Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 RNU6-578P-201ENST00000390980 103 ntBASIC3.2□□□□□ -1.9
HLA-DQA1Q5Y7H0 AL139281.1-201ENST00000422120 335 ntBASIC3.2□□□□□ -1.9
HLA-DQA1Q5Y7H0 AL162725.1-201ENST00000435405 301 ntBASIC3.2□□□□□ -1.9
HLA-DQA1Q5Y7H0 CR769767.1-201ENST00000436337 346 ntBASIC3.2□□□□□ -1.9
HLA-DQA1Q5Y7H0 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.2□□□□□ -1.9
HLA-DQA1Q5Y7H0 RNU7-141P-201ENST00000459304 62 ntBASIC3.2□□□□□ -1.9
HLA-DQA1Q5Y7H0 RPL21P10-201ENST00000463521 490 ntBASIC3.2□□□□□ -1.9
HLA-DQA1Q5Y7H0 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.2□□□□□ -1.9
HLA-DQA1Q5Y7H0 AC005840.1-201ENST00000498412 377 ntBASIC3.2□□□□□ -1.9
HLA-DQA1Q5Y7H0 SCARNA8-201ENST00000515924 131 ntBASIC3.2□□□□□ -1.9
HLA-DQA1Q5Y7H0 RN7SKP164-201ENST00000516138 266 ntBASIC3.2□□□□□ -1.9
HLA-DQA1Q5Y7H0 RNU5F-4P-201ENST00000516581 114 ntBASIC3.2□□□□□ -1.9
HLA-DQA1Q5Y7H0 RNU6-453P-201ENST00000516819 85 ntBASIC3.2□□□□□ -1.9
HLA-DQA1Q5Y7H0 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.2□□□□□ -1.9
HLA-DQA1Q5Y7H0 MIR4744-201ENST00000581563 82 ntBASIC3.2□□□□□ -1.9
HLA-DQA1Q5Y7H0 AC090616.3-201ENST00000582184 217 ntBASIC3.2□□□□□ -1.9
HLA-DQA1Q5Y7H0 MIR4765-201ENST00000585007 77 ntBASIC3.2□□□□□ -1.9
HLA-DQA1Q5Y7H0 MIR3922-201ENST00000585192 84 ntBASIC3.2□□□□□ -1.9
HLA-DQA1Q5Y7H0 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.2□□□□□ -1.9
HLA-DQA1Q5Y7H0 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.2□□□□□ -1.9
HLA-DQA1Q5Y7H0 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
HLA-DQA1Q5Y7H0 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
HLA-DQA1Q5Y7H0 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HLA-DQA1Q5Y7H0 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
HLA-DQA1Q5Y7H0 AL136164.4-201ENST00000625013 2135 ntBASIC3.19□□□□□ -1.9
HLA-DQA1Q5Y7H0 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC3.19□□□□□ -1.9
HLA-DQA1Q5Y7H0 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
HLA-DQA1Q5Y7H0 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
HLA-DQA1Q5Y7H0 Y_RNA.361-201ENST00000365515 120 ntBASIC3.19□□□□□ -1.9
HLA-DQA1Q5Y7H0 Y_RNA.456-201ENST00000384232 111 ntBASIC3.19□□□□□ -1.9
HLA-DQA1Q5Y7H0 RNU6-1117P-201ENST00000384525 104 ntBASIC3.19□□□□□ -1.9
HLA-DQA1Q5Y7H0 RNU6-1081P-201ENST00000384537 107 ntBASIC3.19□□□□□ -1.9
HLA-DQA1Q5Y7H0 MIR586-201ENST00000385035 97 ntBASIC3.19□□□□□ -1.9
HLA-DQA1Q5Y7H0 SNORA48.5-201ENST00000391143 135 ntBASIC3.19□□□□□ -1.9
HLA-DQA1Q5Y7H0 RNA5SP354-201ENST00000391247 136 ntBASIC3.19□□□□□ -1.9
HLA-DQA1Q5Y7H0 Z98941.1-201ENST00000407764 100 ntBASIC3.19□□□□□ -1.9
HLA-DQA1Q5Y7H0 RPS29P31-201ENST00000446147 164 ntBASIC3.19□□□□□ -1.9
HLA-DQA1Q5Y7H0 HMGN2P9-201ENST00000476875 229 ntBASIC3.19□□□□□ -1.9
HLA-DQA1Q5Y7H0 AC107934.2-201ENST00000518653 310 ntBASIC3.19□□□□□ -1.9
HLA-DQA1Q5Y7H0 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC3.19□□□□□ -1.9
HLA-DQA1Q5Y7H0 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.19□□□□□ -1.9
HLA-DQA1Q5Y7H0 AC103810.1-201ENST00000579873 453 ntBASIC3.19□□□□□ -1.9
HLA-DQA1Q5Y7H0 Y_RNA.802-201ENST00000614892 130 ntBASIC3.19□□□□□ -1.9
HLA-DQA1Q5Y7H0 Y_RNA.778-201ENST00000620203 90 ntBASIC3.19□□□□□ -1.9
HLA-DQA1Q5Y7H0 MIR6075-201ENST00000620782 95 ntBASIC3.19□□□□□ -1.9
HLA-DQA1Q5Y7H0 AC091895.1-201ENST00000624494 256 ntBASIC3.19□□□□□ -1.9
HLA-DQA1Q5Y7H0 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HLA-DQA1Q5Y7H0 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HLA-DQA1Q5Y7H0 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
HLA-DQA1Q5Y7H0 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HLA-DQA1Q5Y7H0 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.19□□□□□ -1.9
HLA-DQA1Q5Y7H0 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.19□□□□□ -1.9
HLA-DQA1Q5Y7H0 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
HLA-DQA1Q5Y7H0 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
HLA-DQA1Q5Y7H0 GABRG2-229ENST00000641017 3628 ntBASIC3.18□□□□□ -1.9
HLA-DQA1Q5Y7H0 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HLA-DQA1Q5Y7H0 RNA5SP295-201ENST00000362655 121 ntBASIC3.18□□□□□ -1.9
HLA-DQA1Q5Y7H0 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
HLA-DQA1Q5Y7H0 RNU6-239P-201ENST00000390990 99 ntBASIC3.18□□□□□ -1.9
HLA-DQA1Q5Y7H0 AL355497.1-201ENST00000406262 551 ntBASIC3.18□□□□□ -1.9
HLA-DQA1Q5Y7H0 MIR1185-2-201ENST00000408687 86 ntBASIC3.18□□□□□ -1.9
HLA-DQA1Q5Y7H0 EBAG9P1-201ENST00000418955 543 ntBASIC3.18□□□□□ -1.9
HLA-DQA1Q5Y7H0 PRSS3P4-201ENST00000453323 162 ntBASIC3.18□□□□□ -1.9
HLA-DQA1Q5Y7H0 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.18□□□□□ -1.9
HLA-DQA1Q5Y7H0 SCARNA17.1-201ENST00000516211 143 ntBASIC3.18□□□□□ -1.9
HLA-DQA1Q5Y7H0 SCARNA17.2-201ENST00000516334 143 ntBASIC3.18□□□□□ -1.9
HLA-DQA1Q5Y7H0 RNU6-426P-201ENST00000516464 97 ntBASIC3.18□□□□□ -1.9
HLA-DQA1Q5Y7H0 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.18□□□□□ -1.9
HLA-DQA1Q5Y7H0 RPL17P51-201ENST00000605218 238 ntBASIC3.18□□□□□ -1.9
HLA-DQA1Q5Y7H0 AC025754.2-201ENST00000606491 432 ntBASIC3.18□□□□□ -1.9
HLA-DQA1Q5Y7H0 MIR92B-201ENST00000607575 96 ntBASIC3.18□□□□□ -1.9
HLA-DQA1Q5Y7H0 SCARNA17.4-201ENST00000614296 143 ntBASIC3.18□□□□□ -1.9
HLA-DQA1Q5Y7H0 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HLA-DQA1Q5Y7H0 AL513302.2-201ENST00000562313 1842 ntBASIC3.18□□□□□ -1.9
HLA-DQA1Q5Y7H0 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
HLA-DQA1Q5Y7H0 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HLA-DQA1Q5Y7H0 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
HLA-DQA1Q5Y7H0 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
HLA-DQA1Q5Y7H0 Y_RNA.124-201ENST00000363339 93 ntBASIC3.17□□□□□ -1.9
HLA-DQA1Q5Y7H0 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.17□□□□□ -1.9
HLA-DQA1Q5Y7H0 RNU6-969P-201ENST00000383900 105 ntBASIC3.17□□□□□ -1.9
HLA-DQA1Q5Y7H0 RNU6-959P-201ENST00000384671 107 ntBASIC3.17□□□□□ -1.9
HLA-DQA1Q5Y7H0 SNORD17-201ENST00000390930 237 ntBASIC3.17□□□□□ -1.9
HLA-DQA1Q5Y7H0 AL139095.1-201ENST00000404326 391 ntBASIC3.17□□□□□ -1.9
HLA-DQA1Q5Y7H0 AC126124.2-201ENST00000413542 321 ntBASIC3.17□□□□□ -1.9
HLA-DQA1Q5Y7H0 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.17□□□□□ -1.9
HLA-DQA1Q5Y7H0 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC3.17□□□□□ -1.9
HLA-DQA1Q5Y7H0 AC245047.8-201ENST00000456455 284 ntBASIC3.17□□□□□ -1.9
HLA-DQA1Q5Y7H0 RNU7-14P-201ENST00000459331 62 ntBASIC3.17□□□□□ -1.9
HLA-DQA1Q5Y7H0 RPS29P2-201ENST00000479278 136 ntBASIC3.17□□□□□ -1.9
HLA-DQA1Q5Y7H0 RN7SL293P-201ENST00000481765 281 ntBASIC3.17□□□□□ -1.9
HLA-DQA1Q5Y7H0 RNU6-1007P-201ENST00000516586 107 ntBASIC3.17□□□□□ -1.9
HLA-DQA1Q5Y7H0 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.17□□□□□ -1.9
HLA-DQA1Q5Y7H0 MIR4431-201ENST00000579990 94 ntBASIC3.17□□□□□ -1.9
HLA-DQA1Q5Y7H0 AC012314.7-201ENST00000619693 93 ntBASIC3.17□□□□□ -1.9
HLA-DQA1Q5Y7H0 U7.8-201ENST00000619968 63 ntBASIC3.17□□□□□ -1.9
HLA-DQA1Q5Y7H0 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.17□□□□□ -1.9
HLA-DQA1Q5Y7H0 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.17□□□□□ -1.9
HLA-DQA1Q5Y7H0 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
HLA-DQA1Q5Y7H0 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms