Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.79□□□□□ -1.8
USP11P51784 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
USP11P51784 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
USP11P51784 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
USP11P51784 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.78□□□□□ -1.8
USP11P51784 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
USP11P51784 MIR30E-201ENST00000362104 92 ntBASIC3.78□□□□□ -1.8
USP11P51784 MIR539-201ENST00000365690 78 ntBASIC3.78□□□□□ -1.8
USP11P51784 SNORA72.4-201ENST00000384174 132 ntBASIC3.78□□□□□ -1.8
USP11P51784 RNU6-80P-201ENST00000384195 107 ntBASIC3.78□□□□□ -1.8
USP11P51784 SNORA8.3-201ENST00000384679 139 ntBASIC3.78□□□□□ -1.8
USP11P51784 AL031003.1-201ENST00000404229 172 ntBASIC3.78□□□□□ -1.8
USP11P51784 RNU2-52P-201ENST00000410680 190 ntBASIC3.78□□□□□ -1.8
USP11P51784 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.78□□□□□ -1.8
USP11P51784 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC3.78□□□□□ -1.8
USP11P51784 AC010401.1-201ENST00000463867 348 ntBASIC3.78□□□□□ -1.8
USP11P51784 RPL31P41-201ENST00000477967 372 ntBASIC3.78□□□□□ -1.8
USP11P51784 RPL32P34-201ENST00000486380 400 ntBASIC3.78□□□□□ -1.8
USP11P51784 AIG1P1-201ENST00000503376 148 ntBASIC3.78□□□□□ -1.8
USP11P51784 RNU6-107P-201ENST00000516643 102 ntBASIC3.78□□□□□ -1.8
USP11P51784 MIR2276-201ENST00000516886 89 ntBASIC3.78□□□□□ -1.8
USP11P51784 MIR3200-201ENST00000580767 85 ntBASIC3.78□□□□□ -1.8
USP11P51784 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.78□□□□□ -1.8
USP11P51784 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.78□□□□□ -1.8
USP11P51784 PWAR6-201ENST00000552334 4618 ntBASIC3.77□□□□□ -1.81
USP11P51784 SNORD87-201ENST00000364849 89 ntBASIC3.77□□□□□ -1.81
USP11P51784 Y_RNA.287-201ENST00000364853 94 ntBASIC3.77□□□□□ -1.81
USP11P51784 Y_RNA.293-201ENST00000364908 93 ntBASIC3.77□□□□□ -1.81
USP11P51784 RNU6-376P-201ENST00000384731 106 ntBASIC3.77□□□□□ -1.81
USP11P51784 AP000567.1-201ENST00000406413 156 ntBASIC3.77□□□□□ -1.81
USP11P51784 RNA5SP504-201ENST00000410676 117 ntBASIC3.77□□□□□ -1.81
USP11P51784 AC005300.1-201ENST00000428401 373 ntBASIC3.77□□□□□ -1.81
USP11P51784 RNU4-57P-201ENST00000515980 135 ntBASIC3.77□□□□□ -1.81
USP11P51784 NACAP3-201ENST00000552100 481 ntBASIC3.77□□□□□ -1.81
USP11P51784 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.77□□□□□ -1.81
USP11P51784 SNRPGP20-201ENST00000604477 205 ntBASIC3.77□□□□□ -1.81
USP11P51784 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.77□□□□□ -1.81
USP11P51784 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.77□□□□□ -1.81
USP11P51784 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.77□□□□□ -1.81
USP11P51784 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
USP11P51784 RNY1P11-201ENST00000363759 113 ntBASIC3.76□□□□□ -1.81
USP11P51784 Y_RNA.337-201ENST00000365312 102 ntBASIC3.76□□□□□ -1.81
USP11P51784 RNVU1-14-201ENST00000384770 164 ntBASIC3.76□□□□□ -1.81
USP11P51784 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.76□□□□□ -1.81
USP11P51784 AC005326.1-201ENST00000429197 123 ntBASIC3.76□□□□□ -1.81
USP11P51784 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.76□□□□□ -1.81
USP11P51784 RPL23AP58-201ENST00000440453 469 ntBASIC3.76□□□□□ -1.81
USP11P51784 AC092991.1-201ENST00000477176 376 ntBASIC3.76□□□□□ -1.81
USP11P51784 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.76□□□□□ -1.81
USP11P51784 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC3.76□□□□□ -1.81
USP11P51784 RNU6-659P-201ENST00000516454 104 ntBASIC3.76□□□□□ -1.81
USP11P51784 AC115990.1-201ENST00000526957 301 ntBASIC3.76□□□□□ -1.81
USP11P51784 AC011471.1-201ENST00000585766 187 ntBASIC3.76□□□□□ -1.81
USP11P51784 uc_338.1-201ENST00000612113 180 ntBASIC3.76□□□□□ -1.81
USP11P51784 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.76□□□□□ -1.81
USP11P51784 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.76□□□□□ -1.81
USP11P51784 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
USP11P51784 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
USP11P51784 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.75□□□□□ -1.81
USP11P51784 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
USP11P51784 RNU6-199P-201ENST00000362954 107 ntBASIC3.75□□□□□ -1.81
USP11P51784 RNU6-529P-201ENST00000363383 104 ntBASIC3.75□□□□□ -1.81
USP11P51784 Y_RNA.243-201ENST00000364481 109 ntBASIC3.75□□□□□ -1.81
USP11P51784 RNU6-969P-201ENST00000383900 105 ntBASIC3.75□□□□□ -1.81
USP11P51784 MIR616-201ENST00000385293 97 ntBASIC3.75□□□□□ -1.81
USP11P51784 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
USP11P51784 SNORA48.8-201ENST00000391324 134 ntBASIC3.75□□□□□ -1.81
USP11P51784 AL355497.1-201ENST00000406262 551 ntBASIC3.75□□□□□ -1.81
USP11P51784 RNA5SP120-201ENST00000410900 112 ntBASIC3.75□□□□□ -1.81
USP11P51784 AC006461.1-201ENST00000412637 326 ntBASIC3.75□□□□□ -1.81
USP11P51784 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.75□□□□□ -1.81
USP11P51784 AC012308.1-201ENST00000451232 178 ntBASIC3.75□□□□□ -1.81
USP11P51784 AC006539.3-201ENST00000454258 129 ntBASIC3.75□□□□□ -1.81
USP11P51784 AC245047.8-201ENST00000456455 284 ntBASIC3.75□□□□□ -1.81
USP11P51784 RN7SL601P-201ENST00000471221 293 ntBASIC3.75□□□□□ -1.81
USP11P51784 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC3.75□□□□□ -1.81
USP11P51784 RNU6-561P-201ENST00000516222 102 ntBASIC3.75□□□□□ -1.81
USP11P51784 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.75□□□□□ -1.81
USP11P51784 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.75□□□□□ -1.81
USP11P51784 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC3.75□□□□□ -1.81
USP11P51784 MIR3923-201ENST00000579521 83 ntBASIC3.75□□□□□ -1.81
USP11P51784 LARP7P3-201ENST00000579888 337 ntBASIC3.75□□□□□ -1.81
USP11P51784 MIR3136-201ENST00000583498 78 ntBASIC3.75□□□□□ -1.81
USP11P51784 MIR5195-201ENST00000583555 115 ntBASIC3.75□□□□□ -1.81
USP11P51784 AC012640.5-201ENST00000623897 319 ntBASIC3.75□□□□□ -1.81
USP11P51784 AC018692.3-201ENST00000623929 123 ntBASIC3.75□□□□□ -1.81
USP11P51784 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.75□□□□□ -1.81
USP11P51784 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.75□□□□□ -1.81
USP11P51784 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
USP11P51784 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
USP11P51784 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
USP11P51784 AC002543.1-201ENST00000299783 1954 ntBASIC3.74□□□□□ -1.81
USP11P51784 ZNF702P-202ENST00000434269 1966 ntBASIC3.74□□□□□ -1.81
USP11P51784 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.74□□□□□ -1.81
USP11P51784 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.74□□□□□ -1.81
USP11P51784 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.74□□□□□ -1.81
USP11P51784 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
USP11P51784 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.74□□□□□ -1.81
USP11P51784 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
USP11P51784 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms