Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 AC048344.4-201ENST00000619744 527 ntBASIC1.42□□□□□ -2.18
NIPAL3Q6P499 ICE2P2-201ENST00000483823 2787 ntBASIC1.42□□□□□ -2.18
NIPAL3Q6P499 AP000648.3-201ENST00000623539 4507 ntBASIC1.41□□□□□ -2.18
NIPAL3Q6P499 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
NIPAL3Q6P499 ZNF204P-201ENST00000416749 2397 ntBASIC1.41□□□□□ -2.18
NIPAL3Q6P499 RNU6-1252P-201ENST00000363054 104 ntBASIC1.41□□□□□ -2.18
NIPAL3Q6P499 SNORA63D-201ENST00000364359 132 ntBASIC1.41□□□□□ -2.18
NIPAL3Q6P499 RNU6-997P-201ENST00000384725 107 ntBASIC1.41□□□□□ -2.18
NIPAL3Q6P499 MIR586-201ENST00000385035 97 ntBASIC1.41□□□□□ -2.18
NIPAL3Q6P499 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
NIPAL3Q6P499 RNU6-908P-201ENST00000410160 94 ntBASIC1.41□□□□□ -2.18
NIPAL3Q6P499 Y_RNA.615-201ENST00000410769 117 ntBASIC1.41□□□□□ -2.18
NIPAL3Q6P499 AC004866.1-201ENST00000411748 78 ntBASIC1.41□□□□□ -2.18
NIPAL3Q6P499 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.41□□□□□ -2.18
NIPAL3Q6P499 PCMTD1P1-201ENST00000455560 355 ntBASIC1.41□□□□□ -2.18
NIPAL3Q6P499 RNU1-98P-201ENST00000458992 160 ntBASIC1.41□□□□□ -2.18
NIPAL3Q6P499 RNU6-1146P-201ENST00000516282 102 ntBASIC1.41□□□□□ -2.18
NIPAL3Q6P499 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.41□□□□□ -2.18
NIPAL3Q6P499 AC245505.1-201ENST00000556398 224 ntBASIC1.41□□□□□ -2.18
NIPAL3Q6P499 MIR4255-201ENST00000579351 72 ntBASIC1.41□□□□□ -2.18
NIPAL3Q6P499 AP001485.1-201ENST00000604799 199 ntBASIC1.41□□□□□ -2.18
NIPAL3Q6P499 BX248123.2-201ENST00000606318 124 ntBASIC1.41□□□□□ -2.18
NIPAL3Q6P499 MIR6715A-201ENST00000615929 79 ntBASIC1.41□□□□□ -2.18
NIPAL3Q6P499 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.41□□□□□ -2.18
NIPAL3Q6P499 MIR338-201ENST00000636369 67 ntBASIC1.41□□□□□ -2.18
NIPAL3Q6P499 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
NIPAL3Q6P499 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.41□□□□□ -2.18
NIPAL3Q6P499 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
NIPAL3Q6P499 Y_RNA.151-201ENST00000363566 112 ntBASIC1.4□□□□□ -2.19
NIPAL3Q6P499 RNU6-271P-201ENST00000363858 105 ntBASIC1.4□□□□□ -2.19
NIPAL3Q6P499 Y_RNA.194-201ENST00000363985 102 ntBASIC1.4□□□□□ -2.19
NIPAL3Q6P499 SNORA72.2-201ENST00000365028 127 ntBASIC1.4□□□□□ -2.19
NIPAL3Q6P499 MIR548B-201ENST00000385247 97 ntBASIC1.4□□□□□ -2.19
NIPAL3Q6P499 AL590002.1-201ENST00000406554 418 ntBASIC1.4□□□□□ -2.19
NIPAL3Q6P499 AC108210.2-201ENST00000503681 201 ntBASIC1.4□□□□□ -2.19
NIPAL3Q6P499 RNU6-314P-201ENST00000516574 104 ntBASIC1.4□□□□□ -2.19
NIPAL3Q6P499 SNORD53B-201ENST00000577887 78 ntBASIC1.4□□□□□ -2.19
NIPAL3Q6P499 AC104984.5-201ENST00000586878 94 ntBASIC1.4□□□□□ -2.19
NIPAL3Q6P499 AC006001.4-201ENST00000622243 395 ntBASIC1.4□□□□□ -2.19
NIPAL3Q6P499 AL078596.1-201ENST00000624856 447 ntBASIC1.4□□□□□ -2.19
NIPAL3Q6P499 AC099654.12-201ENST00000639868 649 ntBASIC1.4□□□□□ -2.19
NIPAL3Q6P499 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.4□□□□□ -2.19
NIPAL3Q6P499 snoU2-30.2-201ENST00000362805 70 ntBASIC1.39□□□□□ -2.19
NIPAL3Q6P499 Y_RNA.530-201ENST00000384587 101 ntBASIC1.39□□□□□ -2.19
NIPAL3Q6P499 MIR1253-201ENST00000408273 105 ntBASIC1.39□□□□□ -2.19
NIPAL3Q6P499 AC007098.1-201ENST00000420122 367 ntBASIC1.39□□□□□ -2.19
NIPAL3Q6P499 Z82205.1-201ENST00000428456 297 ntBASIC1.39□□□□□ -2.19
NIPAL3Q6P499 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC1.39□□□□□ -2.19
NIPAL3Q6P499 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.39□□□□□ -2.19
NIPAL3Q6P499 snoU13.23-201ENST00000458863 104 ntBASIC1.39□□□□□ -2.19
NIPAL3Q6P499 RNU7-57P-201ENST00000459540 60 ntBASIC1.39□□□□□ -2.19
NIPAL3Q6P499 HMGN2P26-201ENST00000463169 339 ntBASIC1.39□□□□□ -2.19
NIPAL3Q6P499 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC1.39□□□□□ -2.19
NIPAL3Q6P499 RNU6-506P-201ENST00000516553 94 ntBASIC1.39□□□□□ -2.19
NIPAL3Q6P499 RNA5SP54-201ENST00000516951 92 ntBASIC1.39□□□□□ -2.19
NIPAL3Q6P499 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.39□□□□□ -2.19
NIPAL3Q6P499 POLR3GP2-201ENST00000588366 668 ntBASIC1.39□□□□□ -2.19
NIPAL3Q6P499 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.39□□□□□ -2.19
NIPAL3Q6P499 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.39□□□□□ -2.19
NIPAL3Q6P499 SNORD50.1-201ENST00000362987 71 ntBASIC1.38□□□□□ -2.19
NIPAL3Q6P499 RNU1-17P-201ENST00000363022 152 ntBASIC1.38□□□□□ -2.19
NIPAL3Q6P499 RNY3P3-201ENST00000363816 102 ntBASIC1.38□□□□□ -2.19
NIPAL3Q6P499 U8.10-201ENST00000384260 133 ntBASIC1.38□□□□□ -2.19
NIPAL3Q6P499 Y_RNA.517-201ENST00000384551 106 ntBASIC1.38□□□□□ -2.19
NIPAL3Q6P499 MIR515-2-201ENST00000384883 83 ntBASIC1.38□□□□□ -2.19
NIPAL3Q6P499 MIR515-1-201ENST00000384884 83 ntBASIC1.38□□□□□ -2.19
NIPAL3Q6P499 MIR487A-201ENST00000385009 80 ntBASIC1.38□□□□□ -2.19
NIPAL3Q6P499 RNU6-57P-201ENST00000411348 103 ntBASIC1.38□□□□□ -2.19
NIPAL3Q6P499 COX6CP10-201ENST00000416832 224 ntBASIC1.38□□□□□ -2.19
NIPAL3Q6P499 AL513185.2-201ENST00000425543 193 ntBASIC1.38□□□□□ -2.19
NIPAL3Q6P499 HMGN2P34-201ENST00000437647 269 ntBASIC1.38□□□□□ -2.19
NIPAL3Q6P499 AC073910.1-201ENST00000445047 438 ntBASIC1.38□□□□□ -2.19
NIPAL3Q6P499 AC245517.4-201ENST00000448601 281 ntBASIC1.38□□□□□ -2.19
NIPAL3Q6P499 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.38□□□□□ -2.19
NIPAL3Q6P499 snoU13.27-201ENST00000459278 104 ntBASIC1.38□□□□□ -2.19
NIPAL3Q6P499 RPS26P55-201ENST00000471178 356 ntBASIC1.38□□□□□ -2.19
NIPAL3Q6P499 AC023790.1-201ENST00000482174 347 ntBASIC1.38□□□□□ -2.19
NIPAL3Q6P499 RNA5SP445-201ENST00000515889 115 ntBASIC1.38□□□□□ -2.19
NIPAL3Q6P499 RNU6-344P-201ENST00000516635 111 ntBASIC1.38□□□□□ -2.19
NIPAL3Q6P499 RNU1-117P-201ENST00000517041 158 ntBASIC1.38□□□□□ -2.19
NIPAL3Q6P499 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.38□□□□□ -2.19
NIPAL3Q6P499 AC015712.3-201ENST00000559380 164 ntBASIC1.38□□□□□ -2.19
NIPAL3Q6P499 AC023043.2-201ENST00000589678 1026 ntBASIC1.38□□□□□ -2.19
NIPAL3Q6P499 MIR1321-201ENST00000637766 79 ntBASIC1.38□□□□□ -2.19
NIPAL3Q6P499 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.38□□□□□ -2.19
NIPAL3Q6P499 RNU6-451P-201ENST00000362921 107 ntBASIC1.37□□□□□ -2.19
NIPAL3Q6P499 Y_RNA.256-201ENST00000364594 104 ntBASIC1.37□□□□□ -2.19
NIPAL3Q6P499 RNU4-9P-201ENST00000364951 139 ntBASIC1.37□□□□□ -2.19
NIPAL3Q6P499 RNU6-95P-201ENST00000384697 107 ntBASIC1.37□□□□□ -2.19
NIPAL3Q6P499 MIR32-201ENST00000384965 70 ntBASIC1.37□□□□□ -2.19
NIPAL3Q6P499 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.37□□□□□ -2.19
NIPAL3Q6P499 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.37□□□□□ -2.19
NIPAL3Q6P499 MTCO3P18-201ENST00000440206 761 ntBASIC1.37□□□□□ -2.19
NIPAL3Q6P499 DAP3P1-201ENST00000441522 278 ntBASIC1.37□□□□□ -2.19
NIPAL3Q6P499 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.37□□□□□ -2.19
NIPAL3Q6P499 MTCO2P30-201ENST00000503662 364 ntBASIC1.37□□□□□ -2.19
NIPAL3Q6P499 ACA59.1-201ENST00000515966 143 ntBASIC1.37□□□□□ -2.19
NIPAL3Q6P499 RNU6-1198P-201ENST00000516904 67 ntBASIC1.37□□□□□ -2.19
NIPAL3Q6P499 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.37□□□□□ -2.19
NIPAL3Q6P499 SNORD11B-201ENST00000607707 90 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 123.9 ms