Protein–RNA interactions for Protein: Q53F19

NCBP3, Nuclear cap-binding protein subunit 3, humanhuman

Known RBP Predictions only

Length 620 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3Q53F19 RNA5SP38-201ENST00000410750 119 ntBASIC6.44□□□□□ -1.38
NCBP3Q53F19 AC123900.1-201ENST00000420390 96 ntBASIC6.44□□□□□ -1.38
NCBP3Q53F19 AC092017.2-201ENST00000427600 362 ntBASIC6.44□□□□□ -1.38
NCBP3Q53F19 RN7SL558P-201ENST00000497468 299 ntBASIC6.44□□□□□ -1.38
NCBP3Q53F19 PHBP14-201ENST00000512887 367 ntBASIC6.44□□□□□ -1.38
NCBP3Q53F19 AP002004.2-201ENST00000531656 154 ntBASIC6.44□□□□□ -1.38
NCBP3Q53F19 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
NCBP3Q53F19 AC096720.1-201ENST00000604441 183 ntBASIC6.44□□□□□ -1.38
NCBP3Q53F19 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
NCBP3Q53F19 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC6.44□□□□□ -1.38
NCBP3Q53F19 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
NCBP3Q53F19 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
NCBP3Q53F19 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
NCBP3Q53F19 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
NCBP3Q53F19 RNA5SP252-201ENST00000391131 119 ntBASIC6.43□□□□□ -1.38
NCBP3Q53F19 APOA2-207ENST00000470459 416 ntTSL 5 BASIC6.43□□□□□ -1.38
NCBP3Q53F19 AC106707.2-201ENST00000484182 374 ntBASIC6.43□□□□□ -1.38
NCBP3Q53F19 RN7SKP57-201ENST00000517248 293 ntBASIC6.43□□□□□ -1.38
NCBP3Q53F19 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC6.43□□□□□ -1.38
NCBP3Q53F19 MIR4472-2-201ENST00000582069 67 ntBASIC6.43□□□□□ -1.38
NCBP3Q53F19 AL512310.12-203ENST00000640543 90 ntBASIC6.43□□□□□ -1.38
NCBP3Q53F19 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
NCBP3Q53F19 AL672167.1-203ENST00000641299 2975 ntBASIC6.43□□□□□ -1.38
NCBP3Q53F19 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC6.43□□□□□ -1.38
NCBP3Q53F19 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC6.43□□□□□ -1.38
NCBP3Q53F19 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
NCBP3Q53F19 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
NCBP3Q53F19 RNU6-616P-201ENST00000384353 107 ntBASIC6.42□□□□□ -1.38
NCBP3Q53F19 MIR767-201ENST00000390228 109 ntBASIC6.42□□□□□ -1.38
NCBP3Q53F19 AL645733.1-201ENST00000402250 217 ntBASIC6.42□□□□□ -1.38
NCBP3Q53F19 RPL32P35-201ENST00000415214 394 ntBASIC6.42□□□□□ -1.38
NCBP3Q53F19 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC6.42□□□□□ -1.38
NCBP3Q53F19 RN7SL481P-201ENST00000477764 299 ntBASIC6.42□□□□□ -1.38
NCBP3Q53F19 MIR6748-201ENST00000610433 71 ntBASIC6.42□□□□□ -1.38
NCBP3Q53F19 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC6.42□□□□□ -1.38
NCBP3Q53F19 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC6.42□□□□□ -1.38
NCBP3Q53F19 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
NCBP3Q53F19 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC6.41□□□□□ -1.38
NCBP3Q53F19 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC6.41□□□□□ -1.38
NCBP3Q53F19 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
NCBP3Q53F19 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC6.41□□□□□ -1.38
NCBP3Q53F19 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC6.41□□□□□ -1.38
NCBP3Q53F19 CKS1BP6-201ENST00000424932 240 ntBASIC6.41□□□□□ -1.38
NCBP3Q53F19 SNORD45.4-201ENST00000516629 73 ntBASIC6.41□□□□□ -1.38
NCBP3Q53F19 AL121932.1-201ENST00000605542 214 ntBASIC6.41□□□□□ -1.38
NCBP3Q53F19 AC021613.1-201ENST00000623880 111 ntBASIC6.41□□□□□ -1.38
NCBP3Q53F19 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
NCBP3Q53F19 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC6.4□□□□□ -1.38
NCBP3Q53F19 AL450345.1-202ENST00000605741 3881 ntBASIC6.4□□□□□ -1.38
NCBP3Q53F19 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
NCBP3Q53F19 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
NCBP3Q53F19 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
NCBP3Q53F19 RNU6-546P-201ENST00000383991 107 ntBASIC6.4□□□□□ -1.38
NCBP3Q53F19 SCARNA22-201ENST00000503991 125 ntBASIC6.4□□□□□ -1.38
NCBP3Q53F19 RNU6-1006P-201ENST00000516998 103 ntBASIC6.4□□□□□ -1.38
NCBP3Q53F19 TVP23BP1-201ENST00000557500 617 ntBASIC6.4□□□□□ -1.38
NCBP3Q53F19 MIR4436B2-201ENST00000581415 91 ntBASIC6.4□□□□□ -1.38
NCBP3Q53F19 MIR4436B1-201ENST00000583272 91 ntBASIC6.4□□□□□ -1.38
NCBP3Q53F19 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC6.4□□□□□ -1.39
NCBP3Q53F19 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
NCBP3Q53F19 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
NCBP3Q53F19 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
NCBP3Q53F19 RNA5SP123-201ENST00000363244 119 ntBASIC6.39□□□□□ -1.39
NCBP3Q53F19 Y_RNA.430-201ENST00000384081 110 ntBASIC6.39□□□□□ -1.39
NCBP3Q53F19 RNU1-142P-201ENST00000516682 145 ntBASIC6.39□□□□□ -1.39
NCBP3Q53F19 SNORA74C-1-201ENST00000580726 201 ntBASIC6.39□□□□□ -1.39
NCBP3Q53F19 MIR4646-201ENST00000580775 63 ntBASIC6.39□□□□□ -1.39
NCBP3Q53F19 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
NCBP3Q53F19 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC6.39□□□□□ -1.39
NCBP3Q53F19 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
NCBP3Q53F19 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
NCBP3Q53F19 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
NCBP3Q53F19 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC6.38□□□□□ -1.39
NCBP3Q53F19 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
NCBP3Q53F19 RNU6-633P-201ENST00000362612 103 ntBASIC6.38□□□□□ -1.39
NCBP3Q53F19 MIR591-201ENST00000385290 95 ntBASIC6.38□□□□□ -1.39
NCBP3Q53F19 RN7SKP125-201ENST00000410481 302 ntBASIC6.38□□□□□ -1.39
NCBP3Q53F19 AL590762.4-201ENST00000425885 253 ntBASIC6.38□□□□□ -1.39
NCBP3Q53F19 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC6.38□□□□□ -1.39
NCBP3Q53F19 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC6.38□□□□□ -1.39
NCBP3Q53F19 RNU6-991P-201ENST00000516168 107 ntBASIC6.38□□□□□ -1.39
NCBP3Q53F19 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC6.38□□□□□ -1.39
NCBP3Q53F19 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC6.38□□□□□ -1.39
NCBP3Q53F19 MIR5699-201ENST00000578903 90 ntBASIC6.38□□□□□ -1.39
NCBP3Q53F19 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC6.38□□□□□ -1.39
NCBP3Q53F19 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
NCBP3Q53F19 U6.108-201ENST00000637764 58 ntBASIC6.38□□□□□ -1.39
NCBP3Q53F19 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
NCBP3Q53F19 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
NCBP3Q53F19 RALGAPA1P1-201ENST00000443361 6232 ntBASIC6.37□□□□□ -1.39
NCBP3Q53F19 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
NCBP3Q53F19 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
NCBP3Q53F19 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
NCBP3Q53F19 SNORD77B-201ENST00000391112 67 ntBASIC6.37□□□□□ -1.39
NCBP3Q53F19 AL590139.1-201ENST00000416267 400 ntBASIC6.37□□□□□ -1.39
NCBP3Q53F19 POLR2J4-204ENST00000418424 324 ntBASIC6.37□□□□□ -1.39
NCBP3Q53F19 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC6.37□□□□□ -1.39
NCBP3Q53F19 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC6.37□□□□□ -1.39
NCBP3Q53F19 RNU7-113P-201ENST00000459273 62 ntBASIC6.37□□□□□ -1.39
NCBP3Q53F19 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 152.6 ms