Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 uc_338.16-201ENST00000621804 95 ntBASIC-0.63□□□□□ -2.51
SNCAP37840 AC093875.1-201ENST00000623688 504 ntBASIC-0.63□□□□□ -2.51
SNCAP37840 AL450472.1-202ENST00000637286 180 ntBASIC-0.63□□□□□ -2.51
SNCAP37840 AC099654.8-201ENST00000637757 681 ntBASIC-0.63□□□□□ -2.51
SNCAP37840 RNU6-853P-201ENST00000364306 107 ntBASIC-0.64□□□□□ -2.51
SNCAP37840 RNU6-654P-201ENST00000364373 107 ntBASIC-0.64□□□□□ -2.51
SNCAP37840 RNU6-424P-201ENST00000384367 105 ntBASIC-0.64□□□□□ -2.51
SNCAP37840 U8.16-201ENST00000391279 133 ntBASIC-0.64□□□□□ -2.51
SNCAP37840 RNU2-42P-201ENST00000410697 113 ntBASIC-0.64□□□□□ -2.51
SNCAP37840 RNU4-22P-201ENST00000411058 166 ntBASIC-0.64□□□□□ -2.51
SNCAP37840 CALM2P4-201ENST00000430810 426 ntBASIC-0.64□□□□□ -2.51
SNCAP37840 AC093899.1-201ENST00000457984 376 ntBASIC-0.64□□□□□ -2.51
SNCAP37840 RNU7-56P-201ENST00000458744 62 ntBASIC-0.64□□□□□ -2.51
SNCAP37840 AC108729.2-201ENST00000476543 840 ntBASIC-0.64□□□□□ -2.51
SNCAP37840 AC079382.1-201ENST00000493346 557 ntBASIC-0.64□□□□□ -2.51
SNCAP37840 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC-0.64□□□□□ -2.51
SNCAP37840 Y_RNA.673-201ENST00000516306 88 ntBASIC-0.64□□□□□ -2.51
SNCAP37840 RNU6-948P-201ENST00000516374 107 ntBASIC-0.64□□□□□ -2.51
SNCAP37840 RNU1-142P-201ENST00000516682 145 ntBASIC-0.64□□□□□ -2.51
SNCAP37840 OR8K2P-201ENST00000524645 927 ntBASIC-0.64□□□□□ -2.51
SNCAP37840 AC087883.1-201ENST00000551882 391 ntBASIC-0.64□□□□□ -2.51
SNCAP37840 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC-0.64□□□□□ -2.51
SNCAP37840 AL670379.3-201ENST00000605040 251 ntBASIC-0.64□□□□□ -2.51
SNCAP37840 AC098679.4-201ENST00000624241 654 ntBASIC-0.64□□□□□ -2.51
SNCAP37840 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC-0.64□□□□□ -2.51
SNCAP37840 AC121333.1-201ENST00000567488 2709 ntBASIC-0.65□□□□□ -2.51
SNCAP37840 RNA5SP457-201ENST00000363657 124 ntBASIC-0.65□□□□□ -2.51
SNCAP37840 AC083799.1-201ENST00000366451 910 ntBASIC-0.65□□□□□ -2.51
SNCAP37840 RNU6-269P-201ENST00000391077 97 ntBASIC-0.65□□□□□ -2.51
SNCAP37840 SNORA26.3-201ENST00000391119 136 ntBASIC-0.65□□□□□ -2.51
SNCAP37840 MIR1283-1-201ENST00000408494 87 ntBASIC-0.65□□□□□ -2.51
SNCAP37840 CDK8P2-201ENST00000415020 547 ntBASIC-0.65□□□□□ -2.51
SNCAP37840 AC092809.3-201ENST00000415453 231 ntBASIC-0.65□□□□□ -2.51
SNCAP37840 AL590135.1-201ENST00000422215 156 ntBASIC-0.65□□□□□ -2.51
SNCAP37840 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC-0.65□□□□□ -2.51
SNCAP37840 AC019205.3-201ENST00000424573 156 ntBASIC-0.65□□□□□ -2.51
SNCAP37840 AC004854.1-201ENST00000440356 349 ntBASIC-0.65□□□□□ -2.51
SNCAP37840 AC016700.2-201ENST00000446011 156 ntBASIC-0.65□□□□□ -2.51
SNCAP37840 ZNF736P5Y-201ENST00000451173 805 ntBASIC-0.65□□□□□ -2.51
SNCAP37840 RNU7-159P-201ENST00000459284 62 ntBASIC-0.65□□□□□ -2.51
SNCAP37840 AC015911.1-201ENST00000495111 156 ntBASIC-0.65□□□□□ -2.51
SNCAP37840 AC112206.4-201ENST00000515142 405 ntBASIC-0.65□□□□□ -2.51
SNCAP37840 IGLVI-20-201ENST00000519296 130 ntBASIC-0.65□□□□□ -2.51
SNCAP37840 AL158211.1-201ENST00000566763 763 ntBASIC-0.65□□□□□ -2.51
SNCAP37840 AC011921.3-201ENST00000605540 361 ntBASIC-0.65□□□□□ -2.51
SNCAP37840 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC-0.65□□□□□ -2.51
SNCAP37840 AC104458.1-201ENST00000608243 463 ntBASIC-0.65□□□□□ -2.51
SNCAP37840 uc_338.6-201ENST00000613544 171 ntBASIC-0.65□□□□□ -2.51
SNCAP37840 U6.42-201ENST00000618440 107 ntBASIC-0.65□□□□□ -2.51
SNCAP37840 SNORD114-31-201ENST00000363219 75 ntBASIC-0.66□□□□□ -2.52
SNCAP37840 SNORA36.1-201ENST00000363424 132 ntBASIC-0.66□□□□□ -2.52
SNCAP37840 RNU5A-8P-201ENST00000364102 114 ntBASIC-0.66□□□□□ -2.52
SNCAP37840 RNU6-1141P-201ENST00000364520 107 ntBASIC-0.66□□□□□ -2.52
SNCAP37840 Y_RNA.280-201ENST00000364765 112 ntBASIC-0.66□□□□□ -2.52
SNCAP37840 MIR526A1-201ENST00000384897 85 ntBASIC-0.66□□□□□ -2.52
SNCAP37840 MIR196A2-201ENST00000385189 110 ntBASIC-0.66□□□□□ -2.52
SNCAP37840 RNU6-278P-201ENST00000390945 109 ntBASIC-0.66□□□□□ -2.52
SNCAP37840 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC-0.66□□□□□ -2.52
SNCAP37840 AC244670.1-201ENST00000436879 112 ntBASIC-0.66□□□□□ -2.52
SNCAP37840 AC005042.3-201ENST00000453230 174 ntBASIC-0.66□□□□□ -2.52
SNCAP37840 AC107401.1-201ENST00000503426 685 ntBASIC-0.66□□□□□ -2.52
SNCAP37840 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC-0.66□□□□□ -2.52
SNCAP37840 RNU7-128P-201ENST00000517247 62 ntBASIC-0.66□□□□□ -2.52
SNCAP37840 MTCO3P15-201ENST00000526563 574 ntBASIC-0.66□□□□□ -2.52
SNCAP37840 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC-0.66□□□□□ -2.52
SNCAP37840 AC009712.1-201ENST00000564938 316 ntBASIC-0.66□□□□□ -2.52
SNCAP37840 AL391840.1-201ENST00000571144 367 ntBASIC-0.66□□□□□ -2.52
SNCAP37840 AL117336.2-201ENST00000602435 335 ntBASIC-0.66□□□□□ -2.52
SNCAP37840 AC231657.1-201ENST00000624313 397 ntBASIC-0.66□□□□□ -2.52
SNCAP37840 FER-210ENST00000628534 558 ntTSL 5 BASIC-0.66□□□□□ -2.52
SNCAP37840 RNU6-161P-201ENST00000363051 106 ntBASIC-0.67□□□□□ -2.52
SNCAP37840 Y_RNA.256-201ENST00000364594 104 ntBASIC-0.67□□□□□ -2.52
SNCAP37840 RNU6-190P-201ENST00000384154 102 ntBASIC-0.67□□□□□ -2.52
SNCAP37840 RNU6-378P-201ENST00000384324 107 ntBASIC-0.67□□□□□ -2.52
SNCAP37840 RNA5SP300-201ENST00000391197 107 ntBASIC-0.67□□□□□ -2.52
SNCAP37840 RNU6-1304P-201ENST00000411374 106 ntBASIC-0.67□□□□□ -2.52
SNCAP37840 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC-0.67□□□□□ -2.52
SNCAP37840 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC-0.67□□□□□ -2.52
SNCAP37840 RNA5SP480-201ENST00000516840 109 ntBASIC-0.67□□□□□ -2.52
SNCAP37840 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC-0.67□□□□□ -2.52
SNCAP37840 MIR4645-201ENST00000583158 77 ntBASIC-0.67□□□□□ -2.52
SNCAP37840 AC009994.1-201ENST00000606889 253 ntBASIC-0.67□□□□□ -2.52
SNCAP37840 AL359075.3-201ENST00000613288 217 ntBASIC-0.67□□□□□ -2.52
SNCAP37840 AC026585.1-201ENST00000619582 524 ntBASIC-0.67□□□□□ -2.52
SNCAP37840 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC-0.68□□□□□ -2.52
SNCAP37840 MIR454-201ENST00000390180 115 ntBASIC-0.68□□□□□ -2.52
SNCAP37840 MIR892B-201ENST00000401279 77 ntBASIC-0.68□□□□□ -2.52
SNCAP37840 MIR1302-7-201ENST00000408841 72 ntBASIC-0.68□□□□□ -2.52
SNCAP37840 MTND3P17-201ENST00000416968 344 ntBASIC-0.68□□□□□ -2.52
SNCAP37840 ZNF885P-201ENST00000420174 1098 ntBASIC-0.68□□□□□ -2.52
SNCAP37840 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC-0.68□□□□□ -2.52
SNCAP37840 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC-0.68□□□□□ -2.52
SNCAP37840 AC069271.1-201ENST00000445577 156 ntBASIC-0.68□□□□□ -2.52
SNCAP37840 AL392103.1-201ENST00000447000 198 ntBASIC-0.68□□□□□ -2.52
SNCAP37840 AC092104.1-201ENST00000497346 1441 ntBASIC-0.68□□□□□ -2.52
SNCAP37840 RNU6-782P-201ENST00000516852 104 ntBASIC-0.68□□□□□ -2.52
SNCAP37840 DEFB131D-201ENST00000526803 184 ntBASIC-0.68□□□□□ -2.52
SNCAP37840 SNORA28-201ENST00000606769 126 ntBASIC-0.68□□□□□ -2.52
SNCAP37840 PART1_2.1-201ENST00000612397 250 ntBASIC-0.68□□□□□ -2.52
SNCAP37840 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC-0.68□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms