Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 AC097372.5-201ENST00000623665 376 ntBASIC2.58□□□□□ -2
HOXA11P31270 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
HOXA11P31270 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
HOXA11P31270 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.57□□□□□ -2
HOXA11P31270 Y_RNA.26-201ENST00000362539 101 ntBASIC2.57□□□□□ -2
HOXA11P31270 Y_RNA.307-201ENST00000365022 117 ntBASIC2.57□□□□□ -2
HOXA11P31270 Y_RNA.376-201ENST00000365638 108 ntBASIC2.57□□□□□ -2
HOXA11P31270 SNORA29-201ENST00000384183 140 ntBASIC2.57□□□□□ -2
HOXA11P31270 RNU6-708P-201ENST00000384217 107 ntBASIC2.57□□□□□ -2
HOXA11P31270 U8.10-201ENST00000384260 133 ntBASIC2.57□□□□□ -2
HOXA11P31270 Y_RNA.471-201ENST00000384312 102 ntBASIC2.57□□□□□ -2
HOXA11P31270 RNU6-19P-201ENST00000384718 107 ntBASIC2.57□□□□□ -2
HOXA11P31270 RNU6-713P-201ENST00000384761 107 ntBASIC2.57□□□□□ -2
HOXA11P31270 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.57□□□□□ -2
HOXA11P31270 RNU6-1245P-201ENST00000411130 106 ntBASIC2.57□□□□□ -2
HOXA11P31270 RPS26P42-201ENST00000413485 326 ntBASIC2.57□□□□□ -2
HOXA11P31270 CYCSP48-201ENST00000417124 323 ntBASIC2.57□□□□□ -2
HOXA11P31270 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.57□□□□□ -2
HOXA11P31270 AC018634.1-201ENST00000437554 401 ntBASIC2.57□□□□□ -2
HOXA11P31270 LINC01399-202ENST00000458450 244 ntBASIC2.57□□□□□ -2
HOXA11P31270 SNORD127-201ENST00000458892 86 ntBASIC2.57□□□□□ -2
HOXA11P31270 AC104564.1-201ENST00000493028 407 ntBASIC2.57□□□□□ -2
HOXA11P31270 AC010469.2-201ENST00000496412 480 ntBASIC2.57□□□□□ -2
HOXA11P31270 RNU6-1012P-201ENST00000516606 109 ntBASIC2.57□□□□□ -2
HOXA11P31270 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.57□□□□□ -2
HOXA11P31270 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.57□□□□□ -2
HOXA11P31270 AC090897.2-201ENST00000581715 130 ntBASIC2.57□□□□□ -2
HOXA11P31270 AC069294.1-201ENST00000608397 350 ntBASIC2.57□□□□□ -2
HOXA11P31270 AC137590.2-201ENST00000619709 240 ntBASIC2.57□□□□□ -2
HOXA11P31270 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
HOXA11P31270 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.56□□□□□ -2
HOXA11P31270 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.56□□□□□ -2
HOXA11P31270 MIR21-201ENST00000362134 72 ntBASIC2.56□□□□□ -2
HOXA11P31270 RNU6-1301P-201ENST00000362724 104 ntBASIC2.56□□□□□ -2
HOXA11P31270 SNORD56.1-201ENST00000362913 68 ntBASIC2.56□□□□□ -2
HOXA11P31270 Y_RNA.288-201ENST00000364854 92 ntBASIC2.56□□□□□ -2
HOXA11P31270 RNU6-806P-201ENST00000365147 105 ntBASIC2.56□□□□□ -2
HOXA11P31270 Y_RNA.358-201ENST00000365491 99 ntBASIC2.56□□□□□ -2
HOXA11P31270 Y_RNA.461-201ENST00000384263 103 ntBASIC2.56□□□□□ -2
HOXA11P31270 RNU6-1026P-201ENST00000384465 108 ntBASIC2.56□□□□□ -2
HOXA11P31270 MIR153-2-201ENST00000385225 87 ntBASIC2.56□□□□□ -2
HOXA11P31270 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.56□□□□□ -2
HOXA11P31270 SNORD115-46-201ENST00000390982 71 ntBASIC2.56□□□□□ -2
HOXA11P31270 MIR1261-201ENST00000408659 82 ntBASIC2.56□□□□□ -2
HOXA11P31270 RNU6-121P-201ENST00000410525 99 ntBASIC2.56□□□□□ -2
HOXA11P31270 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.56□□□□□ -2
HOXA11P31270 EIF1P2-201ENST00000428233 350 ntBASIC2.56□□□□□ -2
HOXA11P31270 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.56□□□□□ -2
HOXA11P31270 AC011753.1-201ENST00000451001 220 ntBASIC2.56□□□□□ -2
HOXA11P31270 U8.22-201ENST00000459141 133 ntBASIC2.56□□□□□ -2
HOXA11P31270 AC080013.2-201ENST00000460866 323 ntBASIC2.56□□□□□ -2
HOXA11P31270 RPS23P5-201ENST00000495419 428 ntBASIC2.56□□□□□ -2
HOXA11P31270 SNORA31.6-201ENST00000516241 130 ntBASIC2.56□□□□□ -2
HOXA11P31270 RNU5B-3P-201ENST00000516601 115 ntBASIC2.56□□□□□ -2
HOXA11P31270 ACA59.2-201ENST00000517061 156 ntBASIC2.56□□□□□ -2
HOXA11P31270 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.56□□□□□ -2
HOXA11P31270 AC007375.1-201ENST00000554513 578 ntBASIC2.56□□□□□ -2
HOXA11P31270 MIR5007-201ENST00000583098 95 ntBASIC2.56□□□□□ -2
HOXA11P31270 AL049779.4-201ENST00000604500 156 ntBASIC2.56□□□□□ -2
HOXA11P31270 RNU6-91P-201ENST00000607774 107 ntBASIC2.56□□□□□ -2
HOXA11P31270 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.56□□□□□ -2
HOXA11P31270 MIR203B-201ENST00000636080 86 ntBASIC2.56□□□□□ -2
HOXA11P31270 U6.92-201ENST00000636464 89 ntBASIC2.56□□□□□ -2
HOXA11P31270 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.56□□□□□ -2
HOXA11P31270 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
HOXA11P31270 AC092268.1-201ENST00000342691 405 ntBASIC2.55□□□□□ -2
HOXA11P31270 Y_RNA.19-201ENST00000362462 99 ntBASIC2.55□□□□□ -2
HOXA11P31270 Y_RNA.64-201ENST00000362845 102 ntBASIC2.55□□□□□ -2
HOXA11P31270 RNU6-486P-201ENST00000363116 107 ntBASIC2.55□□□□□ -2
HOXA11P31270 Y_RNA.105-201ENST00000363182 111 ntBASIC2.55□□□□□ -2
HOXA11P31270 RNU6-142P-201ENST00000384019 107 ntBASIC2.55□□□□□ -2
HOXA11P31270 Y_RNA.447-201ENST00000384184 113 ntBASIC2.55□□□□□ -2
HOXA11P31270 MRPL35P1-201ENST00000404272 572 ntBASIC2.55□□□□□ -2
HOXA11P31270 MIR1302-6-201ENST00000408466 90 ntBASIC2.55□□□□□ -2
HOXA11P31270 RN7SKP223-201ENST00000410582 62 ntBASIC2.55□□□□□ -2
HOXA11P31270 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.55□□□□□ -2
HOXA11P31270 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.55□□□□□ -2
HOXA11P31270 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.55□□□□□ -2
HOXA11P31270 AL353705.4-201ENST00000449661 238 ntBASIC2.55□□□□□ -2
HOXA11P31270 AC087477.1-201ENST00000465747 340 ntBASIC2.55□□□□□ -2
HOXA11P31270 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.55□□□□□ -2
HOXA11P31270 AC016632.1-201ENST00000503994 196 ntBASIC2.55□□□□□ -2
HOXA11P31270 RNA5SP112-201ENST00000515937 99 ntBASIC2.55□□□□□ -2
HOXA11P31270 RNU6-581P-201ENST00000516214 105 ntBASIC2.55□□□□□ -2
HOXA11P31270 SNORA40.15-201ENST00000516884 107 ntBASIC2.55□□□□□ -2
HOXA11P31270 AP003733.2-201ENST00000529409 171 ntBASIC2.55□□□□□ -2
HOXA11P31270 AC027288.2-201ENST00000553028 243 ntBASIC2.55□□□□□ -2
HOXA11P31270 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.55□□□□□ -2
HOXA11P31270 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.55□□□□□ -2
HOXA11P31270 AC091152.3-201ENST00000604227 325 ntBASIC2.55□□□□□ -2
HOXA11P31270 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.55□□□□□ -2
HOXA11P31270 AL359854.1-201ENST00000614203 1594 ntBASIC2.55□□□□□ -2
HOXA11P31270 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.55□□□□□ -2
HOXA11P31270 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.55□□□□□ -2
HOXA11P31270 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
HOXA11P31270 ZNF271P-202ENST00000465539 1970 ntBASIC2.54□□□□□ -2
HOXA11P31270 Y_RNA.350-201ENST00000365409 98 ntBASIC2.54□□□□□ -2
HOXA11P31270 Y_RNA.483-201ENST00000384380 101 ntBASIC2.54□□□□□ -2
HOXA11P31270 Y_RNA.489-201ENST00000384410 101 ntBASIC2.54□□□□□ -2
HOXA11P31270 RNU6-748P-201ENST00000384648 107 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms