Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 AC093913.1-201ENST00000614178 329 ntBASIC0.33□□□□□ -2.36
CASQ1P31415 AC027807.2-201ENST00000616099 408 ntBASIC0.33□□□□□ -2.36
CASQ1P31415 AC009878.1-201ENST00000621819 340 ntBASIC0.33□□□□□ -2.36
CASQ1P31415 AC022418.1-201ENST00000624118 445 ntBASIC0.33□□□□□ -2.36
CASQ1P31415 MTND5P17-201ENST00000418405 1603 ntBASIC0.33□□□□□ -2.36
CASQ1P31415 SNORA20.2-201ENST00000383922 131 ntBASIC0.32□□□□□ -2.36
CASQ1P31415 RNY1P8-201ENST00000383970 114 ntBASIC0.32□□□□□ -2.36
CASQ1P31415 RNU6-74P-201ENST00000384235 107 ntBASIC0.32□□□□□ -2.36
CASQ1P31415 MIR586-201ENST00000385035 97 ntBASIC0.32□□□□□ -2.36
CASQ1P31415 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
CASQ1P31415 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC0.32□□□□□ -2.36
CASQ1P31415 MTCO2P23-201ENST00000425216 680 ntBASIC0.32□□□□□ -2.36
CASQ1P31415 AC084290.1-201ENST00000434995 374 ntBASIC0.32□□□□□ -2.36
CASQ1P31415 TAF9P1-201ENST00000445421 515 ntBASIC0.32□□□□□ -2.36
CASQ1P31415 AC009237.7-201ENST00000447357 229 ntBASIC0.32□□□□□ -2.36
CASQ1P31415 TAF9P2-201ENST00000454958 515 ntBASIC0.32□□□□□ -2.36
CASQ1P31415 RNU7-57P-201ENST00000459540 60 ntBASIC0.32□□□□□ -2.36
CASQ1P31415 AC025647.1-201ENST00000517879 253 ntBASIC0.32□□□□□ -2.36
CASQ1P31415 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC0.32□□□□□ -2.36
CASQ1P31415 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC0.32□□□□□ -2.36
CASQ1P31415 AP000811.1-201ENST00000603803 651 ntBASIC0.32□□□□□ -2.36
CASQ1P31415 AL096861.1-201ENST00000610899 123 ntBASIC0.32□□□□□ -2.36
CASQ1P31415 AC139792.3-201ENST00000623525 224 ntBASIC0.32□□□□□ -2.36
CASQ1P31415 MIR5087-201ENST00000635826 76 ntBASIC0.32□□□□□ -2.36
CASQ1P31415 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.31□□□□□ -2.36
CASQ1P31415 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC0.31□□□□□ -2.36
CASQ1P31415 RNU1-93P-201ENST00000364704 169 ntBASIC0.31□□□□□ -2.36
CASQ1P31415 RNU6-906P-201ENST00000384700 70 ntBASIC0.31□□□□□ -2.36
CASQ1P31415 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.31□□□□□ -2.36
CASQ1P31415 SNORD89-201ENST00000390981 114 ntBASIC0.31□□□□□ -2.36
CASQ1P31415 RNU1-119P-201ENST00000391122 165 ntBASIC0.31□□□□□ -2.36
CASQ1P31415 RNA5SP504-201ENST00000410676 117 ntBASIC0.31□□□□□ -2.36
CASQ1P31415 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC0.31□□□□□ -2.36
CASQ1P31415 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC0.31□□□□□ -2.36
CASQ1P31415 DAP3P1-201ENST00000441522 278 ntBASIC0.31□□□□□ -2.36
CASQ1P31415 USP9YP29-201ENST00000445112 563 ntBASIC0.31□□□□□ -2.36
CASQ1P31415 AL009048.1-201ENST00000450437 298 ntBASIC0.31□□□□□ -2.36
CASQ1P31415 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC0.31□□□□□ -2.36
CASQ1P31415 LINC01399-202ENST00000458450 244 ntBASIC0.31□□□□□ -2.36
CASQ1P31415 AC002350.1-201ENST00000490759 375 ntBASIC0.31□□□□□ -2.36
CASQ1P31415 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC0.31□□□□□ -2.36
CASQ1P31415 Y_RNA.672-201ENST00000516289 104 ntBASIC0.31□□□□□ -2.36
CASQ1P31415 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC0.31□□□□□ -2.36
CASQ1P31415 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC0.31□□□□□ -2.36
CASQ1P31415 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC0.31□□□□□ -2.36
CASQ1P31415 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC0.31□□□□□ -2.36
CASQ1P31415 MTND5P16-201ENST00000460269 1703 ntBASIC0.3□□□□□ -2.36
CASQ1P31415 AP000568.1-201ENST00000282964 442 ntBASIC0.3□□□□□ -2.36
CASQ1P31415 RNU6-266P-201ENST00000364225 107 ntBASIC0.3□□□□□ -2.36
CASQ1P31415 RNU6-1305P-201ENST00000364353 104 ntBASIC0.3□□□□□ -2.36
CASQ1P31415 RNU6-1127P-201ENST00000384580 107 ntBASIC0.3□□□□□ -2.36
CASQ1P31415 AL354692.1-201ENST00000423044 315 ntBASIC0.3□□□□□ -2.36
CASQ1P31415 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC0.3□□□□□ -2.36
CASQ1P31415 AL445305.1-201ENST00000432577 575 ntBASIC0.3□□□□□ -2.36
CASQ1P31415 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.3□□□□□ -2.36
CASQ1P31415 MTCO2P7-201ENST00000446518 666 ntBASIC0.3□□□□□ -2.36
CASQ1P31415 RPS29P27-201ENST00000463711 170 ntBASIC0.3□□□□□ -2.36
CASQ1P31415 SNORA68.3-201ENST00000515906 83 ntBASIC0.3□□□□□ -2.36
CASQ1P31415 AC027419.1-201ENST00000522976 328 ntBASIC0.3□□□□□ -2.36
CASQ1P31415 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC0.3□□□□□ -2.36
CASQ1P31415 MTCO3P23-201ENST00000561363 289 ntBASIC0.3□□□□□ -2.36
CASQ1P31415 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.3□□□□□ -2.36
CASQ1P31415 AC112191.3-201ENST00000604371 277 ntBASIC0.3□□□□□ -2.36
CASQ1P31415 SNORA28-201ENST00000606769 126 ntBASIC0.3□□□□□ -2.36
CASQ1P31415 7SK.10-201ENST00000621414 298 ntBASIC0.3□□□□□ -2.36
CASQ1P31415 AL442644.1-201ENST00000454390 3105 ntBASIC0.3□□□□□ -2.36
CASQ1P31415 RNU5B-2P-201ENST00000363036 113 ntBASIC0.29□□□□□ -2.36
CASQ1P31415 RNY1P10-201ENST00000363268 113 ntBASIC0.29□□□□□ -2.36
CASQ1P31415 SNORD113-6-201ENST00000363345 75 ntBASIC0.29□□□□□ -2.36
CASQ1P31415 RNU6-501P-201ENST00000364072 100 ntBASIC0.29□□□□□ -2.36
CASQ1P31415 RNU6-1240P-201ENST00000365155 104 ntBASIC0.29□□□□□ -2.36
CASQ1P31415 MIR487A-201ENST00000385009 80 ntBASIC0.29□□□□□ -2.36
CASQ1P31415 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.29□□□□□ -2.36
CASQ1P31415 CALM2P4-201ENST00000430810 426 ntBASIC0.29□□□□□ -2.36
CASQ1P31415 AL512286.1-201ENST00000439244 400 ntBASIC0.29□□□□□ -2.36
CASQ1P31415 AC093850.1-201ENST00000454121 251 ntBASIC0.29□□□□□ -2.36
CASQ1P31415 SNRPFP3-201ENST00000457792 225 ntBASIC0.29□□□□□ -2.36
CASQ1P31415 TPT1P7-201ENST00000458300 517 ntBASIC0.29□□□□□ -2.36
CASQ1P31415 SNORD27.1-201ENST00000516319 72 ntBASIC0.29□□□□□ -2.36
CASQ1P31415 RNA5SP102-201ENST00000516865 106 ntBASIC0.29□□□□□ -2.36
CASQ1P31415 AC106038.2-201ENST00000520706 568 ntBASIC0.29□□□□□ -2.36
CASQ1P31415 MIR3192-201ENST00000584920 77 ntBASIC0.29□□□□□ -2.36
CASQ1P31415 AL391903.3-201ENST00000612158 163 ntBASIC0.29□□□□□ -2.36
CASQ1P31415 AC068792.1-201ENST00000621354 417 ntBASIC0.29□□□□□ -2.36
CASQ1P31415 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.29□□□□□ -2.36
CASQ1P31415 AC090625.1-201ENST00000357130 210 ntBASIC0.28□□□□□ -2.36
CASQ1P31415 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
CASQ1P31415 RNU6-1029P-201ENST00000384109 107 ntBASIC0.28□□□□□ -2.36
CASQ1P31415 SNORD70.1-201ENST00000391007 85 ntBASIC0.28□□□□□ -2.36
CASQ1P31415 AL596276.1-201ENST00000434465 418 ntBASIC0.28□□□□□ -2.36
CASQ1P31415 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC0.28□□□□□ -2.36
CASQ1P31415 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.28□□□□□ -2.36
CASQ1P31415 snoU109.3-201ENST00000459477 145 ntBASIC0.28□□□□□ -2.36
CASQ1P31415 RNU7-94P-201ENST00000459576 63 ntBASIC0.28□□□□□ -2.36
CASQ1P31415 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.28□□□□□ -2.36
CASQ1P31415 FRG2DP-202ENST00000566967 323 ntBASIC0.28□□□□□ -2.36
CASQ1P31415 MIR5093-201ENST00000583199 100 ntBASIC0.28□□□□□ -2.36
CASQ1P31415 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC0.28□□□□□ -2.36
CASQ1P31415 AC004832.4-201ENST00000608952 331 ntBASIC0.28□□□□□ -2.36
CASQ1P31415 AL049777.1-201ENST00000622740 518 ntBASIC0.28□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms