Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 Y_RNA.18-201ENST00000362461 102 ntBASIC0.18□□□□□ -2.38
LSM6P62312 Y_RNA.22-201ENST00000362492 102 ntBASIC0.18□□□□□ -2.38
LSM6P62312 RNU5E-10P-201ENST00000363506 118 ntBASIC0.18□□□□□ -2.38
LSM6P62312 Y_RNA.238-201ENST00000364441 102 ntBASIC0.18□□□□□ -2.38
LSM6P62312 RNU6-1335P-201ENST00000365426 107 ntBASIC0.18□□□□□ -2.38
LSM6P62312 RNU6-348P-201ENST00000384386 107 ntBASIC0.18□□□□□ -2.38
LSM6P62312 RNA5SP504-201ENST00000410676 117 ntBASIC0.18□□□□□ -2.38
LSM6P62312 AC009237.7-201ENST00000447357 229 ntBASIC0.18□□□□□ -2.38
LSM6P62312 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC0.18□□□□□ -2.38
LSM6P62312 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC0.18□□□□□ -2.38
LSM6P62312 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC0.18□□□□□ -2.38
LSM6P62312 AC093913.1-201ENST00000614178 329 ntBASIC0.18□□□□□ -2.38
LSM6P62312 SNORA43.4-201ENST00000629559 138 ntBASIC0.18□□□□□ -2.38
LSM6P62312 U6.114-201ENST00000636407 96 ntBASIC0.18□□□□□ -2.38
LSM6P62312 U6.108-201ENST00000637764 58 ntBASIC0.18□□□□□ -2.38
LSM6P62312 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.18□□□□□ -2.38
LSM6P62312 MTND5P17-201ENST00000418405 1603 ntBASIC0.17□□□□□ -2.38
LSM6P62312 RNU6-1240P-201ENST00000365155 104 ntBASIC0.17□□□□□ -2.38
LSM6P62312 RNU6-1327P-201ENST00000365302 105 ntBASIC0.17□□□□□ -2.38
LSM6P62312 SNORD115-7-201ENST00000365306 82 ntBASIC0.17□□□□□ -2.38
LSM6P62312 RNU6-533P-201ENST00000384144 107 ntBASIC0.17□□□□□ -2.38
LSM6P62312 RNU6-342P-201ENST00000384521 104 ntBASIC0.17□□□□□ -2.38
LSM6P62312 MIR216A-201ENST00000385063 110 ntBASIC0.17□□□□□ -2.38
LSM6P62312 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.17□□□□□ -2.38
LSM6P62312 RNU6-57P-201ENST00000411348 103 ntBASIC0.17□□□□□ -2.38
LSM6P62312 AC004386.2-201ENST00000441858 148 ntBASIC0.17□□□□□ -2.38
LSM6P62312 AL031274.1-201ENST00000450334 232 ntBASIC0.17□□□□□ -2.38
LSM6P62312 AC067940.1-201ENST00000458411 300 ntBASIC0.17□□□□□ -2.38
LSM6P62312 AC091874.1-201ENST00000511402 339 ntBASIC0.17□□□□□ -2.38
LSM6P62312 AC025465.4-201ENST00000513422 638 ntBASIC0.17□□□□□ -2.38
LSM6P62312 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.17□□□□□ -2.38
LSM6P62312 RNU6-917P-201ENST00000516294 104 ntBASIC0.17□□□□□ -2.38
LSM6P62312 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.17□□□□□ -2.38
LSM6P62312 AC027419.1-201ENST00000522976 328 ntBASIC0.17□□□□□ -2.38
LSM6P62312 AL391903.3-201ENST00000612158 163 ntBASIC0.17□□□□□ -2.38
LSM6P62312 AC068792.1-201ENST00000621354 417 ntBASIC0.17□□□□□ -2.38
LSM6P62312 7SK.10-201ENST00000621414 298 ntBASIC0.17□□□□□ -2.38
LSM6P62312 AP000568.1-201ENST00000282964 442 ntBASIC0.16□□□□□ -2.38
LSM6P62312 MIRLET7D-201ENST00000362263 87 ntBASIC0.16□□□□□ -2.38
LSM6P62312 RNU6-349P-201ENST00000362402 107 ntBASIC0.16□□□□□ -2.38
LSM6P62312 RNU6-715P-201ENST00000365204 103 ntBASIC0.16□□□□□ -2.38
LSM6P62312 MIR518E-201ENST00000385252 88 ntBASIC0.16□□□□□ -2.38
LSM6P62312 MTCO2P23-201ENST00000425216 680 ntBASIC0.16□□□□□ -2.38
LSM6P62312 RPL23AP50-201ENST00000434149 455 ntBASIC0.16□□□□□ -2.38
LSM6P62312 AL031313.1-201ENST00000448435 256 ntBASIC0.16□□□□□ -2.38
LSM6P62312 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC0.16□□□□□ -2.38
LSM6P62312 RNU7-57P-201ENST00000459540 60 ntBASIC0.16□□□□□ -2.38
LSM6P62312 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.16□□□□□ -2.38
LSM6P62312 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.16□□□□□ -2.38
LSM6P62312 RNU6-1178P-201ENST00000516674 107 ntBASIC0.16□□□□□ -2.38
LSM6P62312 AP003168.1-201ENST00000530091 307 ntBASIC0.16□□□□□ -2.38
LSM6P62312 AC004223.2-201ENST00000590309 544 ntBASIC0.16□□□□□ -2.38
LSM6P62312 AC004832.4-201ENST00000608952 331 ntBASIC0.16□□□□□ -2.38
LSM6P62312 RNU6-1287P-201ENST00000362914 107 ntBASIC0.15□□□□□ -2.39
LSM6P62312 RNU6-1305P-201ENST00000364353 104 ntBASIC0.15□□□□□ -2.39
LSM6P62312 RNU6-1060P-201ENST00000384664 107 ntBASIC0.15□□□□□ -2.39
LSM6P62312 MTCO2P21-201ENST00000419780 677 ntBASIC0.15□□□□□ -2.39
LSM6P62312 AL445305.1-201ENST00000432577 575 ntBASIC0.15□□□□□ -2.39
LSM6P62312 AC093019.1-201ENST00000443135 252 ntBASIC0.15□□□□□ -2.39
LSM6P62312 RPS20P10-201ENST00000451209 253 ntBASIC0.15□□□□□ -2.39
LSM6P62312 AC022868.1-201ENST00000517767 391 ntBASIC0.15□□□□□ -2.39
LSM6P62312 AC103996.1-201ENST00000555468 102 ntBASIC0.15□□□□□ -2.39
LSM6P62312 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.15□□□□□ -2.39
LSM6P62312 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC0.15□□□□□ -2.39
LSM6P62312 snoZ196.1-201ENST00000625269 89 ntBASIC0.15□□□□□ -2.39
LSM6P62312 RNU6-827P-201ENST00000365553 106 ntBASIC0.14□□□□□ -2.39
LSM6P62312 SNORA36.2-201ENST00000384004 127 ntBASIC0.14□□□□□ -2.39
LSM6P62312 SNORA12.1-201ENST00000390873 148 ntBASIC0.14□□□□□ -2.39
LSM6P62312 RNU6-550P-201ENST00000391057 101 ntBASIC0.14□□□□□ -2.39
LSM6P62312 RNU6-1000P-201ENST00000391066 106 ntBASIC0.14□□□□□ -2.39
LSM6P62312 RPS26P42-201ENST00000413485 326 ntBASIC0.14□□□□□ -2.39
LSM6P62312 AC106883.1-201ENST00000418805 562 ntBASIC0.14□□□□□ -2.39
LSM6P62312 MTND1P20-201ENST00000430341 950 ntBASIC0.14□□□□□ -2.39
LSM6P62312 MTATP6P16-201ENST00000434543 526 ntBASIC0.14□□□□□ -2.39
LSM6P62312 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.14□□□□□ -2.39
LSM6P62312 TPT1P7-201ENST00000458300 517 ntBASIC0.14□□□□□ -2.39
LSM6P62312 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.14□□□□□ -2.39
LSM6P62312 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC0.14□□□□□ -2.39
LSM6P62312 RNA5SP436-201ENST00000516020 115 ntBASIC0.14□□□□□ -2.39
LSM6P62312 AC025647.1-201ENST00000517879 253 ntBASIC0.14□□□□□ -2.39
LSM6P62312 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.14□□□□□ -2.39
LSM6P62312 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.14□□□□□ -2.39
LSM6P62312 AC234772.3-201ENST00000602277 528 ntBASIC0.14□□□□□ -2.39
LSM6P62312 RNA5SP222-201ENST00000411039 105 ntBASIC0.13□□□□□ -2.39
LSM6P62312 AC244098.3-201ENST00000424803 96 ntBASIC0.13□□□□□ -2.39
LSM6P62312 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC0.13□□□□□ -2.39
LSM6P62312 OR9P1P-201ENST00000496431 281 ntBASIC0.13□□□□□ -2.39
LSM6P62312 SNORA68.3-201ENST00000515906 83 ntBASIC0.13□□□□□ -2.39
LSM6P62312 AC011195.1-201ENST00000578177 177 ntBASIC0.13□□□□□ -2.39
LSM6P62312 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC0.13□□□□□ -2.39
LSM6P62312 AC131055.1-201ENST00000584626 316 ntBASIC0.13□□□□□ -2.39
LSM6P62312 AC017083.3-201ENST00000609955 700 ntBASIC0.13□□□□□ -2.39
LSM6P62312 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.12□□□□□ -2.39
LSM6P62312 RNA5SP511-201ENST00000410487 115 ntBASIC0.12□□□□□ -2.39
LSM6P62312 Y_RNA.608-201ENST00000410647 95 ntBASIC0.12□□□□□ -2.39
LSM6P62312 AC016909.1-201ENST00000415916 166 ntBASIC0.12□□□□□ -2.39
LSM6P62312 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.12□□□□□ -2.39
LSM6P62312 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.12□□□□□ -2.39
LSM6P62312 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.12□□□□□ -2.39
LSM6P62312 MTCO1P19-201ENST00000443487 500 ntBASIC0.12□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms