Protein–RNA interactions for Protein: Q08043

ACTN3, Alpha-actinin-3, humanhuman

Predicted RBP Predictions only

Length 901 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN3Q08043 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.59□□□□□ -2.15
ACTN3Q08043 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC1.59□□□□□ -2.15
ACTN3Q08043 ICE2P2-201ENST00000483823 2787 ntBASIC1.59□□□□□ -2.15
ACTN3Q08043 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
ACTN3Q08043 RNU6-254P-201ENST00000363377 107 ntBASIC1.58□□□□□ -2.16
ACTN3Q08043 RNU6-271P-201ENST00000363858 105 ntBASIC1.58□□□□□ -2.16
ACTN3Q08043 RNA5SP213-201ENST00000391031 106 ntBASIC1.58□□□□□ -2.16
ACTN3Q08043 RNU6-1068P-201ENST00000410958 103 ntBASIC1.58□□□□□ -2.16
ACTN3Q08043 AC019235.1-201ENST00000503847 207 ntBASIC1.58□□□□□ -2.16
ACTN3Q08043 MIR3683-201ENST00000580847 82 ntBASIC1.58□□□□□ -2.16
ACTN3Q08043 AC126177.8-201ENST00000618339 1015 ntBASIC1.58□□□□□ -2.16
ACTN3Q08043 MIR338-201ENST00000636369 67 ntBASIC1.58□□□□□ -2.16
ACTN3Q08043 AC100821.1-201ENST00000523153 2479 ntBASIC1.58□□□□□ -2.16
ACTN3Q08043 AC006026.1-201ENST00000444025 1803 ntBASIC1.57□□□□□ -2.16
ACTN3Q08043 RNU6-1305P-201ENST00000364353 104 ntBASIC1.57□□□□□ -2.16
ACTN3Q08043 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.57□□□□□ -2.16
ACTN3Q08043 HMGN2P9-201ENST00000476875 229 ntBASIC1.57□□□□□ -2.16
ACTN3Q08043 RPL23AP75-201ENST00000491601 451 ntBASIC1.57□□□□□ -2.16
ACTN3Q08043 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.57□□□□□ -2.16
ACTN3Q08043 RNU6-344P-201ENST00000516635 111 ntBASIC1.57□□□□□ -2.16
ACTN3Q08043 RNU6-902P-201ENST00000517212 91 ntBASIC1.57□□□□□ -2.16
ACTN3Q08043 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.57□□□□□ -2.16
ACTN3Q08043 AC024909.2-201ENST00000553035 286 ntBASIC1.57□□□□□ -2.16
ACTN3Q08043 NDUFAF4P1-201ENST00000559425 519 ntBASIC1.57□□□□□ -2.16
ACTN3Q08043 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.57□□□□□ -2.16
ACTN3Q08043 SCARNA4-201ENST00000629045 128 ntBASIC1.57□□□□□ -2.16
ACTN3Q08043 snoU2-30.2-201ENST00000362805 70 ntBASIC1.56□□□□□ -2.16
ACTN3Q08043 RNU6-245P-201ENST00000384020 107 ntBASIC1.56□□□□□ -2.16
ACTN3Q08043 RNU6-790P-201ENST00000384479 105 ntBASIC1.56□□□□□ -2.16
ACTN3Q08043 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.56□□□□□ -2.16
ACTN3Q08043 SNORD13-201ENST00000459299 104 ntBASIC1.56□□□□□ -2.16
ACTN3Q08043 RPS26P55-201ENST00000471178 356 ntBASIC1.56□□□□□ -2.16
ACTN3Q08043 AC016957.1-201ENST00000534895 309 ntBASIC1.56□□□□□ -2.16
ACTN3Q08043 SNORA59B-202ENST00000578183 701 ntBASIC1.56□□□□□ -2.16
ACTN3Q08043 MIR8063-201ENST00000621930 81 ntBASIC1.56□□□□□ -2.16
ACTN3Q08043 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.55□□□□□ -2.16
ACTN3Q08043 Y_RNA.140-201ENST00000363474 103 ntBASIC1.55□□□□□ -2.16
ACTN3Q08043 Y_RNA.373-201ENST00000365600 103 ntBASIC1.55□□□□□ -2.16
ACTN3Q08043 COX6CP10-201ENST00000416832 224 ntBASIC1.55□□□□□ -2.16
ACTN3Q08043 AC007098.1-201ENST00000420122 367 ntBASIC1.55□□□□□ -2.16
ACTN3Q08043 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.55□□□□□ -2.16
ACTN3Q08043 AC016717.1-201ENST00000448918 286 ntBASIC1.55□□□□□ -2.16
ACTN3Q08043 PCMTD1P1-201ENST00000455560 355 ntBASIC1.55□□□□□ -2.16
ACTN3Q08043 snoU13.27-201ENST00000459278 104 ntBASIC1.55□□□□□ -2.16
ACTN3Q08043 AC079140.2-201ENST00000506193 142 ntBASIC1.55□□□□□ -2.16
ACTN3Q08043 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.55□□□□□ -2.16
ACTN3Q08043 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.55□□□□□ -2.16
ACTN3Q08043 AC010525.2-201ENST00000590920 195 ntBASIC1.55□□□□□ -2.16
ACTN3Q08043 AP001485.1-201ENST00000604799 199 ntBASIC1.55□□□□□ -2.16
ACTN3Q08043 AL121890.5-201ENST00000620848 304 ntBASIC1.55□□□□□ -2.16
ACTN3Q08043 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.55□□□□□ -2.16
ACTN3Q08043 RNU1-62P-201ENST00000362599 164 ntBASIC1.54□□□□□ -2.16
ACTN3Q08043 RNU1-42P-201ENST00000364033 160 ntBASIC1.54□□□□□ -2.16
ACTN3Q08043 RNU4-9P-201ENST00000364951 139 ntBASIC1.54□□□□□ -2.16
ACTN3Q08043 SNORD1A-201ENST00000364968 72 ntBASIC1.54□□□□□ -2.16
ACTN3Q08043 RNU6-483P-201ENST00000384088 108 ntBASIC1.54□□□□□ -2.16
ACTN3Q08043 Y_RNA.530-201ENST00000384587 101 ntBASIC1.54□□□□□ -2.16
ACTN3Q08043 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
ACTN3Q08043 MIR1253-201ENST00000408273 105 ntBASIC1.54□□□□□ -2.16
ACTN3Q08043 RN7SKP101-201ENST00000411376 320 ntBASIC1.54□□□□□ -2.16
ACTN3Q08043 ZNF885P-201ENST00000420174 1098 ntBASIC1.54□□□□□ -2.16
ACTN3Q08043 AC008134.1-201ENST00000420943 193 ntBASIC1.54□□□□□ -2.16
ACTN3Q08043 MTND3P21-201ENST00000433774 331 ntBASIC1.54□□□□□ -2.16
ACTN3Q08043 DAP3P1-201ENST00000441522 278 ntBASIC1.54□□□□□ -2.16
ACTN3Q08043 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1.54□□□□□ -2.16
ACTN3Q08043 RNU1-98P-201ENST00000458992 160 ntBASIC1.54□□□□□ -2.16
ACTN3Q08043 RNU7-57P-201ENST00000459540 60 ntBASIC1.54□□□□□ -2.16
ACTN3Q08043 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.54□□□□□ -2.16
ACTN3Q08043 RNA5SP61-201ENST00000516453 100 ntBASIC1.54□□□□□ -2.16
ACTN3Q08043 AC024995.1-201ENST00000523014 93 ntBASIC1.54□□□□□ -2.16
ACTN3Q08043 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.54□□□□□ -2.16
ACTN3Q08043 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.54□□□□□ -2.16
ACTN3Q08043 SNORD53B-201ENST00000577887 78 ntBASIC1.54□□□□□ -2.16
ACTN3Q08043 AL078596.1-201ENST00000624856 447 ntBASIC1.54□□□□□ -2.16
ACTN3Q08043 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.54□□□□□ -2.16
ACTN3Q08043 MIR302D-201ENST00000362275 68 ntBASIC1.53□□□□□ -2.16
ACTN3Q08043 SNORD115-8-201ENST00000363856 82 ntBASIC1.53□□□□□ -2.16
ACTN3Q08043 SNORD115-38-201ENST00000365037 82 ntBASIC1.53□□□□□ -2.16
ACTN3Q08043 MIR549A-201ENST00000385268 96 ntBASIC1.53□□□□□ -2.16
ACTN3Q08043 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
ACTN3Q08043 RNU6-908P-201ENST00000410160 94 ntBASIC1.53□□□□□ -2.16
ACTN3Q08043 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.53□□□□□ -2.16
ACTN3Q08043 ZNF204P-201ENST00000416749 2397 ntBASIC1.53□□□□□ -2.16
ACTN3Q08043 Z83846.1-201ENST00000446798 265 ntBASIC1.53□□□□□ -2.16
ACTN3Q08043 AC023790.1-201ENST00000482174 347 ntBASIC1.53□□□□□ -2.16
ACTN3Q08043 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.53□□□□□ -2.16
ACTN3Q08043 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.53□□□□□ -2.16
ACTN3Q08043 ZNF519P2-201ENST00000557032 169 ntBASIC1.53□□□□□ -2.16
ACTN3Q08043 MTND5P35-201ENST00000557537 1720 ntBASIC1.53□□□□□ -2.16
ACTN3Q08043 AC008873.1-201ENST00000625051 138 ntBASIC1.53□□□□□ -2.16
ACTN3Q08043 AP000648.3-201ENST00000623539 4507 ntBASIC1.52□□□□□ -2.17
ACTN3Q08043 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.52□□□□□ -2.17
ACTN3Q08043 AL161722.3-201ENST00000605789 2983 ntBASIC1.52□□□□□ -2.17
ACTN3Q08043 Y_RNA.100-201ENST00000363141 102 ntBASIC1.52□□□□□ -2.17
ACTN3Q08043 SNORD115-32-201ENST00000364079 82 ntBASIC1.52□□□□□ -2.17
ACTN3Q08043 RNU6-950P-201ENST00000384651 107 ntBASIC1.52□□□□□ -2.17
ACTN3Q08043 Y_RNA.559-201ENST00000384686 107 ntBASIC1.52□□□□□ -2.17
ACTN3Q08043 MIR548B-201ENST00000385247 97 ntBASIC1.52□□□□□ -2.17
ACTN3Q08043 SNORA67.5-201ENST00000391036 107 ntBASIC1.52□□□□□ -2.17
ACTN3Q08043 AC004866.1-201ENST00000411748 78 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms