Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.59□□□□□ -2.15
SRP54P61011 AC109635.3-201ENST00000529536 185 ntBASIC1.59□□□□□ -2.15
SRP54P61011 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.59□□□□□ -2.15
SRP54P61011 SNORD53B-201ENST00000577887 78 ntBASIC1.59□□□□□ -2.15
SRP54P61011 MIR3976-201ENST00000606807 139 ntBASIC1.59□□□□□ -2.15
SRP54P61011 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.59□□□□□ -2.15
SRP54P61011 SCARNA4-201ENST00000629045 128 ntBASIC1.59□□□□□ -2.15
SRP54P61011 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.59□□□□□ -2.16
SRP54P61011 AC010615.1-201ENST00000594254 1764 ntBASIC1.59□□□□□ -2.16
SRP54P61011 BX322639.1-202ENST00000423987 2213 ntBASIC1.59□□□□□ -2.16
SRP54P61011 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
SRP54P61011 Y_RNA.41-201ENST00000362646 102 ntBASIC1.58□□□□□ -2.16
SRP54P61011 RNU6-414P-201ENST00000363705 104 ntBASIC1.58□□□□□ -2.16
SRP54P61011 RNU1-96P-201ENST00000364163 162 ntBASIC1.58□□□□□ -2.16
SRP54P61011 SNORD48-201ENST00000364953 64 ntBASIC1.58□□□□□ -2.16
SRP54P61011 RNU6-975P-201ENST00000384296 105 ntBASIC1.58□□□□□ -2.16
SRP54P61011 AL117342.1-201ENST00000404861 406 ntBASIC1.58□□□□□ -2.16
SRP54P61011 RN7SKP51-201ENST00000410781 304 ntBASIC1.58□□□□□ -2.16
SRP54P61011 BTF3P4-201ENST00000418852 495 ntBASIC1.58□□□□□ -2.16
SRP54P61011 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.58□□□□□ -2.16
SRP54P61011 CST2P1-201ENST00000425770 87 ntBASIC1.58□□□□□ -2.16
SRP54P61011 C8orf59P1-201ENST00000429930 303 ntBASIC1.58□□□□□ -2.16
SRP54P61011 AC245047.4-201ENST00000433189 144 ntBASIC1.58□□□□□ -2.16
SRP54P61011 AC069257.2-201ENST00000441819 155 ntBASIC1.58□□□□□ -2.16
SRP54P61011 AL353572.1-201ENST00000442490 417 ntBASIC1.58□□□□□ -2.16
SRP54P61011 AC074290.1-201ENST00000448883 135 ntBASIC1.58□□□□□ -2.16
SRP54P61011 MTCO3P8-201ENST00000453691 755 ntBASIC1.58□□□□□ -2.16
SRP54P61011 RNU7-66P-201ENST00000459469 62 ntBASIC1.58□□□□□ -2.16
SRP54P61011 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.58□□□□□ -2.16
SRP54P61011 RPL23AP75-201ENST00000491601 451 ntBASIC1.58□□□□□ -2.16
SRP54P61011 AC011406.1-201ENST00000512440 370 ntBASIC1.58□□□□□ -2.16
SRP54P61011 RNU6-1041P-201ENST00000516254 102 ntBASIC1.58□□□□□ -2.16
SRP54P61011 RNU6-314P-201ENST00000516574 104 ntBASIC1.58□□□□□ -2.16
SRP54P61011 RRN3P3-201ENST00000549207 578 ntBASIC1.58□□□□□ -2.16
SRP54P61011 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.58□□□□□ -2.16
SRP54P61011 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.58□□□□□ -2.16
SRP54P61011 AC016727.1-205ENST00000605437 569 ntBASIC1.58□□□□□ -2.16
SRP54P61011 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.58□□□□□ -2.16
SRP54P61011 AL138726.1-201ENST00000614873 333 ntBASIC1.58□□□□□ -2.16
SRP54P61011 AC068205.3-201ENST00000636385 468 ntBASIC1.58□□□□□ -2.16
SRP54P61011 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
SRP54P61011 Y_RNA.38-201ENST00000362617 102 ntBASIC1.57□□□□□ -2.16
SRP54P61011 RNU4-75P-201ENST00000364621 146 ntBASIC1.57□□□□□ -2.16
SRP54P61011 RNU6-790P-201ENST00000384479 105 ntBASIC1.57□□□□□ -2.16
SRP54P61011 RNU6-95P-201ENST00000384697 107 ntBASIC1.57□□□□□ -2.16
SRP54P61011 MIR586-201ENST00000385035 97 ntBASIC1.57□□□□□ -2.16
SRP54P61011 RN7SKP101-201ENST00000411376 320 ntBASIC1.57□□□□□ -2.16
SRP54P61011 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.57□□□□□ -2.16
SRP54P61011 AC060773.1-201ENST00000421698 310 ntBASIC1.57□□□□□ -2.16
SRP54P61011 FTH1P12-201ENST00000432137 551 ntBASIC1.57□□□□□ -2.16
SRP54P61011 MTCO3P18-201ENST00000440206 761 ntBASIC1.57□□□□□ -2.16
SRP54P61011 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.57□□□□□ -2.16
SRP54P61011 PCMTD1P1-201ENST00000455560 355 ntBASIC1.57□□□□□ -2.16
SRP54P61011 HMGN2P9-201ENST00000476875 229 ntBASIC1.57□□□□□ -2.16
SRP54P61011 RNA5SP481-201ENST00000516814 122 ntBASIC1.57□□□□□ -2.16
SRP54P61011 AC023043.2-201ENST00000589678 1026 ntBASIC1.57□□□□□ -2.16
SRP54P61011 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
SRP54P61011 SNORD50.1-201ENST00000362987 71 ntBASIC1.56□□□□□ -2.16
SRP54P61011 RNU6-623P-201ENST00000363143 105 ntBASIC1.56□□□□□ -2.16
SRP54P61011 Y_RNA.135-201ENST00000363439 95 ntBASIC1.56□□□□□ -2.16
SRP54P61011 SNORA63D-201ENST00000364359 132 ntBASIC1.56□□□□□ -2.16
SRP54P61011 RNU6-360P-201ENST00000390944 104 ntBASIC1.56□□□□□ -2.16
SRP54P61011 MIR1267-201ENST00000408723 78 ntBASIC1.56□□□□□ -2.16
SRP54P61011 RNU6-373P-201ENST00000411247 98 ntBASIC1.56□□□□□ -2.16
SRP54P61011 AC004866.1-201ENST00000411748 78 ntBASIC1.56□□□□□ -2.16
SRP54P61011 RPL23AP36-201ENST00000413895 458 ntBASIC1.56□□□□□ -2.16
SRP54P61011 DLGAP5P1-201ENST00000430307 464 ntBASIC1.56□□□□□ -2.16
SRP54P61011 AC079354.2-201ENST00000453523 154 ntBASIC1.56□□□□□ -2.16
SRP54P61011 snoU13.9-201ENST00000458927 103 ntBASIC1.56□□□□□ -2.16
SRP54P61011 RPL26P26-201ENST00000480251 434 ntBASIC1.56□□□□□ -2.16
SRP54P61011 RPL36AP21-201ENST00000490372 323 ntBASIC1.56□□□□□ -2.16
SRP54P61011 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.56□□□□□ -2.16
SRP54P61011 AC108729.3-201ENST00000513484 108 ntBASIC1.56□□□□□ -2.16
SRP54P61011 RNA5SP384-201ENST00000516615 116 ntBASIC1.56□□□□□ -2.16
SRP54P61011 RNU6-256P-201ENST00000516747 97 ntBASIC1.56□□□□□ -2.16
SRP54P61011 RNA5SP54-201ENST00000516951 92 ntBASIC1.56□□□□□ -2.16
SRP54P61011 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.56□□□□□ -2.16
SRP54P61011 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.56□□□□□ -2.16
SRP54P61011 MIR4498-201ENST00000577599 66 ntBASIC1.56□□□□□ -2.16
SRP54P61011 AF250324.2-201ENST00000608299 610 ntBASIC1.56□□□□□ -2.16
SRP54P61011 AC008873.1-201ENST00000625051 138 ntBASIC1.56□□□□□ -2.16
SRP54P61011 Y_RNA.151-201ENST00000363566 112 ntBASIC1.55□□□□□ -2.16
SRP54P61011 SNORD115-8-201ENST00000363856 82 ntBASIC1.55□□□□□ -2.16
SRP54P61011 RNU1-42P-201ENST00000364033 160 ntBASIC1.55□□□□□ -2.16
SRP54P61011 SNORD115-32-201ENST00000364079 82 ntBASIC1.55□□□□□ -2.16
SRP54P61011 RNU6-60P-201ENST00000364792 103 ntBASIC1.55□□□□□ -2.16
SRP54P61011 RNU4-9P-201ENST00000364951 139 ntBASIC1.55□□□□□ -2.16
SRP54P61011 SNORD115-38-201ENST00000365037 82 ntBASIC1.55□□□□□ -2.16
SRP54P61011 Y_RNA.402-201ENST00000383972 102 ntBASIC1.55□□□□□ -2.16
SRP54P61011 FGF7P8-201ENST00000402994 292 ntBASIC1.55□□□□□ -2.16
SRP54P61011 RNU2-7P-201ENST00000410794 178 ntBASIC1.55□□□□□ -2.16
SRP54P61011 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.55□□□□□ -2.16
SRP54P61011 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.55□□□□□ -2.16
SRP54P61011 AP1B1P2-201ENST00000416196 106 ntBASIC1.55□□□□□ -2.16
SRP54P61011 AL513185.2-201ENST00000425543 193 ntBASIC1.55□□□□□ -2.16
SRP54P61011 MTCO3P29-201ENST00000432119 779 ntBASIC1.55□□□□□ -2.16
SRP54P61011 HSPE1P9-201ENST00000440046 311 ntBASIC1.55□□□□□ -2.16
SRP54P61011 MTCO2P7-201ENST00000446518 666 ntBASIC1.55□□□□□ -2.16
SRP54P61011 snoU13.30-201ENST00000458951 104 ntBASIC1.55□□□□□ -2.16
SRP54P61011 AC005908.1-201ENST00000468701 347 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 147.7 ms