ71DI3 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC0.39□□□□□ -2.35
HIST2H3AQ71DI3 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.39□□□□□ -2.35
HIST2H3AQ71DI3 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC0.39□□□□□ -2.35
HIST2H3AQ71DI3 RNU7-182P-201ENST00000459009 62 ntBASIC0.39□□□□□ -2.35
HIST2H3AQ71DI3 RNU7-90P-201ENST00000459216 62 ntBASIC0.39□□□□□ -2.35
HIST2H3AQ71DI3 AL049830.1-201ENST00000468034 425 ntBASIC0.39□□□□□ -2.35
HIST2H3AQ71DI3 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC0.39□□□□□ -2.35
HIST2H3AQ71DI3 AC025465.4-201ENST00000513422 638 ntBASIC0.39□□□□□ -2.35
HIST2H3AQ71DI3 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC0.39□□□□□ -2.35
HIST2H3AQ71DI3 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC0.39□□□□□ -2.35
HIST2H3AQ71DI3 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC0.39□□□□□ -2.35
HIST2H3AQ71DI3 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.39□□□□□ -2.35
HIST2H3AQ71DI3 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC0.39□□□□□ -2.35
HIST2H3AQ71DI3 AC004584.2-201ENST00000570407 410 ntBASIC0.39□□□□□ -2.35
HIST2H3AQ71DI3 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC0.39□□□□□ -2.35
HIST2H3AQ71DI3 MIR4703-201ENST00000577728 79 ntBASIC0.39□□□□□ -2.35
HIST2H3AQ71DI3 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC0.39□□□□□ -2.35
HIST2H3AQ71DI3 AC068790.2-201ENST00000602601 557 ntBASIC0.39□□□□□ -2.35
HIST2H3AQ71DI3 PRELID3BP2-201ENST00000605362 201 ntBASIC0.39□□□□□ -2.35
HIST2H3AQ71DI3 MIR7844-201ENST00000616161 122 ntBASIC0.39□□□□□ -2.35
HIST2H3AQ71DI3 AC139792.3-201ENST00000623525 224 ntBASIC0.39□□□□□ -2.35
HIST2H3AQ71DI3 SEPT14P19-203ENST00000633205 211 ntBASIC0.39□□□□□ -2.35
HIST2H3AQ71DI3 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.38□□□□□ -2.35
HIST2H3AQ71DI3 CASC19-280ENST00000642102 1351 ntBASIC0.38□□□□□ -2.35
HIST2H3AQ71DI3 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.38□□□□□ -2.35
HIST2H3AQ71DI3 MIR513B-201ENST00000385136 84 ntBASIC0.38□□□□□ -2.35
HIST2H3AQ71DI3 AC114737.2-201ENST00000421583 173 ntBASIC0.38□□□□□ -2.35
HIST2H3AQ71DI3 RNU6-221P-201ENST00000459541 99 ntBASIC0.38□□□□□ -2.35
HIST2H3AQ71DI3 RPS29P27-201ENST00000463711 170 ntBASIC0.38□□□□□ -2.35
HIST2H3AQ71DI3 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.38□□□□□ -2.35
HIST2H3AQ71DI3 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.38□□□□□ -2.35
HIST2H3AQ71DI3 AC113410.1-201ENST00000505029 247 ntBASIC0.38□□□□□ -2.35
HIST2H3AQ71DI3 RPL39P5-202ENST00000512505 151 ntBASIC0.38□□□□□ -2.35
HIST2H3AQ71DI3 SNORA70.12-201ENST00000516084 153 ntBASIC0.38□□□□□ -2.35
HIST2H3AQ71DI3 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC0.38□□□□□ -2.35
HIST2H3AQ71DI3 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.38□□□□□ -2.35
HIST2H3AQ71DI3 snoZ196.1-201ENST00000625269 89 ntBASIC0.38□□□□□ -2.35
HIST2H3AQ71DI3 AP000568.1-201ENST00000282964 442 ntBASIC0.37□□□□□ -2.35
HIST2H3AQ71DI3 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC0.37□□□□□ -2.35
HIST2H3AQ71DI3 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC0.37□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 169.6 ms