Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 AC096638.1-201ENST00000444678 216 ntBASIC2.5□□□□□ -2.01
SYNE3Q6ZMZ3 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.5□□□□□ -2.01
SYNE3Q6ZMZ3 AP000870.1-201ENST00000472927 406 ntBASIC2.5□□□□□ -2.01
SYNE3Q6ZMZ3 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.5□□□□□ -2.01
SYNE3Q6ZMZ3 CKS1BP2-201ENST00000497342 240 ntBASIC2.5□□□□□ -2.01
SYNE3Q6ZMZ3 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.5□□□□□ -2.01
SYNE3Q6ZMZ3 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.5□□□□□ -2.01
SYNE3Q6ZMZ3 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.5□□□□□ -2.01
SYNE3Q6ZMZ3 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.5□□□□□ -2.01
SYNE3Q6ZMZ3 AC090617.3-201ENST00000573670 475 ntBASIC2.5□□□□□ -2.01
SYNE3Q6ZMZ3 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.5□□□□□ -2.01
SYNE3Q6ZMZ3 AC005562.2-201ENST00000618264 111 ntBASIC2.5□□□□□ -2.01
SYNE3Q6ZMZ3 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
SYNE3Q6ZMZ3 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
SYNE3Q6ZMZ3 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.5□□□□□ -2.01
SYNE3Q6ZMZ3 Y_RNA.106-201ENST00000363189 100 ntBASIC2.49□□□□□ -2.01
SYNE3Q6ZMZ3 MIR625-201ENST00000385047 85 ntBASIC2.49□□□□□ -2.01
SYNE3Q6ZMZ3 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.49□□□□□ -2.01
SYNE3Q6ZMZ3 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC2.49□□□□□ -2.01
SYNE3Q6ZMZ3 DPH3P2-201ENST00000422618 250 ntBASIC2.49□□□□□ -2.01
SYNE3Q6ZMZ3 EIF1P2-201ENST00000428233 350 ntBASIC2.49□□□□□ -2.01
SYNE3Q6ZMZ3 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
SYNE3Q6ZMZ3 RNU6-911P-201ENST00000516523 104 ntBASIC2.49□□□□□ -2.01
SYNE3Q6ZMZ3 Y_RNA.701-201ENST00000516812 110 ntBASIC2.49□□□□□ -2.01
SYNE3Q6ZMZ3 MIR2355-201ENST00000517199 87 ntBASIC2.49□□□□□ -2.01
SYNE3Q6ZMZ3 AC034114.1-201ENST00000520293 285 ntBASIC2.49□□□□□ -2.01
SYNE3Q6ZMZ3 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.49□□□□□ -2.01
SYNE3Q6ZMZ3 AC090517.1-201ENST00000569307 266 ntBASIC2.49□□□□□ -2.01
SYNE3Q6ZMZ3 AC044792.1-201ENST00000593294 196 ntBASIC2.49□□□□□ -2.01
SYNE3Q6ZMZ3 SNRPGP17-201ENST00000603780 214 ntBASIC2.49□□□□□ -2.01
SYNE3Q6ZMZ3 TCL6_2.1-201ENST00000615162 119 ntBASIC2.49□□□□□ -2.01
SYNE3Q6ZMZ3 AC012640.5-201ENST00000623897 319 ntBASIC2.49□□□□□ -2.01
SYNE3Q6ZMZ3 AC134503.1-201ENST00000633048 54 ntBASIC2.49□□□□□ -2.01
SYNE3Q6ZMZ3 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
SYNE3Q6ZMZ3 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
SYNE3Q6ZMZ3 RNU4-42P-201ENST00000364738 142 ntBASIC2.48□□□□□ -2.01
SYNE3Q6ZMZ3 RNU1-148P-201ENST00000384472 162 ntBASIC2.48□□□□□ -2.01
SYNE3Q6ZMZ3 AC004866.1-201ENST00000411748 78 ntBASIC2.48□□□□□ -2.01
SYNE3Q6ZMZ3 USP9YP16-201ENST00000430287 407 ntBASIC2.48□□□□□ -2.01
SYNE3Q6ZMZ3 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.48□□□□□ -2.01
SYNE3Q6ZMZ3 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.48□□□□□ -2.01
SYNE3Q6ZMZ3 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.48□□□□□ -2.01
SYNE3Q6ZMZ3 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.48□□□□□ -2.01
SYNE3Q6ZMZ3 AC009237.7-201ENST00000447357 229 ntBASIC2.48□□□□□ -2.01
SYNE3Q6ZMZ3 USP9YP23-201ENST00000455085 407 ntBASIC2.48□□□□□ -2.01
SYNE3Q6ZMZ3 AC079804.2-201ENST00000490376 200 ntBASIC2.48□□□□□ -2.01
SYNE3Q6ZMZ3 AC105758.1-201ENST00000506038 399 ntBASIC2.48□□□□□ -2.01
SYNE3Q6ZMZ3 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.48□□□□□ -2.01
SYNE3Q6ZMZ3 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.48□□□□□ -2.01
SYNE3Q6ZMZ3 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.48□□□□□ -2.01
SYNE3Q6ZMZ3 SNRPGP20-201ENST00000604477 205 ntBASIC2.48□□□□□ -2.01
SYNE3Q6ZMZ3 MIR1244-1-201ENST00000612829 85 ntBASIC2.48□□□□□ -2.01
SYNE3Q6ZMZ3 MIR1248-201ENST00000629190 106 ntBASIC2.48□□□□□ -2.01
SYNE3Q6ZMZ3 MIR1244-3-201ENST00000635744 85 ntBASIC2.48□□□□□ -2.01
SYNE3Q6ZMZ3 MIR1244-2-201ENST00000636449 85 ntBASIC2.48□□□□□ -2.01
SYNE3Q6ZMZ3 MIR1244-4-202ENST00000636813 85 ntBASIC2.48□□□□□ -2.01
SYNE3Q6ZMZ3 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.48□□□□□ -2.01
SYNE3Q6ZMZ3 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.48□□□□□ -2.01
SYNE3Q6ZMZ3 ZNF658B-202ENST00000615961 3375 ntBASIC2.48□□□□□ -2.01
SYNE3Q6ZMZ3 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
SYNE3Q6ZMZ3 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.47□□□□□ -2.01
SYNE3Q6ZMZ3 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
SYNE3Q6ZMZ3 MIR369-201ENST00000362155 70 ntBASIC2.47□□□□□ -2.01
SYNE3Q6ZMZ3 RNU6-222P-201ENST00000362438 107 ntBASIC2.47□□□□□ -2.01
SYNE3Q6ZMZ3 Y_RNA.128-201ENST00000363391 112 ntBASIC2.47□□□□□ -2.01
SYNE3Q6ZMZ3 Y_RNA.138-201ENST00000363462 102 ntBASIC2.47□□□□□ -2.01
SYNE3Q6ZMZ3 RNU5F-3P-201ENST00000363767 117 ntBASIC2.47□□□□□ -2.01
SYNE3Q6ZMZ3 RNU6-280P-201ENST00000364145 104 ntBASIC2.47□□□□□ -2.01
SYNE3Q6ZMZ3 Y_RNA.428-201ENST00000384078 102 ntBASIC2.47□□□□□ -2.01
SYNE3Q6ZMZ3 RNU6-474P-201ENST00000384243 107 ntBASIC2.47□□□□□ -2.01
SYNE3Q6ZMZ3 RNU6-301P-201ENST00000384277 107 ntBASIC2.47□□□□□ -2.01
SYNE3Q6ZMZ3 Y_RNA.592-201ENST00000410274 109 ntBASIC2.47□□□□□ -2.01
SYNE3Q6ZMZ3 PMCHL1-202ENST00000423102 261 ntBASIC2.47□□□□□ -2.01
SYNE3Q6ZMZ3 AC092423.1-201ENST00000430165 186 ntBASIC2.47□□□□□ -2.01
SYNE3Q6ZMZ3 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.47□□□□□ -2.01
SYNE3Q6ZMZ3 AC009238.1-201ENST00000442165 424 ntBASIC2.47□□□□□ -2.01
SYNE3Q6ZMZ3 AC007677.1-201ENST00000445757 515 ntBASIC2.47□□□□□ -2.01
SYNE3Q6ZMZ3 AC009237.6-201ENST00000446969 424 ntBASIC2.47□□□□□ -2.01
SYNE3Q6ZMZ3 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.47□□□□□ -2.01
SYNE3Q6ZMZ3 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.47□□□□□ -2.01
SYNE3Q6ZMZ3 RNU6-344P-201ENST00000516635 111 ntBASIC2.47□□□□□ -2.01
SYNE3Q6ZMZ3 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.47□□□□□ -2.01
SYNE3Q6ZMZ3 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.47□□□□□ -2.01
SYNE3Q6ZMZ3 MIR4719-201ENST00000585233 84 ntBASIC2.47□□□□□ -2.01
SYNE3Q6ZMZ3 AC125232.2-201ENST00000592457 143 ntBASIC2.47□□□□□ -2.01
SYNE3Q6ZMZ3 AC008873.1-201ENST00000625051 138 ntBASIC2.47□□□□□ -2.01
SYNE3Q6ZMZ3 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.47□□□□□ -2.01
SYNE3Q6ZMZ3 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
SYNE3Q6ZMZ3 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
SYNE3Q6ZMZ3 MTND5P16-201ENST00000460269 1703 ntBASIC2.46□□□□□ -2.02
SYNE3Q6ZMZ3 RNU6-873P-201ENST00000363833 107 ntBASIC2.46□□□□□ -2.02
SYNE3Q6ZMZ3 RNU6-1227P-201ENST00000383981 107 ntBASIC2.46□□□□□ -2.02
SYNE3Q6ZMZ3 RNU6-281P-201ENST00000384212 103 ntBASIC2.46□□□□□ -2.02
SYNE3Q6ZMZ3 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.46□□□□□ -2.02
SYNE3Q6ZMZ3 MTND1P14-201ENST00000427400 950 ntBASIC2.46□□□□□ -2.02
SYNE3Q6ZMZ3 WARS2P1-201ENST00000429678 537 ntBASIC2.46□□□□□ -2.02
SYNE3Q6ZMZ3 Y_RNA.631-201ENST00000459607 101 ntBASIC2.46□□□□□ -2.02
SYNE3Q6ZMZ3 RPS27P21-201ENST00000486977 252 ntBASIC2.46□□□□□ -2.02
SYNE3Q6ZMZ3 RNU6-1098P-201ENST00000516772 96 ntBASIC2.46□□□□□ -2.02
SYNE3Q6ZMZ3 SNORD116.3-201ENST00000517176 78 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms