Protein–RNA interactions for Protein: Q5T9S5

CCDC18, Coiled-coil domain-containing protein 18, humanhuman

Predictions only

Length 1,454 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18Q5T9S5 MIR301A-201ENST00000385261 86 ntBASIC-1.12□□□□□ -2.59
CCDC18Q5T9S5 MIR1207-201ENST00000408249 87 ntBASIC-1.12□□□□□ -2.59
CCDC18Q5T9S5 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC-1.12□□□□□ -2.59
CCDC18Q5T9S5 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC-1.12□□□□□ -2.59
CCDC18Q5T9S5 AC109446.1-201ENST00000566172 220 ntBASIC-1.12□□□□□ -2.59
CCDC18Q5T9S5 MIR3192-201ENST00000584920 77 ntBASIC-1.12□□□□□ -2.59
CCDC18Q5T9S5 AC091135.1-201ENST00000585943 307 ntBASIC-1.12□□□□□ -2.59
CCDC18Q5T9S5 uc_338.28-201ENST00000612082 187 ntBASIC-1.12□□□□□ -2.59
CCDC18Q5T9S5 MIR8054-201ENST00000620877 86 ntBASIC-1.12□□□□□ -2.59
CCDC18Q5T9S5 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.12□□□□□ -2.59
CCDC18Q5T9S5 RPS20P2-201ENST00000402520 389 ntBASIC-1.12□□□□□ -2.59
CCDC18Q5T9S5 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC-1.12□□□□□ -2.59
CCDC18Q5T9S5 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC-1.12□□□□□ -2.59
CCDC18Q5T9S5 MTCO2P7-201ENST00000446518 666 ntBASIC-1.12□□□□□ -2.59
CCDC18Q5T9S5 AP003716.2-201ENST00000528260 108 ntBASIC-1.12□□□□□ -2.59
CCDC18Q5T9S5 AL356596.1-201ENST00000624230 379 ntBASIC-1.12□□□□□ -2.59
CCDC18Q5T9S5 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC-1.13□□□□□ -2.59
CCDC18Q5T9S5 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC-1.13□□□□□ -2.59
CCDC18Q5T9S5 AL606517.2-201ENST00000442855 241 ntBASIC-1.13□□□□□ -2.59
CCDC18Q5T9S5 ZNF886P-201ENST00000450781 723 ntBASIC-1.13□□□□□ -2.59
CCDC18Q5T9S5 MIR548AO-201ENST00000579992 96 ntBASIC-1.13□□□□□ -2.59
CCDC18Q5T9S5 RBM11P1-201ENST00000604951 799 ntBASIC-1.13□□□□□ -2.59
CCDC18Q5T9S5 RNU6-839P-201ENST00000363347 108 ntBASIC-1.14□□□□□ -2.59
CCDC18Q5T9S5 SNORA33-201ENST00000363664 130 ntBASIC-1.14□□□□□ -2.59
CCDC18Q5T9S5 RNU6-819P-201ENST00000364116 107 ntBASIC-1.14□□□□□ -2.59
CCDC18Q5T9S5 Y_RNA.288-201ENST00000364854 92 ntBASIC-1.14□□□□□ -2.59
CCDC18Q5T9S5 MIR520G-201ENST00000385064 90 ntBASIC-1.14□□□□□ -2.59
CCDC18Q5T9S5 MIR520H-201ENST00000385126 88 ntBASIC-1.14□□□□□ -2.59
CCDC18Q5T9S5 RNU6-440P-201ENST00000390882 105 ntBASIC-1.14□□□□□ -2.59
CCDC18Q5T9S5 MTCO1P20-201ENST00000425366 358 ntBASIC-1.14□□□□□ -2.59
CCDC18Q5T9S5 snoU109.2-201ENST00000459316 135 ntBASIC-1.14□□□□□ -2.59
CCDC18Q5T9S5 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC-1.14□□□□□ -2.59
CCDC18Q5T9S5 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC-1.14□□□□□ -2.59
CCDC18Q5T9S5 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC-1.14□□□□□ -2.59
CCDC18Q5T9S5 RNA5SP467-201ENST00000391274 118 ntBASIC-1.15□□□□□ -2.59
CCDC18Q5T9S5 EIF4E2P1-201ENST00000393781 255 ntBASIC-1.15□□□□□ -2.59
CCDC18Q5T9S5 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC-1.15□□□□□ -2.59
CCDC18Q5T9S5 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC-1.15□□□□□ -2.59
CCDC18Q5T9S5 LRRC6P1-201ENST00000532188 885 ntBASIC-1.15□□□□□ -2.59
CCDC18Q5T9S5 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC-1.15□□□□□ -2.59
CCDC18Q5T9S5 SCARNA4-202ENST00000625402 129 ntBASIC-1.15□□□□□ -2.59
CCDC18Q5T9S5 Y_RNA.203-201ENST00000364106 102 ntBASIC-1.16□□□□□ -2.59
CCDC18Q5T9S5 MTND4P25-201ENST00000441039 533 ntBASIC-1.16□□□□□ -2.59
CCDC18Q5T9S5 AP000484.1-201ENST00000620067 1252 ntBASIC-1.16□□□□□ -2.59
CCDC18Q5T9S5 MIR4320-201ENST00000636981 65 ntBASIC-1.16□□□□□ -2.59
CCDC18Q5T9S5 RNU6-1207P-201ENST00000384343 107 ntBASIC-1.17□□□□□ -2.6
CCDC18Q5T9S5 SNORA12.1-201ENST00000390873 148 ntBASIC-1.17□□□□□ -2.6
CCDC18Q5T9S5 MIR1185-1-201ENST00000408598 86 ntBASIC-1.17□□□□□ -2.6
CCDC18Q5T9S5 RNU6-1025P-201ENST00000410629 104 ntBASIC-1.17□□□□□ -2.6
CCDC18Q5T9S5 UBE2D3P3-201ENST00000426992 425 ntBASIC-1.17□□□□□ -2.6
CCDC18Q5T9S5 RNU7-129P-201ENST00000516128 62 ntBASIC-1.17□□□□□ -2.6
CCDC18Q5T9S5 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC-1.17□□□□□ -2.6
CCDC18Q5T9S5 MIR378F-201ENST00000578143 78 ntBASIC-1.17□□□□□ -2.6
CCDC18Q5T9S5 AL162424.1-201ENST00000602325 221 ntBASIC-1.17□□□□□ -2.6
CCDC18Q5T9S5 AC090617.9-201ENST00000623751 147 ntBASIC-1.17□□□□□ -2.6
CCDC18Q5T9S5 AC112487.2-201ENST00000637950 304 ntBASIC-1.17□□□□□ -2.6
CCDC18Q5T9S5 RNU6-10P-201ENST00000384036 107 ntBASIC-1.18□□□□□ -2.6
CCDC18Q5T9S5 RNU6-15P-201ENST00000384534 107 ntBASIC-1.18□□□□□ -2.6
CCDC18Q5T9S5 MIR196A1-201ENST00000388006 70 ntBASIC-1.18□□□□□ -2.6
CCDC18Q5T9S5 AL365338.1-201ENST00000422282 858 ntBASIC-1.18□□□□□ -2.6
CCDC18Q5T9S5 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC-1.18□□□□□ -2.6
CCDC18Q5T9S5 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC-1.18□□□□□ -2.6
CCDC18Q5T9S5 MRPS10P2-201ENST00000431226 381 ntBASIC-1.18□□□□□ -2.6
CCDC18Q5T9S5 AC092427.1-201ENST00000439177 601 ntBASIC-1.18□□□□□ -2.6
CCDC18Q5T9S5 RNU5F-4P-201ENST00000516581 114 ntBASIC-1.18□□□□□ -2.6
CCDC18Q5T9S5 BX322639.1-202ENST00000423987 2213 ntBASIC-1.18□□□□□ -2.6
