Protein–RNA interactions for Protein: P13612

ITGA4, Integrin alpha-4, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4P13612 Y_RNA.597-201ENST00000410463 100 ntBASIC3.42□□□□□ -1.86
ITGA4P13612 RNA5SP504-201ENST00000410676 117 ntBASIC3.42□□□□□ -1.86
ITGA4P13612 AC097463.2-201ENST00000421074 142 ntBASIC3.42□□□□□ -1.86
ITGA4P13612 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.42□□□□□ -1.86
ITGA4P13612 AC008885.1-201ENST00000514930 301 ntBASIC3.42□□□□□ -1.86
ITGA4P13612 RNU2-44P-201ENST00000516795 194 ntBASIC3.42□□□□□ -1.86
ITGA4P13612 AC022559.1-201ENST00000520905 205 ntBASIC3.42□□□□□ -1.86
ITGA4P13612 AC073349.3-201ENST00000617616 186 ntBASIC3.42□□□□□ -1.86
ITGA4P13612 AC068205.3-201ENST00000636385 468 ntBASIC3.42□□□□□ -1.86
ITGA4P13612 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
ITGA4P13612 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
ITGA4P13612 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.41□□□□□ -1.86
ITGA4P13612 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
ITGA4P13612 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
ITGA4P13612 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
ITGA4P13612 RNU6-545P-201ENST00000362681 104 ntBASIC3.41□□□□□ -1.86
ITGA4P13612 RNU6-454P-201ENST00000364292 107 ntBASIC3.41□□□□□ -1.86
ITGA4P13612 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
ITGA4P13612 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.41□□□□□ -1.86
ITGA4P13612 EIF4EP4-201ENST00000424916 578 ntBASIC3.41□□□□□ -1.86
ITGA4P13612 SCARNA13-201ENST00000516672 275 ntBASIC3.41□□□□□ -1.86
ITGA4P13612 RNU6-861P-201ENST00000516745 106 ntBASIC3.41□□□□□ -1.86
ITGA4P13612 RNU2-12P-201ENST00000517216 168 ntBASIC3.41□□□□□ -1.86
ITGA4P13612 AC245166.1-201ENST00000521012 253 ntBASIC3.41□□□□□ -1.86
ITGA4P13612 MIR622-201ENST00000638396 96 ntBASIC3.41□□□□□ -1.86
ITGA4P13612 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.41□□□□□ -1.86
ITGA4P13612 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
ITGA4P13612 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
ITGA4P13612 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
ITGA4P13612 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
ITGA4P13612 AL021368.2-201ENST00000606125 5352 ntBASIC3.4□□□□□ -1.86
ITGA4P13612 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
ITGA4P13612 RNU6-493P-201ENST00000391321 108 ntBASIC3.4□□□□□ -1.87
ITGA4P13612 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.4□□□□□ -1.87
ITGA4P13612 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC3.4□□□□□ -1.87
ITGA4P13612 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.4□□□□□ -1.87
ITGA4P13612 RPS29P26-201ENST00000477483 171 ntBASIC3.4□□□□□ -1.87
ITGA4P13612 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.4□□□□□ -1.87
ITGA4P13612 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.4□□□□□ -1.87
ITGA4P13612 RNA5SP217-201ENST00000515959 91 ntBASIC3.4□□□□□ -1.87
ITGA4P13612 MIR4765-201ENST00000585007 77 ntBASIC3.4□□□□□ -1.87
ITGA4P13612 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.4□□□□□ -1.87
ITGA4P13612 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.4□□□□□ -1.87
ITGA4P13612 AC006380.1-201ENST00000603598 186 ntBASIC3.4□□□□□ -1.87
ITGA4P13612 AL670379.2-201ENST00000604983 252 ntBASIC3.4□□□□□ -1.87
ITGA4P13612 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.4□□□□□ -1.87
ITGA4P13612 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
ITGA4P13612 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.39□□□□□ -1.87
ITGA4P13612 SNORA71.1-201ENST00000364523 117 ntBASIC3.39□□□□□ -1.87
ITGA4P13612 RNU6-923P-201ENST00000364753 107 ntBASIC3.39□□□□□ -1.87
ITGA4P13612 Y_RNA.329-201ENST00000365209 107 ntBASIC3.39□□□□□ -1.87
ITGA4P13612 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.39□□□□□ -1.87
ITGA4P13612 AC024067.1-201ENST00000426199 223 ntBASIC3.39□□□□□ -1.87
ITGA4P13612 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.39□□□□□ -1.87
ITGA4P13612 AP001486.1-201ENST00000463339 476 ntBASIC3.39□□□□□ -1.87
ITGA4P13612 MRPS36P2-201ENST00000512569 299 ntBASIC3.39□□□□□ -1.87
ITGA4P13612 RNY3P16-201ENST00000516338 101 ntBASIC3.39□□□□□ -1.87
ITGA4P13612 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.39□□□□□ -1.87
ITGA4P13612 AC103810.1-201ENST00000579873 453 ntBASIC3.39□□□□□ -1.87
ITGA4P13612 RPL30P11-203ENST00000598995 310 ntBASIC3.39□□□□□ -1.87
ITGA4P13612 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.39□□□□□ -1.87
ITGA4P13612 AC002064.3-201ENST00000623448 346 ntBASIC3.39□□□□□ -1.87
ITGA4P13612 AC110079.1-202ENST00000635213 138 ntBASIC3.39□□□□□ -1.87
ITGA4P13612 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
ITGA4P13612 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
ITGA4P13612 AC093831.2-201ENST00000624393 3427 ntBASIC3.38□□□□□ -1.87
ITGA4P13612 RNU6-774P-201ENST00000363238 107 ntBASIC3.38□□□□□ -1.87
ITGA4P13612 RNU6-324P-201ENST00000363957 106 ntBASIC3.38□□□□□ -1.87
ITGA4P13612 Y_RNA.464-201ENST00000384282 110 ntBASIC3.38□□□□□ -1.87
ITGA4P13612 RPL21P3-201ENST00000395517 478 ntBASIC3.38□□□□□ -1.87
ITGA4P13612 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.38□□□□□ -1.87
ITGA4P13612 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.38□□□□□ -1.87
ITGA4P13612 AC146507.2-201ENST00000460608 476 ntBASIC3.38□□□□□ -1.87
ITGA4P13612 RN7SL75P-201ENST00000461926 281 ntBASIC3.38□□□□□ -1.87
ITGA4P13612 AL049873.1-201ENST00000480540 376 ntBASIC3.38□□□□□ -1.87
ITGA4P13612 AC074198.2-201ENST00000508153 258 ntBASIC3.38□□□□□ -1.87
ITGA4P13612 SCARNA17.1-201ENST00000516211 143 ntBASIC3.38□□□□□ -1.87
ITGA4P13612 SCARNA17.2-201ENST00000516334 143 ntBASIC3.38□□□□□ -1.87
ITGA4P13612 LARP7P3-201ENST00000579888 337 ntBASIC3.38□□□□□ -1.87
ITGA4P13612 AC072026.1-201ENST00000605023 201 ntBASIC3.38□□□□□ -1.87
ITGA4P13612 SCARNA17.4-201ENST00000614296 143 ntBASIC3.38□□□□□ -1.87
ITGA4P13612 UCA1.1-201ENST00000620952 75 ntBASIC3.38□□□□□ -1.87
ITGA4P13612 AC006386.2-201ENST00000624491 75 ntBASIC3.38□□□□□ -1.87
ITGA4P13612 AC012005.1-201ENST00000624575 75 ntBASIC3.38□□□□□ -1.87
ITGA4P13612 snoU18.1-201ENST00000629629 71 ntBASIC3.38□□□□□ -1.87
ITGA4P13612 U6.98-201ENST00000637157 84 ntBASIC3.38□□□□□ -1.87
ITGA4P13612 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
ITGA4P13612 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
ITGA4P13612 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.37□□□□□ -1.87
ITGA4P13612 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.37□□□□□ -1.87
ITGA4P13612 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
ITGA4P13612 Y_RNA.111-201ENST00000363248 100 ntBASIC3.37□□□□□ -1.87
ITGA4P13612 Y_RNA.308-201ENST00000365043 101 ntBASIC3.37□□□□□ -1.87
ITGA4P13612 RNU6-211P-201ENST00000384047 107 ntBASIC3.37□□□□□ -1.87
ITGA4P13612 SNORA44-201ENST00000384584 132 ntBASIC3.37□□□□□ -1.87
ITGA4P13612 U3.40-201ENST00000408706 208 ntBASIC3.37□□□□□ -1.87
ITGA4P13612 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3.37□□□□□ -1.87
ITGA4P13612 COTL1P1-201ENST00000422309 375 ntBASIC3.37□□□□□ -1.87
ITGA4P13612 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.37□□□□□ -1.87
ITGA4P13612 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 126 ms