Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SNAP47Q5SQN1 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
SNAP47Q5SQN1 MIR491-201ENST00000384877 84 ntBASIC3.45□□□□□ -1.86
SNAP47Q5SQN1 RNU6-763P-201ENST00000390865 106 ntBASIC3.45□□□□□ -1.86
SNAP47Q5SQN1 AL139095.1-201ENST00000404326 391 ntBASIC3.45□□□□□ -1.86
SNAP47Q5SQN1 RNU6-710P-201ENST00000410424 105 ntBASIC3.45□□□□□ -1.86
SNAP47Q5SQN1 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.45□□□□□ -1.86
SNAP47Q5SQN1 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.45□□□□□ -1.86
SNAP47Q5SQN1 PHBP14-201ENST00000512887 367 ntBASIC3.45□□□□□ -1.86
SNAP47Q5SQN1 RNU6-1212P-201ENST00000517023 104 ntBASIC3.45□□□□□ -1.86
SNAP47Q5SQN1 AC109329.2-201ENST00000519658 482 ntBASIC3.45□□□□□ -1.86
SNAP47Q5SQN1 NDUFB9P3-201ENST00000521269 501 ntBASIC3.45□□□□□ -1.86
SNAP47Q5SQN1 MIR4425-201ENST00000580572 84 ntBASIC3.45□□□□□ -1.86
SNAP47Q5SQN1 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC3.45□□□□□ -1.86
SNAP47Q5SQN1 AL078604.3-201ENST00000615580 211 ntBASIC3.45□□□□□ -1.86
SNAP47Q5SQN1 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
SNAP47Q5SQN1 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
SNAP47Q5SQN1 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SNAP47Q5SQN1 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SNAP47Q5SQN1 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SNAP47Q5SQN1 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.44□□□□□ -1.86
SNAP47Q5SQN1 RNU4-35P-201ENST00000362588 141 ntBASIC3.44□□□□□ -1.86
SNAP47Q5SQN1 RNU6-525P-201ENST00000363685 104 ntBASIC3.44□□□□□ -1.86
SNAP47Q5SQN1 AL357075.1-201ENST00000404107 726 ntBASIC3.44□□□□□ -1.86
SNAP47Q5SQN1 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.44□□□□□ -1.86
SNAP47Q5SQN1 NDUFB1P1-201ENST00000435191 180 ntBASIC3.44□□□□□ -1.86
SNAP47Q5SQN1 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.44□□□□□ -1.86
SNAP47Q5SQN1 BX510359.1-201ENST00000456973 237 ntBASIC3.44□□□□□ -1.86
SNAP47Q5SQN1 ATP5EP1-201ENST00000510257 156 ntBASIC3.44□□□□□ -1.86
SNAP47Q5SQN1 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.44□□□□□ -1.86
SNAP47Q5SQN1 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.44□□□□□ -1.86
SNAP47Q5SQN1 AC136628.3-201ENST00000521868 290 ntBASIC3.44□□□□□ -1.86
SNAP47Q5SQN1 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.44□□□□□ -1.86
SNAP47Q5SQN1 CARD18-203ENST00000532895 422 ntTSL 2 BASIC3.44□□□□□ -1.86
SNAP47Q5SQN1 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC3.44□□□□□ -1.86
SNAP47Q5SQN1 MIR4753-201ENST00000585119 83 ntBASIC3.44□□□□□ -1.86
SNAP47Q5SQN1 AC069294.1-201ENST00000608397 350 ntBASIC3.44□□□□□ -1.86
SNAP47Q5SQN1 MIR7851-201ENST00000610611 160 ntBASIC3.44□□□□□ -1.86
SNAP47Q5SQN1 AC099778.2-201ENST00000610904 211 ntBASIC3.44□□□□□ -1.86
SNAP47Q5SQN1 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
SNAP47Q5SQN1 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
SNAP47Q5SQN1 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.44□□□□□ -1.86
SNAP47Q5SQN1 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
SNAP47Q5SQN1 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SNAP47Q5SQN1 AC073346.2-201ENST00000624724 2058 ntBASIC3.43□□□□□ -1.86
SNAP47Q5SQN1 AC058791.1-201ENST00000608412 3198 ntBASIC3.43□□□□□ -1.86
SNAP47Q5SQN1 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SNAP47Q5SQN1 Z82209.1-201ENST00000422141 2135 ntBASIC3.43□□□□□ -1.86
SNAP47Q5SQN1 RNU6-801P-201ENST00000364087 105 ntBASIC3.43□□□□□ -1.86
SNAP47Q5SQN1 CYCSP4-201ENST00000429682 331 ntBASIC3.43□□□□□ -1.86
SNAP47Q5SQN1 AC074290.1-201ENST00000448883 135 ntBASIC3.43□□□□□ -1.86
SNAP47Q5SQN1 AC090515.1-201ENST00000465295 476 ntBASIC3.43□□□□□ -1.86
SNAP47Q5SQN1 AC114982.1-201ENST00000469402 321 ntBASIC3.43□□□□□ -1.86
SNAP47Q5SQN1 Y_RNA.662-201ENST00000516028 97 ntBASIC3.43□□□□□ -1.86
SNAP47Q5SQN1 RN7SKP83-201ENST00000516512 178 ntBASIC3.43□□□□□ -1.86
SNAP47Q5SQN1 RNU6-255P-201ENST00000516957 105 ntBASIC3.43□□□□□ -1.86
SNAP47Q5SQN1 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.43□□□□□ -1.86
SNAP47Q5SQN1 MIR3684-201ENST00000579779 74 ntBASIC3.43□□□□□ -1.86
SNAP47Q5SQN1 U6.106-201ENST00000636360 105 ntBASIC3.43□□□□□ -1.86
SNAP47Q5SQN1 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SNAP47Q5SQN1 AC103988.1-201ENST00000566382 2177 ntBASIC3.43□□□□□ -1.86
SNAP47Q5SQN1 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.43□□□□□ -1.86
SNAP47Q5SQN1 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SNAP47Q5SQN1 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.43□□□□□ -1.86
SNAP47Q5SQN1 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
SNAP47Q5SQN1 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.43□□□□□ -1.86
SNAP47Q5SQN1 AC080128.1-201ENST00000474389 1917 ntBASIC3.42□□□□□ -1.86
SNAP47Q5SQN1 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SNAP47Q5SQN1 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.42□□□□□ -1.86
SNAP47Q5SQN1 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.42□□□□□ -1.86
SNAP47Q5SQN1 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SNAP47Q5SQN1 Y_RNA.240-201ENST00000364469 95 ntBASIC3.42□□□□□ -1.86
SNAP47Q5SQN1 MIR483-201ENST00000385070 76 ntBASIC3.42□□□□□ -1.86
SNAP47Q5SQN1 AL357139.1-201ENST00000407792 426 ntBASIC3.42□□□□□ -1.86
SNAP47Q5SQN1 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.42□□□□□ -1.86
SNAP47Q5SQN1 AC006539.3-201ENST00000454258 129 ntBASIC3.42□□□□□ -1.86
SNAP47Q5SQN1 RNU7-57P-201ENST00000459540 60 ntBASIC3.42□□□□□ -1.86
SNAP47Q5SQN1 TRAPPC2P7-201ENST00000509650 231 ntBASIC3.42□□□□□ -1.86
SNAP47Q5SQN1 HMGB3P3-201ENST00000510526 400 ntBASIC3.42□□□□□ -1.86
SNAP47Q5SQN1 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.42□□□□□ -1.86
SNAP47Q5SQN1 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.42□□□□□ -1.86
SNAP47Q5SQN1 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.42□□□□□ -1.86
SNAP47Q5SQN1 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.42□□□□□ -1.86
SNAP47Q5SQN1 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.42□□□□□ -1.86
SNAP47Q5SQN1 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.42□□□□□ -1.86
SNAP47Q5SQN1 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.42□□□□□ -1.86
SNAP47Q5SQN1 SNORA50A-202ENST00000629536 136 ntBASIC3.42□□□□□ -1.86
SNAP47Q5SQN1 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.42□□□□□ -1.86
SNAP47Q5SQN1 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
SNAP47Q5SQN1 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SNAP47Q5SQN1 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SNAP47Q5SQN1 Y_RNA.368-201ENST00000365547 113 ntBASIC3.41□□□□□ -1.86
SNAP47Q5SQN1 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
SNAP47Q5SQN1 SNORA40.19-201ENST00000390846 128 ntBASIC3.41□□□□□ -1.86
SNAP47Q5SQN1 SNORA26.5-201ENST00000391215 123 ntBASIC3.41□□□□□ -1.86
SNAP47Q5SQN1 RNU6-855P-201ENST00000410395 104 ntBASIC3.41□□□□□ -1.86
SNAP47Q5SQN1 RN7SKP51-201ENST00000410781 304 ntBASIC3.41□□□□□ -1.86
SNAP47Q5SQN1 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.41□□□□□ -1.86
SNAP47Q5SQN1 U8.19-201ENST00000459095 133 ntBASIC3.41□□□□□ -1.86
SNAP47Q5SQN1 AC080013.2-201ENST00000460866 323 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 167.8 ms