CCDC18Q5T9S5 RNU6-480P-201ENST00000384332 107 ntBASIC-1.18□□□□□ -2.6
CCDC18Q5T9S5 MIR7-1-201ENST00000384871 110 ntBASIC-1.18□□□□□ -2.6
CCDC18Q5T9S5 TIMM9P3-201ENST00000428659 274 ntBASIC-1.18□□□□□ -2.6
CCDC18Q5T9S5 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC-1.18□□□□□ -2.6
CCDC18Q5T9S5 MTND3P5-201ENST00000512798 333 ntBASIC-1.18□□□□□ -2.6
CCDC18Q5T9S5 RNU6-1278P-201ENST00000516130 107 ntBASIC-1.18□□□□□ -2.6
CCDC18Q5T9S5 RNU6-1098P-201ENST00000516772 96 ntBASIC-1.18□□□□□ -2.6
CCDC18Q5T9S5 OR8K2P-201ENST00000524645 927 ntBASIC-1.18□□□□□ -2.6
CCDC18Q5T9S5 MIR6755-201ENST00000619993 66 ntBASIC-1.18□□□□□ -2.6
CCDC18Q5T9S5 MIR412-201ENST00000362142 91 ntBASIC-1.19□□□□□ -2.6
CCDC18Q5T9S5 SNORD56.1-201ENST00000362913 68 ntBASIC-1.19□□□□□ -2.6
CCDC18Q5T9S5 SMIM11P1-201ENST00000369586 178 ntBASIC-1.19□□□□□ -2.6
CCDC18Q5T9S5 Y_RNA.416-201ENST00000384014 113 ntBASIC-1.19□□□□□ -2.6
CCDC18Q5T9S5 AC013828.2-201ENST00000532487 235 ntBASIC-1.19□□□□□ -2.6
CCDC18Q5T9S5 snoU2-30.2-201ENST00000362805 70 ntBASIC-1.2□□□□□ -2.6
CCDC18Q5T9S5 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC-1.2□□□□□ -2.6
CCDC18Q5T9S5 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC-1.2□□□□□ -2.6
CCDC18Q5T9S5 SCARNA17-201ENST00000516183 144 ntBASIC-1.2□□□□□ -2.6
CCDC18Q5T9S5 RNU6-1146P-201ENST00000516282 102 ntBASIC-1.2□□□□□ -2.6
CCDC18Q5T9S5 AC115990.1-201ENST00000526957 301 ntBASIC-1.2□□□□□ -2.6
CCDC18Q5T9S5 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC-1.2□□□□□ -2.6
CCDC18Q5T9S5 MIR4788-201ENST00000639104 80 ntBASIC-1.2□□□□□ -2.6
CCDC18Q5T9S5 RNU6-1026P-201ENST00000384465 108 ntBASIC-1.21□□□□□ -2.6
CCDC18Q5T9S5 MIR454-201ENST00000390180 115 ntBASIC-1.21□□□□□ -2.6
CCDC18Q5T9S5 MIR548L-201ENST00000408303 86 ntBASIC-1.21□□□□□ -2.6
CCDC18Q5T9S5 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC-1.21□□□□□ -2.6
CCDC18Q5T9S5 AC109445.1-201ENST00000512356 383 ntBASIC-1.21□□□□□ -2.6
CCDC18Q5T9S5 SNORD111.1-201ENST00000516421 86 ntBASIC-1.21□□□□□ -2.6
CCDC18Q5T9S5 MIR4436A-201ENST00000585278 85 ntBASIC-1.21□□□□□ -2.6
CCDC18Q5T9S5 AC024940.5-201ENST00000622889 474 ntBASIC-1.21□□□□□ -2.6
CCDC18Q5T9S5 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC-1.21□□□□□ -2.6
CCDC18Q5T9S5 Y_RNA.65-201ENST00000362846 100 ntBASIC-1.22□□□□□ -2.6
CCDC18Q5T9S5 SNORD83B-201ENST00000386745 93 ntBASIC-1.22□□□□□ -2.6
CCDC18Q5T9S5 AL359634.1-202ENST00000404721 284 ntBASIC-1.22□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms