Protein–RNA interactions for Protein: P25940

COL5A3, Collagen alpha-3(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,745 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3P25940 RNU6-1222P-201ENST00000384615 107 ntBASIC0.99□□□□□ -2.25
COL5A3P25940 HMGN2P39-201ENST00000398005 273 ntBASIC0.99□□□□□ -2.25
COL5A3P25940 MIR450B-201ENST00000401182 78 ntBASIC0.99□□□□□ -2.25
COL5A3P25940 RNU6-1245P-201ENST00000411130 106 ntBASIC0.99□□□□□ -2.25
COL5A3P25940 ZNF885P-201ENST00000420174 1098 ntBASIC0.99□□□□□ -2.25
COL5A3P25940 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.99□□□□□ -2.25
COL5A3P25940 ERLEC1P1-201ENST00000433806 578 ntBASIC0.99□□□□□ -2.25
COL5A3P25940 RNU7-167P-201ENST00000459160 62 ntBASIC0.99□□□□□ -2.25
COL5A3P25940 AC008834.1-201ENST00000511612 175 ntBASIC0.99□□□□□ -2.25
COL5A3P25940 RNU2-53P-201ENST00000516257 147 ntBASIC0.99□□□□□ -2.25
COL5A3P25940 AC079598.5-201ENST00000547460 117 ntBASIC0.99□□□□□ -2.25
COL5A3P25940 AL118558.2-201ENST00000556294 238 ntBASIC0.99□□□□□ -2.25
COL5A3P25940 TPRKBP2-201ENST00000565969 475 ntBASIC0.99□□□□□ -2.25
COL5A3P25940 MIR5692C1-201ENST00000585309 91 ntBASIC0.99□□□□□ -2.25
COL5A3P25940 AC080078.2-201ENST00000603766 501 ntBASIC0.99□□□□□ -2.25
COL5A3P25940 AC092747.3-201ENST00000603769 301 ntBASIC0.99□□□□□ -2.25
COL5A3P25940 AC107304.1-201ENST00000604229 296 ntBASIC0.99□□□□□ -2.25
COL5A3P25940 AL357078.3-201ENST00000607528 618 ntBASIC0.99□□□□□ -2.25
COL5A3P25940 AC064836.2-201ENST00000609491 462 ntBASIC0.99□□□□□ -2.25
COL5A3P25940 AC103705.1-201ENST00000619013 241 ntBASIC0.99□□□□□ -2.25
COL5A3P25940 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC0.99□□□□□ -2.25
COL5A3P25940 MIR3662-201ENST00000637030 95 ntBASIC0.99□□□□□ -2.25
COL5A3P25940 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.99□□□□□ -2.25
COL5A3P25940 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC0.99□□□□□ -2.25
COL5A3P25940 RNU6-78P-201ENST00000362897 107 ntBASIC0.98□□□□□ -2.25
COL5A3P25940 SNORD113-7-201ENST00000363762 77 ntBASIC0.98□□□□□ -2.25
COL5A3P25940 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
COL5A3P25940 RNU2-41P-201ENST00000410991 178 ntBASIC0.98□□□□□ -2.25
COL5A3P25940 AL158823.1-201ENST00000418441 478 ntBASIC0.98□□□□□ -2.25
COL5A3P25940 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC0.98□□□□□ -2.25
COL5A3P25940 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC0.98□□□□□ -2.25
COL5A3P25940 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC0.98□□□□□ -2.25
COL5A3P25940 AL353752.1-201ENST00000454946 260 ntBASIC0.98□□□□□ -2.25
COL5A3P25940 RNU6-1281P-201ENST00000516223 105 ntBASIC0.98□□□□□ -2.25
COL5A3P25940 Y_RNA.682-201ENST00000516457 100 ntBASIC0.98□□□□□ -2.25
COL5A3P25940 RNU11-2P-201ENST00000516898 142 ntBASIC0.98□□□□□ -2.25
COL5A3P25940 AC109479.2-201ENST00000517842 174 ntBASIC0.98□□□□□ -2.25
COL5A3P25940 MDM2-233ENST00000545204 398 ntTSL 5 BASIC0.98□□□□□ -2.25
COL5A3P25940 MTCO3P23-201ENST00000561363 289 ntBASIC0.98□□□□□ -2.25
COL5A3P25940 MIR3198-2-201ENST00000577868 80 ntBASIC0.98□□□□□ -2.25
COL5A3P25940 MIR5583-1-201ENST00000580941 59 ntBASIC0.98□□□□□ -2.25
COL5A3P25940 AC012557.2-201ENST00000605919 418 ntBASIC0.98□□□□□ -2.25
COL5A3P25940 MIR2909-201ENST00000617113 69 ntBASIC0.98□□□□□ -2.25
COL5A3P25940 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
COL5A3P25940 AC068137.4-201ENST00000638485 296 ntBASIC0.98□□□□□ -2.25
COL5A3P25940 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC0.98□□□□□ -2.25
COL5A3P25940 AC245060.5-201ENST00000610778 3293 ntBASIC0.98□□□□□ -2.25
COL5A3P25940 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.98□□□□□ -2.25
COL5A3P25940 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.98□□□□□ -2.25
COL5A3P25940 Y_RNA.151-201ENST00000363566 112 ntBASIC0.98□□□□□ -2.25
COL5A3P25940 RNU6-266P-201ENST00000364225 107 ntBASIC0.98□□□□□ -2.25
COL5A3P25940 Y_RNA.256-201ENST00000364594 104 ntBASIC0.98□□□□□ -2.25
COL5A3P25940 RNU6-214P-201ENST00000384130 107 ntBASIC0.98□□□□□ -2.25
COL5A3P25940 Y_RNA.516-201ENST00000384541 124 ntBASIC0.98□□□□□ -2.25
COL5A3P25940 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
COL5A3P25940 RNU11-3P-201ENST00000391111 133 ntBASIC0.98□□□□□ -2.25
COL5A3P25940 MIR548F1-201ENST00000408667 84 ntBASIC0.98□□□□□ -2.25
COL5A3P25940 MIR1197-201ENST00000408818 88 ntBASIC0.98□□□□□ -2.25
COL5A3P25940 RNA5SP193-201ENST00000410353 107 ntBASIC0.98□□□□□ -2.25
COL5A3P25940 RNU6-373P-201ENST00000411247 98 ntBASIC0.98□□□□□ -2.25
COL5A3P25940 UBE2V1P8-201ENST00000437166 265 ntBASIC0.98□□□□□ -2.25
COL5A3P25940 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC0.98□□□□□ -2.25
COL5A3P25940 RPL39P29-201ENST00000447779 157 ntBASIC0.98□□□□□ -2.25
COL5A3P25940 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC0.98□□□□□ -2.25
COL5A3P25940 RNU6-1208P-201ENST00000459588 107 ntBASIC0.98□□□□□ -2.25
COL5A3P25940 SNRPGP7-201ENST00000469016 106 ntBASIC0.98□□□□□ -2.25
COL5A3P25940 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC0.98□□□□□ -2.25
COL5A3P25940 CCDC34P1-201ENST00000507441 517 ntBASIC0.98□□□□□ -2.25
COL5A3P25940 RNU6-718P-201ENST00000516166 105 ntBASIC0.98□□□□□ -2.25
COL5A3P25940 RNU6-1088P-201ENST00000516850 104 ntBASIC0.98□□□□□ -2.25
COL5A3P25940 AL356157.2-201ENST00000605122 111 ntBASIC0.98□□□□□ -2.25
COL5A3P25940 U4.5-201ENST00000617137 123 ntBASIC0.98□□□□□ -2.25
COL5A3P25940 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.98□□□□□ -2.25
COL5A3P25940 AC008163.1-202ENST00000636004 2889 ntBASIC0.97□□□□□ -2.25
COL5A3P25940 Y_RNA.6-201ENST00000362350 114 ntBASIC0.97□□□□□ -2.25
COL5A3P25940 Y_RNA.167-201ENST00000363735 109 ntBASIC0.97□□□□□ -2.25
COL5A3P25940 RNU6-1141P-201ENST00000364520 107 ntBASIC0.97□□□□□ -2.25
COL5A3P25940 RNU6-1303P-201ENST00000364841 107 ntBASIC0.97□□□□□ -2.25
COL5A3P25940 RNU6-487P-201ENST00000365430 104 ntBASIC0.97□□□□□ -2.25
COL5A3P25940 RNU6-827P-201ENST00000365553 106 ntBASIC0.97□□□□□ -2.25
COL5A3P25940 RNU6-877P-201ENST00000383868 107 ntBASIC0.97□□□□□ -2.25
COL5A3P25940 SNORA32.2-201ENST00000384049 122 ntBASIC0.97□□□□□ -2.25
COL5A3P25940 MIR29C-201ENST00000385231 88 ntBASIC0.97□□□□□ -2.25
COL5A3P25940 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC0.97□□□□□ -2.25
COL5A3P25940 CBX3P9-201ENST00000402326 552 ntBASIC0.97□□□□□ -2.25
COL5A3P25940 AL591034.2-201ENST00000402839 359 ntBASIC0.97□□□□□ -2.25
COL5A3P25940 Y_RNA.597-201ENST00000410463 100 ntBASIC0.97□□□□□ -2.25
COL5A3P25940 Y_RNA.599-201ENST00000410489 109 ntBASIC0.97□□□□□ -2.25
COL5A3P25940 Y_RNA.619-201ENST00000410951 90 ntBASIC0.97□□□□□ -2.25
COL5A3P25940 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC0.97□□□□□ -2.25
COL5A3P25940 C8orf59P1-201ENST00000429930 303 ntBASIC0.97□□□□□ -2.25
COL5A3P25940 AC244670.1-201ENST00000436879 112 ntBASIC0.97□□□□□ -2.25
COL5A3P25940 MTND1P34-201ENST00000438556 671 ntBASIC0.97□□□□□ -2.25
COL5A3P25940 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC0.97□□□□□ -2.25
COL5A3P25940 MTCO2P3-201ENST00000442543 421 ntBASIC0.97□□□□□ -2.25
COL5A3P25940 snoU13.14-201ENST00000459372 104 ntBASIC0.97□□□□□ -2.25
COL5A3P25940 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.97□□□□□ -2.25
COL5A3P25940 AC011352.1-201ENST00000512300 793 ntBASIC0.97□□□□□ -2.25
COL5A3P25940 RNU4ATAC8P-201ENST00000516196 109 ntBASIC0.97□□□□□ -2.25
COL5A3P25940 RNU6-323P-201ENST00000521915 107 ntBASIC0.97□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms