Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 RPL37P6-201ENST00000460682 294 ntBASIC-0.62□□□□□ -2.51
APOBP04114 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC-0.62□□□□□ -2.51
APOBP04114 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC-0.62□□□□□ -2.51
APOBP04114 SNORD115-2-201ENST00000362842 82 ntBASIC-0.63□□□□□ -2.51
APOBP04114 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.63□□□□□ -2.51
APOBP04114 RNU6-1151P-201ENST00000384684 107 ntBASIC-0.63□□□□□ -2.51
APOBP04114 MIR660-201ENST00000385235 97 ntBASIC-0.63□□□□□ -2.51
APOBP04114 FCF1P10-201ENST00000407590 479 ntBASIC-0.63□□□□□ -2.51
APOBP04114 MIR1298-201ENST00000408783 112 ntBASIC-0.63□□□□□ -2.51
APOBP04114 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC-0.63□□□□□ -2.51
APOBP04114 MLLT10P1-201ENST00000418346 262 ntBASIC-0.63□□□□□ -2.51
APOBP04114 MTATP6P30-201ENST00000443540 664 ntBASIC-0.63□□□□□ -2.51
APOBP04114 USP9YP25-201ENST00000457708 443 ntBASIC-0.63□□□□□ -2.51
APOBP04114 RNA5SP290-201ENST00000517133 127 ntBASIC-0.63□□□□□ -2.51
APOBP04114 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-0.63□□□□□ -2.51
APOBP04114 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.63□□□□□ -2.51
APOBP04114 RNU6-47P-201ENST00000383866 107 ntBASIC-0.63□□□□□ -2.51
APOBP04114 RPL31P54-201ENST00000429803 370 ntBASIC-0.63□□□□□ -2.51
APOBP04114 AC109445.1-201ENST00000512356 383 ntBASIC-0.63□□□□□ -2.51
APOBP04114 snoZ40.1-201ENST00000364540 72 ntBASIC-0.63□□□□□ -2.51
APOBP04114 SNORA4.2-201ENST00000365313 147 ntBASIC-0.63□□□□□ -2.51
APOBP04114 RNA5SP467-201ENST00000391274 118 ntBASIC-0.63□□□□□ -2.51
APOBP04114 FGFR1OP2P1-201ENST00000395943 500 ntBASIC-0.63□□□□□ -2.51
APOBP04114 EXOSC3P1-201ENST00000448649 500 ntBASIC-0.63□□□□□ -2.51
APOBP04114 AC091959.1-201ENST00000495857 238 ntBASIC-0.63□□□□□ -2.51
APOBP04114 MTND2P33-201ENST00000506452 1031 ntBASIC-0.63□□□□□ -2.51
APOBP04114 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC-0.63□□□□□ -2.51
APOBP04114 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC-0.63□□□□□ -2.51
APOBP04114 FGF7P1-201ENST00000582820 288 ntBASIC-0.63□□□□□ -2.51
APOBP04114 MIR186-201ENST00000384988 86 ntBASIC-0.64□□□□□ -2.51
APOBP04114 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC-0.64□□□□□ -2.51
APOBP04114 AC007327.1-201ENST00000447461 264 ntBASIC-0.64□□□□□ -2.51
APOBP04114 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC-0.64□□□□□ -2.51
APOBP04114 RNU6-390P-201ENST00000516259 103 ntBASIC-0.64□□□□□ -2.51
APOBP04114 AC115990.1-201ENST00000526957 301 ntBASIC-0.64□□□□□ -2.51
APOBP04114 AC140658.3-201ENST00000567603 271 ntBASIC-0.64□□□□□ -2.51
APOBP04114 MIR548AD-201ENST00000584780 82 ntBASIC-0.64□□□□□ -2.51
APOBP04114 AC135803.1-201ENST00000608748 565 ntBASIC-0.64□□□□□ -2.51
APOBP04114 MIR148A-201ENST00000362215 68 ntBASIC-0.64□□□□□ -2.51
APOBP04114 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC-0.64□□□□□ -2.51
APOBP04114 MTCO3P28-201ENST00000513351 515 ntBASIC-0.64□□□□□ -2.51
APOBP04114 RNU6-1247P-201ENST00000516622 98 ntBASIC-0.64□□□□□ -2.51
APOBP04114 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC-0.64□□□□□ -2.51
APOBP04114 MIR520G-201ENST00000385064 90 ntBASIC-0.64□□□□□ -2.51
APOBP04114 MIR520H-201ENST00000385126 88 ntBASIC-0.64□□□□□ -2.51
APOBP04114 MTCO2P23-201ENST00000425216 680 ntBASIC-0.64□□□□□ -2.51
APOBP04114 MTND1P14-201ENST00000427400 950 ntBASIC-0.64□□□□□ -2.51
APOBP04114 AC069271.1-201ENST00000445577 156 ntBASIC-0.64□□□□□ -2.51
APOBP04114 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC-0.64□□□□□ -2.51
APOBP04114 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC-0.64□□□□□ -2.51
APOBP04114 POLR3GP2-201ENST00000588366 668 ntBASIC-0.64□□□□□ -2.51
APOBP04114 MTCO1P5-201ENST00000433573 344 ntBASIC-0.64□□□□□ -2.51
APOBP04114 MTCO2P7-201ENST00000446518 666 ntBASIC-0.64□□□□□ -2.51
APOBP04114 RNA5SP66-201ENST00000517178 101 ntBASIC-0.64□□□□□ -2.51
APOBP04114 U7.6-201ENST00000610841 64 ntBASIC-0.64□□□□□ -2.51
APOBP04114 Y_RNA.332-201ENST00000365271 113 ntBASIC-0.65□□□□□ -2.51
APOBP04114 SNORD111-201ENST00000408139 94 ntBASIC-0.65□□□□□ -2.51
APOBP04114 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC-0.65□□□□□ -2.51
APOBP04114 AC093019.1-201ENST00000443135 252 ntBASIC-0.65□□□□□ -2.51
APOBP04114 FCF1P4-201ENST00000448326 183 ntBASIC-0.65□□□□□ -2.51
APOBP04114 HSFY5P-201ENST00000453726 309 ntBASIC-0.65□□□□□ -2.51
APOBP04114 RNU2-46P-201ENST00000517038 113 ntBASIC-0.65□□□□□ -2.51
APOBP04114 ELOCP32-201ENST00000548625 324 ntBASIC-0.65□□□□□ -2.51
APOBP04114 AC080078.2-201ENST00000603766 501 ntBASIC-0.65□□□□□ -2.51
APOBP04114 AL603758.1-201ENST00000618654 241 ntBASIC-0.65□□□□□ -2.51
APOBP04114 TTK-211ENST00000627129 240 ntTSL 5 BASIC-0.65□□□□□ -2.51
APOBP04114 AC093726.3-201ENST00000637588 150 ntBASIC-0.65□□□□□ -2.51
APOBP04114 SNORA26-201ENST00000391286 122 ntBASIC-0.65□□□□□ -2.51
APOBP04114 Y_RNA.597-201ENST00000410463 100 ntBASIC-0.65□□□□□ -2.51
APOBP04114 AKIRIN2P1-201ENST00000505898 352 ntBASIC-0.65□□□□□ -2.51
APOBP04114 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC-0.65□□□□□ -2.51
APOBP04114 AP001429.1-201ENST00000602568 530 ntBASIC-0.65□□□□□ -2.51
APOBP04114 AL513423.1-201ENST00000621695 132 ntBASIC-0.65□□□□□ -2.51
APOBP04114 AL603865.2-201ENST00000401679 213 ntBASIC-0.65□□□□□ -2.51
APOBP04114 RPP40P1-201ENST00000426762 456 ntBASIC-0.65□□□□□ -2.51
APOBP04114 snoU13.14-201ENST00000459372 104 ntBASIC-0.65□□□□□ -2.51
APOBP04114 AC010424.1-201ENST00000506336 297 ntBASIC-0.65□□□□□ -2.51
APOBP04114 UTP23-205ENST00000520733 369 ntTSL 3 BASIC-0.65□□□□□ -2.51
APOBP04114 AC090049.2-201ENST00000550377 109 ntBASIC-0.65□□□□□ -2.51
APOBP04114 SNORD38B-202ENST00000625943 69 ntBASIC-0.65□□□□□ -2.51
APOBP04114 MIR499B-201ENST00000636498 73 ntBASIC-0.65□□□□□ -2.51
APOBP04114 ZNF971P-201ENST00000562068 1249 ntBASIC-0.65□□□□□ -2.51
APOBP04114 RNU6-199P-201ENST00000362954 107 ntBASIC-0.66□□□□□ -2.51
APOBP04114 Y_RNA.326-201ENST00000365176 113 ntBASIC-0.66□□□□□ -2.51
APOBP04114 SNORA26.3-201ENST00000391119 136 ntBASIC-0.66□□□□□ -2.51
APOBP04114 RNU6-57P-201ENST00000411348 103 ntBASIC-0.66□□□□□ -2.51
APOBP04114 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC-0.66□□□□□ -2.51
APOBP04114 NDUFA4P2-201ENST00000489989 244 ntBASIC-0.66□□□□□ -2.51
APOBP04114 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC-0.66□□□□□ -2.51
APOBP04114 AC132825.6-201ENST00000638861 357 ntBASIC-0.66□□□□□ -2.51
APOBP04114 RNU6-862P-201ENST00000362804 105 ntBASIC-0.66□□□□□ -2.52
APOBP04114 RNA5SP48-201ENST00000363969 126 ntBASIC-0.66□□□□□ -2.52
APOBP04114 SNORD114-6-201ENST00000364393 72 ntBASIC-0.66□□□□□ -2.52
APOBP04114 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC-0.66□□□□□ -2.52
APOBP04114 FO393419.3-201ENST00000428741 282 ntBASIC-0.66□□□□□ -2.52
APOBP04114 AC073910.1-201ENST00000445047 438 ntBASIC-0.66□□□□□ -2.52
APOBP04114 AC023827.1-201ENST00000569247 97 ntBASIC-0.66□□□□□ -2.52
APOBP04114 MIR5591-201ENST00000578248 65 ntBASIC-0.66□□□□□ -2.52
APOBP04114 MIR5695-201ENST00000579717 85 ntBASIC-0.66□□□□□ -2.52
APOBP04114 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC-0.66□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms