Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 RN7SKP202-201ENST00000410439 330 ntBASIC3.79□□□□□ -1.8
CHRNA4P43681 SNORA19.1-201ENST00000410656 129 ntBASIC3.79□□□□□ -1.8
CHRNA4P43681 RPL23AP62-201ENST00000463396 453 ntBASIC3.79□□□□□ -1.8
CHRNA4P43681 AP000873.1-201ENST00000463987 400 ntBASIC3.79□□□□□ -1.8
CHRNA4P43681 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.79□□□□□ -1.8
CHRNA4P43681 RN7SL132P-201ENST00000478131 296 ntBASIC3.79□□□□□ -1.8
CHRNA4P43681 SNORA31.20-201ENST00000517111 133 ntBASIC3.79□□□□□ -1.8
CHRNA4P43681 CYCSP30-201ENST00000546447 172 ntBASIC3.79□□□□□ -1.8
CHRNA4P43681 HSPE1P5-201ENST00000561489 272 ntBASIC3.79□□□□□ -1.8
CHRNA4P43681 MIR3923-201ENST00000579521 83 ntBASIC3.79□□□□□ -1.8
CHRNA4P43681 FAM71BP1-201ENST00000604431 523 ntBASIC3.79□□□□□ -1.8
CHRNA4P43681 TCL6_2.1-201ENST00000615162 119 ntBASIC3.79□□□□□ -1.8
CHRNA4P43681 AC005562.2-201ENST00000618264 111 ntBASIC3.79□□□□□ -1.8
CHRNA4P43681 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.79□□□□□ -1.8
CHRNA4P43681 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.79□□□□□ -1.8
CHRNA4P43681 AC004925.1-201ENST00000624256 2706 ntBASIC3.79□□□□□ -1.8
CHRNA4P43681 AL159152.1-201ENST00000635019 2587 ntBASIC3.79□□□□□ -1.8
CHRNA4P43681 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CHRNA4P43681 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CHRNA4P43681 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CHRNA4P43681 MFSD8-236ENST00000641509 4050 ntBASIC3.79□□□□□ -1.8
CHRNA4P43681 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CHRNA4P43681 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CHRNA4P43681 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CHRNA4P43681 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
CHRNA4P43681 RNU6-629P-201ENST00000384061 103 ntBASIC3.78□□□□□ -1.8
CHRNA4P43681 SNORD116-13-201ENST00000384408 92 ntBASIC3.78□□□□□ -1.8
CHRNA4P43681 MIR670-201ENST00000390142 98 ntBASIC3.78□□□□□ -1.8
CHRNA4P43681 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CHRNA4P43681 SNORA11.1-201ENST00000408133 129 ntBASIC3.78□□□□□ -1.8
CHRNA4P43681 AC099548.1-201ENST00000421443 426 ntBASIC3.78□□□□□ -1.8
CHRNA4P43681 NDUFB1P1-201ENST00000435191 180 ntBASIC3.78□□□□□ -1.8
CHRNA4P43681 RPL36AP21-201ENST00000490372 323 ntBASIC3.78□□□□□ -1.8
CHRNA4P43681 RPL23AP54-201ENST00000495129 419 ntBASIC3.78□□□□□ -1.8
CHRNA4P43681 RNA5SP236-201ENST00000516169 116 ntBASIC3.78□□□□□ -1.8
CHRNA4P43681 SNORA70.16-201ENST00000516390 95 ntBASIC3.78□□□□□ -1.8
CHRNA4P43681 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.78□□□□□ -1.8
CHRNA4P43681 AC008011.1-201ENST00000545989 227 ntBASIC3.78□□□□□ -1.8
CHRNA4P43681 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.78□□□□□ -1.8
CHRNA4P43681 MIR5009-201ENST00000578736 100 ntBASIC3.78□□□□□ -1.8
CHRNA4P43681 MIR4644-201ENST00000579929 84 ntBASIC3.78□□□□□ -1.8
CHRNA4P43681 AC006130.2-201ENST00000586202 326 ntBASIC3.78□□□□□ -1.8
CHRNA4P43681 AL365205.2-201ENST00000594586 68 ntBASIC3.78□□□□□ -1.8
CHRNA4P43681 AC093732.2-201ENST00000607950 274 ntBASIC3.78□□□□□ -1.8
CHRNA4P43681 FTX_3.1-201ENST00000610451 147 ntBASIC3.78□□□□□ -1.8
CHRNA4P43681 AC006133.1-201ENST00000617106 264 ntBASIC3.78□□□□□ -1.8
CHRNA4P43681 MIR6075-201ENST00000620782 95 ntBASIC3.78□□□□□ -1.8
CHRNA4P43681 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CHRNA4P43681 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
CHRNA4P43681 AC002543.1-201ENST00000299783 1954 ntBASIC3.78□□□□□ -1.8
CHRNA4P43681 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
CHRNA4P43681 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CHRNA4P43681 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CHRNA4P43681 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CHRNA4P43681 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CHRNA4P43681 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
CHRNA4P43681 MIR302B-201ENST00000362188 73 ntBASIC3.77□□□□□ -1.81
CHRNA4P43681 RNU1-18P-201ENST00000363062 164 ntBASIC3.77□□□□□ -1.81
CHRNA4P43681 Y_RNA.124-201ENST00000363339 93 ntBASIC3.77□□□□□ -1.81
CHRNA4P43681 RNU6-335P-201ENST00000364563 113 ntBASIC3.77□□□□□ -1.81
CHRNA4P43681 MIR554-201ENST00000384874 96 ntBASIC3.77□□□□□ -1.81
CHRNA4P43681 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
CHRNA4P43681 RNU6-279P-201ENST00000391297 101 ntBASIC3.77□□□□□ -1.81
CHRNA4P43681 EI24P2-201ENST00000397776 1076 ntBASIC3.77□□□□□ -1.81
CHRNA4P43681 RNA5SP201-201ENST00000410316 124 ntBASIC3.77□□□□□ -1.81
CHRNA4P43681 CYCSP48-201ENST00000417124 323 ntBASIC3.77□□□□□ -1.81
CHRNA4P43681 AC008134.1-201ENST00000420943 193 ntBASIC3.77□□□□□ -1.81
CHRNA4P43681 HMGN2P30-201ENST00000423237 256 ntBASIC3.77□□□□□ -1.81
CHRNA4P43681 AC002075.2-201ENST00000425207 252 ntBASIC3.77□□□□□ -1.81
CHRNA4P43681 AL591419.1-201ENST00000427423 339 ntBASIC3.77□□□□□ -1.81
CHRNA4P43681 RPL23AP82-202ENST00000427528 469 ntBASIC3.77□□□□□ -1.81
CHRNA4P43681 RPL23AP7-203ENST00000449021 469 ntBASIC3.77□□□□□ -1.81
CHRNA4P43681 CENPBD1P1-201ENST00000464061 469 ntBASIC3.77□□□□□ -1.81
CHRNA4P43681 AC078817.1-201ENST00000492623 435 ntBASIC3.77□□□□□ -1.81
CHRNA4P43681 RNU6-1337P-201ENST00000516525 95 ntBASIC3.77□□□□□ -1.81
CHRNA4P43681 RNU6-113P-201ENST00000516653 101 ntBASIC3.77□□□□□ -1.81
CHRNA4P43681 SNORA67.7-201ENST00000516664 135 ntBASIC3.77□□□□□ -1.81
CHRNA4P43681 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CHRNA4P43681 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.77□□□□□ -1.81
CHRNA4P43681 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.77□□□□□ -1.81
CHRNA4P43681 MIR5685-201ENST00000579080 79 ntBASIC3.77□□□□□ -1.81
CHRNA4P43681 AC105245.1-201ENST00000581934 244 ntBASIC3.77□□□□□ -1.81
CHRNA4P43681 MIR3158-1-201ENST00000583596 81 ntBASIC3.77□□□□□ -1.81
CHRNA4P43681 AC244505.7-201ENST00000599675 272 ntBASIC3.77□□□□□ -1.81
CHRNA4P43681 AC012468.1-201ENST00000604888 430 ntBASIC3.77□□□□□ -1.81
CHRNA4P43681 AL136360.1-201ENST00000503377 1900 ntBASIC3.77□□□□□ -1.81
CHRNA4P43681 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
CHRNA4P43681 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.77□□□□□ -1.81
CHRNA4P43681 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
CHRNA4P43681 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.76□□□□□ -1.81
CHRNA4P43681 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
CHRNA4P43681 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CHRNA4P43681 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
CHRNA4P43681 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CHRNA4P43681 Y_RNA.17-201ENST00000362433 111 ntBASIC3.76□□□□□ -1.81
CHRNA4P43681 Y_RNA.93-201ENST00000363066 109 ntBASIC3.76□□□□□ -1.81
CHRNA4P43681 SNORA67.2-201ENST00000384300 149 ntBASIC3.76□□□□□ -1.81
CHRNA4P43681 U8.12-201ENST00000384701 133 ntBASIC3.76□□□□□ -1.81
CHRNA4P43681 RN7SKP156-201ENST00000410308 342 ntBASIC3.76□□□□□ -1.81
CHRNA4P43681 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms