Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 RNU1-117P-201ENST00000517041 158 ntBASIC2.44□□□□□ -2.02
SOX2P48431 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.44□□□□□ -2.02
SOX2P48431 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC2.44□□□□□ -2.02
SOX2P48431 AC018630.3-201ENST00000542637 96 ntBASIC2.44□□□□□ -2.02
SOX2P48431 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.44□□□□□ -2.02
SOX2P48431 AK6P2-201ENST00000549020 471 ntBASIC2.44□□□□□ -2.02
SOX2P48431 AC005176.2-201ENST00000596933 147 ntBASIC2.44□□□□□ -2.02
SOX2P48431 AL356280.1-201ENST00000603614 379 ntBASIC2.44□□□□□ -2.02
SOX2P48431 AC084757.4-201ENST00000616350 526 ntBASIC2.44□□□□□ -2.02
SOX2P48431 AC068205.3-201ENST00000636385 468 ntBASIC2.44□□□□□ -2.02
SOX2P48431 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.44□□□□□ -2.02
SOX2P48431 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.44□□□□□ -2.02
SOX2P48431 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
SOX2P48431 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.44□□□□□ -2.02
SOX2P48431 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.43□□□□□ -2.02
SOX2P48431 SNORD113-8-201ENST00000363497 74 ntBASIC2.43□□□□□ -2.02
SOX2P48431 RNU6-525P-201ENST00000363685 104 ntBASIC2.43□□□□□ -2.02
SOX2P48431 RNA5SP267-201ENST00000364893 126 ntBASIC2.43□□□□□ -2.02
SOX2P48431 Y_RNA.415-201ENST00000384012 112 ntBASIC2.43□□□□□ -2.02
SOX2P48431 Y_RNA.483-201ENST00000384380 101 ntBASIC2.43□□□□□ -2.02
SOX2P48431 RNVU1-14-201ENST00000384770 164 ntBASIC2.43□□□□□ -2.02
SOX2P48431 MT-TW-201ENST00000387382 68 ntBASIC2.43□□□□□ -2.02
SOX2P48431 RNU2-63P-201ENST00000410792 194 ntBASIC2.43□□□□□ -2.02
SOX2P48431 ELOCP21-201ENST00000412558 336 ntBASIC2.43□□□□□ -2.02
SOX2P48431 AL390729.2-201ENST00000416137 156 ntBASIC2.43□□□□□ -2.02
SOX2P48431 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.43□□□□□ -2.02
SOX2P48431 Z82209.1-201ENST00000422141 2135 ntBASIC2.43□□□□□ -2.02
SOX2P48431 AC092427.1-202ENST00000430569 476 ntBASIC2.43□□□□□ -2.02
SOX2P48431 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.43□□□□□ -2.02
SOX2P48431 MIR5004-201ENST00000579078 107 ntBASIC2.43□□□□□ -2.02
SOX2P48431 MIR3671-201ENST00000580455 88 ntBASIC2.43□□□□□ -2.02
SOX2P48431 MIR4444-1-201ENST00000581696 74 ntBASIC2.43□□□□□ -2.02
SOX2P48431 MIR4444-2-201ENST00000584390 74 ntBASIC2.43□□□□□ -2.02
SOX2P48431 AC011373.1-201ENST00000607270 237 ntBASIC2.43□□□□□ -2.02
SOX2P48431 AC062037.2-201ENST00000610137 73 ntBASIC2.43□□□□□ -2.02
SOX2P48431 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.43□□□□□ -2.02
SOX2P48431 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
SOX2P48431 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
SOX2P48431 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
SOX2P48431 MIR26A1-201ENST00000362205 77 ntBASIC2.42□□□□□ -2.02
SOX2P48431 Y_RNA.84-201ENST00000363011 104 ntBASIC2.42□□□□□ -2.02
SOX2P48431 snoU2_19.2-201ENST00000363024 80 ntBASIC2.42□□□□□ -2.02
SOX2P48431 SNORD46.1-201ENST00000364139 104 ntBASIC2.42□□□□□ -2.02
SOX2P48431 SNORA72.2-201ENST00000365028 127 ntBASIC2.42□□□□□ -2.02
SOX2P48431 RNU6-1310P-201ENST00000384153 107 ntBASIC2.42□□□□□ -2.02
SOX2P48431 RNU6-220P-201ENST00000390919 107 ntBASIC2.42□□□□□ -2.02
SOX2P48431 Y_RNA.602-201ENST00000410535 92 ntBASIC2.42□□□□□ -2.02
SOX2P48431 RAB28P5-201ENST00000427490 651 ntBASIC2.42□□□□□ -2.02
SOX2P48431 ARL5AP4-201ENST00000430731 512 ntBASIC2.42□□□□□ -2.02
SOX2P48431 RPL23AP83-201ENST00000434984 473 ntBASIC2.42□□□□□ -2.02
SOX2P48431 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.42□□□□□ -2.02
SOX2P48431 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.42□□□□□ -2.02
SOX2P48431 EEF1B2P7-201ENST00000451177 676 ntBASIC2.42□□□□□ -2.02
SOX2P48431 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.42□□□□□ -2.02
SOX2P48431 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.42□□□□□ -2.02
SOX2P48431 MIR449C-201ENST00000516047 92 ntBASIC2.42□□□□□ -2.02
SOX2P48431 RNU6-107P-201ENST00000516643 102 ntBASIC2.42□□□□□ -2.02
SOX2P48431 RNU6-1098P-201ENST00000516772 96 ntBASIC2.42□□□□□ -2.02
SOX2P48431 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.42□□□□□ -2.02
SOX2P48431 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.42□□□□□ -2.02
SOX2P48431 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.42□□□□□ -2.02
SOX2P48431 MIR4423-201ENST00000580922 80 ntBASIC2.42□□□□□ -2.02
SOX2P48431 MIR3117-201ENST00000584034 78 ntBASIC2.42□□□□□ -2.02
SOX2P48431 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
SOX2P48431 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.42□□□□□ -2.02
SOX2P48431 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.42□□□□□ -2.02
SOX2P48431 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
SOX2P48431 Y_RNA.188-201ENST00000363952 111 ntBASIC2.41□□□□□ -2.02
SOX2P48431 RNA5SP72-201ENST00000364442 117 ntBASIC2.41□□□□□ -2.02
SOX2P48431 SNORD87-201ENST00000364849 89 ntBASIC2.41□□□□□ -2.02
SOX2P48431 RNU6-234P-201ENST00000365229 104 ntBASIC2.41□□□□□ -2.02
SOX2P48431 RNU6-546P-201ENST00000383991 107 ntBASIC2.41□□□□□ -2.02
SOX2P48431 RNU6-1026P-201ENST00000384465 108 ntBASIC2.41□□□□□ -2.02
SOX2P48431 RNU6-21P-201ENST00000384710 107 ntBASIC2.41□□□□□ -2.02
SOX2P48431 Y_RNA.570-201ENST00000384750 101 ntBASIC2.41□□□□□ -2.02
SOX2P48431 MIR215-201ENST00000384858 110 ntBASIC2.41□□□□□ -2.02
SOX2P48431 MIR95-201ENST00000385072 81 ntBASIC2.41□□□□□ -2.02
SOX2P48431 Y_RNA.581-201ENST00000391017 97 ntBASIC2.41□□□□□ -2.02
SOX2P48431 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
SOX2P48431 RNU6-1203P-201ENST00000410703 110 ntBASIC2.41□□□□□ -2.02
SOX2P48431 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.41□□□□□ -2.02
SOX2P48431 RNU7-14P-201ENST00000459331 62 ntBASIC2.41□□□□□ -2.02
SOX2P48431 snoU13.22-201ENST00000459428 104 ntBASIC2.41□□□□□ -2.02
SOX2P48431 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.41□□□□□ -2.02
SOX2P48431 SEPT14P8-201ENST00000508026 178 ntBASIC2.41□□□□□ -2.02
SOX2P48431 SNORA74D-201ENST00000516404 141 ntBASIC2.41□□□□□ -2.02
SOX2P48431 RNU7-110P-201ENST00000516891 62 ntBASIC2.41□□□□□ -2.02
SOX2P48431 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
SOX2P48431 AC110588.1-201ENST00000559699 137 ntBASIC2.41□□□□□ -2.02
SOX2P48431 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.41□□□□□ -2.02
SOX2P48431 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.41□□□□□ -2.02
SOX2P48431 SNORD113-5-201ENST00000607261 78 ntBASIC2.41□□□□□ -2.02
SOX2P48431 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
SOX2P48431 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
SOX2P48431 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.41□□□□□ -2.02
SOX2P48431 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.41□□□□□ -2.02
SOX2P48431 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.41□□□□□ -2.02
SOX2P48431 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.41□□□□□ -2.02
SOX2P48431 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.02
SOX2P48431 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms