| PTPN2 | P17706 | PLCL2-AS1-201 | ENST00000414844 | 311 nt | TSL 2 BASIC | 2.39 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | LINC01344-201 | ENST00000420760 | 261 nt | TSL 3 BASIC | 2.39 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | MS4A4E-203 | ENST00000425663 | 350 nt | TSL 1 (best) BASIC | 2.39 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | AC027124.2-201 | ENST00000428249 | 105 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | RPS15AP28-201 | ENST00000435088 | 386 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | RNU7-169P-201 | ENST00000459456 | 61 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | AP000870.1-201 | ENST00000472927 | 406 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | LINC02064-201 | ENST00000506492 | 470 nt | TSL 5 BASIC | 2.39 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | SNORA48.11-201 | ENST00000517015 | 89 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | EBAG9-207 | ENST00000531677 | 777 nt | TSL 1 (best) BASIC | 2.39 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | AC012594.1-269 | ENST00000600489 | 628 nt | TSL 5 BASIC | 2.39 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | CCDC148-202 | ENST00000409187 | 2523 nt | APPRIS P1 TSL 5 BASIC | 2.39 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | AC005336.3-201 | ENST00000623833 | 2679 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | FGF7-206 | ENST00000614567 | 3936 nt | APPRIS P1 TSL 1 (best) BASIC | 2.38 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | Y_RNA.5-201 | ENST00000362334 | 102 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | RNU6-743P-201 | ENST00000364151 | 106 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | SNORD32B-201 | ENST00000364460 | 84 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | SNORA18.2-201 | ENST00000383865 | 132 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | Y_RNA.428-201 | ENST00000384078 | 102 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | Y_RNA.445-201 | ENST00000384168 | 102 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | MIR625-201 | ENST00000385047 | 85 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | MTND1P14-201 | ENST00000427400 | 950 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | AC007677.1-201 | ENST00000445757 | 515 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | MTND5P16-201 | ENST00000460269 | 1703 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | RNU6-976P-201 | ENST00000516086 | 111 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | RNU6-58P-201 | ENST00000517143 | 103 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | AC025871.1-202 | ENST00000518819 | 432 nt | TSL 3 BASIC | 2.38 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | CYCSP26-201 | ENST00000534107 | 320 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | AC027288.2-201 | ENST00000553028 | 243 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | UBL5P4-201 | ENST00000562584 | 236 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | AC087463.2-201 | ENST00000565943 | 472 nt | TSL 3 BASIC | 2.38 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | AC078899.2-201 | ENST00000595282 | 212 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | MIR6840-201 | ENST00000611937 | 71 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | TEX41-243 | ENST00000614173 | 190 nt | TSL 5 BASIC | 2.38 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | AC012640.5-201 | ENST00000623897 | 319 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | TTK-202 | ENST00000369798 | 3010 nt | APPRIS P3 TSL 1 (best) BASIC | 2.37 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | MIR21-201 | ENST00000362134 | 72 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | Y_RNA.358-201 | ENST00000365491 | 99 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | SNORD23.1-201 | ENST00000408212 | 104 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | MIR1289-2-201 | ENST00000408360 | 111 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | AC006159.2-201 | ENST00000421965 | 692 nt | TSL 2 BASIC | 2.37 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | AC096644.2-201 | ENST00000429278 | 159 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | WARS2P1-201 | ENST00000429678 | 537 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | HMGN2P3-201 | ENST00000433603 | 273 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | HMGN2P5-201 | ENST00000436882 | 273 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | AC116666.1-201 | ENST00000453915 | 551 nt | TSL 5 BASIC | 2.37 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | Y_RNA.639-201 | ENST00000458981 | 102 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | AC107032.1-201 | ENST00000485945 | 480 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | LNX1-AS1-203 | ENST00000511989 | 488 nt | TSL 2 BASIC | 2.37 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | SNORD116.3-201 | ENST00000517176 | 78 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | Z84484.1-202 | ENST00000612718 | 60 nt | TSL 5 BASIC | 2.37 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | uc_338.22-201 | ENST00000622722 | 187 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | FAR1-204 | ENST00000532502 | 5820 nt | TSL 2 BASIC | 2.37 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | EYS-211 | ENST00000503581 | 10589 nt | APPRIS P3 TSL 5 BASIC | 2.37 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | FSIP2-206 | ENST00000611759 | 3882 nt | APPRIS ALT2 TSL 5 BASIC | 2.36 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | NEDD1-204 | ENST00000457368 | 3162 nt | TSL 2 BASIC | 2.36 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | Y_RNA.364-201 | ENST00000365532 | 101 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | RNU6-26P-201 | ENST00000383985 | 107 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | RNU6-474P-201 | ENST00000384243 | 107 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | Y_RNA.496-201 | ENST00000384444 | 101 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | RNU1-148P-201 | ENST00000384472 | 162 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | MIR221-201 | ENST00000385135 | 110 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | AL079342.1-201 | ENST00000401460 | 267 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | Y_RNA.605-201 | ENST00000410577 | 105 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | CBX3P6-201 | ENST00000430257 | 527 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | USP9YP16-201 | ENST00000430287 | 407 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | CEP57L1P1-201 | ENST00000430943 | 1201 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | AC018634.1-201 | ENST00000437554 | 401 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | AC099799.1-201 | ENST00000439809 | 192 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | AL035666.1-201 | ENST00000446195 | 348 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | MIR4435-2HG-213 | ENST00000451884 | 423 nt | TSL 3 BASIC | 2.36 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | USP9YP23-201 | ENST00000455085 | 407 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | snoU13.23-201 | ENST00000458863 | 104 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | AC116563.1-201 | ENST00000505454 | 396 nt | TSL 3 BASIC | 2.36 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | RNU6-1198P-201 | ENST00000516904 | 67 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | DEFB131C-201 | ENST00000528817 | 165 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | MIR5695-201 | ENST00000579717 | 85 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | AC044792.1-201 | ENST00000593294 | 196 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | AC087588.2-201 | ENST00000617667 | 426 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | CCDC30-201 | ENST00000340612 | 2664 nt | APPRIS P2 TSL 5 BASIC | 2.36 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | C6orf10-201 | ENST00000375007 | 2125 nt | APPRIS ALT2 TSL 5 BASIC | 2.36 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | XPO4-202 | ENST00000400602 | 9884 nt | APPRIS ALT1 TSL 5 BASIC | 2.36 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | ZNF72P-201 | ENST00000425869 | 1908 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | Y_RNA.31-201 | ENST00000362574 | 102 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | SNORA51.11-201 | ENST00000384442 | 131 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | SNORA69.1-201 | ENST00000390904 | 137 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | AL354751.2-201 | ENST00000415471 | 210 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | LINC01564-201 | ENST00000448327 | 566 nt | TSL 3 BASIC | 2.35 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | MTCO3P8-201 | ENST00000453691 | 755 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | U8.22-201 | ENST00000459141 | 133 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | AC007215.1-201 | ENST00000464893 | 276 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | RNU5F-4P-201 | ENST00000516581 | 114 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | RNA5SP54-201 | ENST00000516951 | 92 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | RNU7-4P-201 | ENST00000516961 | 62 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | AC069133.1-201 | ENST00000522857 | 566 nt | TSL 4 BASIC | 2.35 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | AC087664.2-201 | ENST00000522898 | 551 nt | TSL 4 BASIC | 2.35 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | AC022616.8-201 | ENST00000533569 | 253 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | AC018630.3-201 | ENST00000542637 | 96 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | AC090510.1-201 | ENST00000567456 | 425 nt | TSL 3 BASIC | 2.35 | □□□□□ -2.03 | | |
| PTPN2 | P17706 | DEFB122-202 | ENST00000569013 | 197 nt | BASIC | 2.35 | □□□□□ -2.03 | | |