Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 AC006111.3-201ENST00000622137 383 ntBASIC3.33□□□□□ -1.88
RNF111Q6ZNA4 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RNF111Q6ZNA4 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RNF111Q6ZNA4 AC010680.1-201ENST00000590024 3590 ntBASIC3.33□□□□□ -1.88
RNF111Q6ZNA4 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RNF111Q6ZNA4 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.33□□□□□ -1.88
RNF111Q6ZNA4 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
RNF111Q6ZNA4 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
RNF111Q6ZNA4 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.32□□□□□ -1.88
RNF111Q6ZNA4 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RNF111Q6ZNA4 RNU6-103P-201ENST00000363686 107 ntBASIC3.32□□□□□ -1.88
RNF111Q6ZNA4 RNU6-899P-201ENST00000363947 107 ntBASIC3.32□□□□□ -1.88
RNF111Q6ZNA4 Y_RNA.368-201ENST00000365547 113 ntBASIC3.32□□□□□ -1.88
RNF111Q6ZNA4 RNU6-257P-201ENST00000410238 98 ntBASIC3.32□□□□□ -1.88
RNF111Q6ZNA4 Z75741.1-201ENST00000446793 314 ntBASIC3.32□□□□□ -1.88
RNF111Q6ZNA4 AL031183.1-201ENST00000457667 207 ntBASIC3.32□□□□□ -1.88
RNF111Q6ZNA4 AC106707.2-201ENST00000484182 374 ntBASIC3.32□□□□□ -1.88
RNF111Q6ZNA4 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.32□□□□□ -1.88
RNF111Q6ZNA4 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.32□□□□□ -1.88
RNF111Q6ZNA4 RNU2-27P-201ENST00000516185 142 ntBASIC3.32□□□□□ -1.88
RNF111Q6ZNA4 RNU6-313P-201ENST00000516317 112 ntBASIC3.32□□□□□ -1.88
RNF111Q6ZNA4 RNU6-479P-201ENST00000516348 105 ntBASIC3.32□□□□□ -1.88
RNF111Q6ZNA4 AC079598.5-201ENST00000547460 117 ntBASIC3.32□□□□□ -1.88
RNF111Q6ZNA4 AC074050.1-201ENST00000563247 211 ntBASIC3.32□□□□□ -1.88
RNF111Q6ZNA4 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.32□□□□□ -1.88
RNF111Q6ZNA4 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.32□□□□□ -1.88
RNF111Q6ZNA4 MIR7851-201ENST00000610611 160 ntBASIC3.32□□□□□ -1.88
RNF111Q6ZNA4 AL365222.1-201ENST00000614661 98 ntBASIC3.32□□□□□ -1.88
RNF111Q6ZNA4 Y_RNA.802-201ENST00000614892 130 ntBASIC3.32□□□□□ -1.88
RNF111Q6ZNA4 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
RNF111Q6ZNA4 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.32□□□□□ -1.88
RNF111Q6ZNA4 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
RNF111Q6ZNA4 AC002546.1-201ENST00000588041 2504 ntBASIC3.31□□□□□ -1.88
RNF111Q6ZNA4 SNORD50B-201ENST00000364995 70 ntBASIC3.31□□□□□ -1.88
RNF111Q6ZNA4 Y_RNA.310-201ENST00000365063 113 ntBASIC3.31□□□□□ -1.88
RNF111Q6ZNA4 RPS29P4-201ENST00000414733 161 ntBASIC3.31□□□□□ -1.88
RNF111Q6ZNA4 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.31□□□□□ -1.88
RNF111Q6ZNA4 ARF4P2-201ENST00000430209 526 ntBASIC3.31□□□□□ -1.88
RNF111Q6ZNA4 Z98742.2-201ENST00000431564 187 ntBASIC3.31□□□□□ -1.88
RNF111Q6ZNA4 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.31□□□□□ -1.88
RNF111Q6ZNA4 CENPBD1P1-201ENST00000464061 469 ntBASIC3.31□□□□□ -1.88
RNF111Q6ZNA4 SCARNA8-201ENST00000515924 131 ntBASIC3.31□□□□□ -1.88
RNF111Q6ZNA4 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.31□□□□□ -1.88
RNF111Q6ZNA4 RNU6-1007P-201ENST00000516586 107 ntBASIC3.31□□□□□ -1.88
RNF111Q6ZNA4 SNORA70.18-201ENST00000516696 98 ntBASIC3.31□□□□□ -1.88
RNF111Q6ZNA4 RNU6-453P-201ENST00000516819 85 ntBASIC3.31□□□□□ -1.88
RNF111Q6ZNA4 RNA5SP380-201ENST00000517190 98 ntBASIC3.31□□□□□ -1.88
RNF111Q6ZNA4 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.31□□□□□ -1.88
RNF111Q6ZNA4 MIR4431-201ENST00000579990 94 ntBASIC3.31□□□□□ -1.88
RNF111Q6ZNA4 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.31□□□□□ -1.88
RNF111Q6ZNA4 AC008873.1-201ENST00000625051 138 ntBASIC3.31□□□□□ -1.88
RNF111Q6ZNA4 AC009093.8-201ENST00000641769 292 ntBASIC3.31□□□□□ -1.88
RNF111Q6ZNA4 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RNF111Q6ZNA4 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.31□□□□□ -1.88
RNF111Q6ZNA4 AL021368.2-201ENST00000606125 5352 ntBASIC3.3□□□□□ -1.88
RNF111Q6ZNA4 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.3□□□□□ -1.88
RNF111Q6ZNA4 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
RNF111Q6ZNA4 RNU4-11P-201ENST00000365287 132 ntBASIC3.3□□□□□ -1.88
RNF111Q6ZNA4 RNU6-969P-201ENST00000383900 105 ntBASIC3.3□□□□□ -1.88
RNF111Q6ZNA4 SNORA22C-201ENST00000384614 134 ntBASIC3.3□□□□□ -1.88
RNF111Q6ZNA4 MIR218-2-201ENST00000385006 110 ntBASIC3.3□□□□□ -1.88
RNF111Q6ZNA4 AL355497.1-201ENST00000406262 551 ntBASIC3.3□□□□□ -1.88
RNF111Q6ZNA4 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.3□□□□□ -1.88
RNF111Q6ZNA4 RNU6-735P-201ENST00000410612 107 ntBASIC3.3□□□□□ -1.88
RNF111Q6ZNA4 AL139281.1-201ENST00000422120 335 ntBASIC3.3□□□□□ -1.88
RNF111Q6ZNA4 CYCSP4-201ENST00000429682 331 ntBASIC3.3□□□□□ -1.88
RNF111Q6ZNA4 RBMY2UP-201ENST00000453474 324 ntBASIC3.3□□□□□ -1.88
RNF111Q6ZNA4 RN7SL594P-201ENST00000470590 287 ntBASIC3.3□□□□□ -1.88
RNF111Q6ZNA4 SRIP1-201ENST00000489235 288 ntBASIC3.3□□□□□ -1.88
RNF111Q6ZNA4 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC3.3□□□□□ -1.88
RNF111Q6ZNA4 SNORA25.12-201ENST00000516202 82 ntBASIC3.3□□□□□ -1.88
RNF111Q6ZNA4 RNU7-121P-201ENST00000516604 62 ntBASIC3.3□□□□□ -1.88
RNF111Q6ZNA4 AC093331.1-201ENST00000521474 169 ntBASIC3.3□□□□□ -1.88
RNF111Q6ZNA4 AC022616.8-201ENST00000533569 253 ntBASIC3.3□□□□□ -1.88
RNF111Q6ZNA4 MIR548X2-201ENST00000579776 100 ntBASIC3.3□□□□□ -1.88
RNF111Q6ZNA4 MIR4429-201ENST00000580105 73 ntBASIC3.3□□□□□ -1.88
RNF111Q6ZNA4 AL670379.2-201ENST00000604983 252 ntBASIC3.3□□□□□ -1.88
RNF111Q6ZNA4 SNORA51-201ENST00000606420 132 ntBASIC3.3□□□□□ -1.88
RNF111Q6ZNA4 AC099778.2-201ENST00000610904 211 ntBASIC3.3□□□□□ -1.88
RNF111Q6ZNA4 U4.6-201ENST00000621618 127 ntBASIC3.3□□□□□ -1.88
RNF111Q6ZNA4 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RNF111Q6ZNA4 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
RNF111Q6ZNA4 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RNF111Q6ZNA4 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
RNF111Q6ZNA4 PWAR6-201ENST00000552334 4618 ntBASIC3.29□□□□□ -1.88
RNF111Q6ZNA4 RNA5SP383-201ENST00000362934 120 ntBASIC3.29□□□□□ -1.88
RNF111Q6ZNA4 RNU6-1205P-201ENST00000363625 106 ntBASIC3.29□□□□□ -1.88
RNF111Q6ZNA4 RNU6-1027P-201ENST00000383998 107 ntBASIC3.29□□□□□ -1.88
RNF111Q6ZNA4 Y_RNA.456-201ENST00000384232 111 ntBASIC3.29□□□□□ -1.88
RNF111Q6ZNA4 MIR23B-201ENST00000384832 97 ntBASIC3.29□□□□□ -1.88
RNF111Q6ZNA4 AP000567.1-201ENST00000406413 156 ntBASIC3.29□□□□□ -1.88
RNF111Q6ZNA4 AC009969.1-201ENST00000438726 172 ntBASIC3.29□□□□□ -1.88
RNF111Q6ZNA4 AC245047.8-201ENST00000456455 284 ntBASIC3.29□□□□□ -1.88
RNF111Q6ZNA4 RNU7-141P-201ENST00000459304 62 ntBASIC3.29□□□□□ -1.88
RNF111Q6ZNA4 RPS29P2-201ENST00000479278 136 ntBASIC3.29□□□□□ -1.88
RNF111Q6ZNA4 AC010409.1-201ENST00000487382 476 ntBASIC3.29□□□□□ -1.88
RNF111Q6ZNA4 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.29□□□□□ -1.88
RNF111Q6ZNA4 AC107027.2-201ENST00000512197 115 ntBASIC3.29□□□□□ -1.88
RNF111Q6ZNA4 SNORA70.19-201ENST00000516717 90 ntBASIC3.29□□□□□ -1.88
RNF111Q6ZNA4 U3.45-201ENST00000607547 219 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms