Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 AC084290.1-201ENST00000434995 374 ntBASIC0.28□□□□□ -2.37
SNRNP200O75643 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC0.28□□□□□ -2.37
SNRNP200O75643 RPL39P39-201ENST00000455840 151 ntBASIC0.28□□□□□ -2.37
SNRNP200O75643 LINC01399-202ENST00000458450 244 ntBASIC0.28□□□□□ -2.37
SNRNP200O75643 RNU7-138P-201ENST00000459479 64 ntBASIC0.28□□□□□ -2.37
SNRNP200O75643 AC002350.1-201ENST00000490759 375 ntBASIC0.28□□□□□ -2.37
SNRNP200O75643 AC079382.1-201ENST00000493346 557 ntBASIC0.28□□□□□ -2.37
SNRNP200O75643 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.28□□□□□ -2.37
SNRNP200O75643 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.28□□□□□ -2.37
SNRNP200O75643 MTND3P5-201ENST00000512798 333 ntBASIC0.28□□□□□ -2.37
SNRNP200O75643 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC0.28□□□□□ -2.37
SNRNP200O75643 RNU4-57P-201ENST00000515980 135 ntBASIC0.28□□□□□ -2.37
SNRNP200O75643 RNU6-496P-201ENST00000516145 99 ntBASIC0.28□□□□□ -2.37
SNRNP200O75643 RNU6-917P-201ENST00000516294 104 ntBASIC0.28□□□□□ -2.37
SNRNP200O75643 MTND4LP18-201ENST00000526864 291 ntBASIC0.28□□□□□ -2.37
SNRNP200O75643 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC0.28□□□□□ -2.37
SNRNP200O75643 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC0.28□□□□□ -2.37
SNRNP200O75643 FGF7P1-201ENST00000582820 288 ntBASIC0.28□□□□□ -2.37
SNRNP200O75643 AL359999.1-201ENST00000604513 294 ntBASIC0.28□□□□□ -2.37
SNRNP200O75643 AP001836.1-201ENST00000604675 523 ntBASIC0.28□□□□□ -2.37
SNRNP200O75643 AP001596.2-201ENST00000608410 312 ntBASIC0.28□□□□□ -2.37
SNRNP200O75643 AL157392.4-201ENST00000609756 345 ntBASIC0.28□□□□□ -2.37
SNRNP200O75643 AC008250.2-201ENST00000615261 205 ntBASIC0.28□□□□□ -2.37
SNRNP200O75643 AL513423.1-201ENST00000621695 132 ntBASIC0.28□□□□□ -2.37
SNRNP200O75643 AC100810.6-201ENST00000638068 285 ntBASIC0.28□□□□□ -2.37
SNRNP200O75643 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.28□□□□□ -2.37
SNRNP200O75643 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.27□□□□□ -2.37
SNRNP200O75643 RNA5SP361-201ENST00000362686 118 ntBASIC0.27□□□□□ -2.37
SNRNP200O75643 Y_RNA.363-201ENST00000365529 113 ntBASIC0.27□□□□□ -2.37
SNRNP200O75643 MIR660-201ENST00000385235 97 ntBASIC0.27□□□□□ -2.37
SNRNP200O75643 AC119618.1-201ENST00000434191 222 ntBASIC0.27□□□□□ -2.37
SNRNP200O75643 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.27□□□□□ -2.37
SNRNP200O75643 AC009961.2-201ENST00000435771 251 ntBASIC0.27□□□□□ -2.37
SNRNP200O75643 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.27□□□□□ -2.37
SNRNP200O75643 MTATP6P14-201ENST00000455189 673 ntBASIC0.27□□□□□ -2.37
SNRNP200O75643 RNU7-90P-201ENST00000459216 62 ntBASIC0.27□□□□□ -2.37
SNRNP200O75643 SNORD42A-201ENST00000459584 64 ntBASIC0.27□□□□□ -2.37
SNRNP200O75643 RNU6-1041P-201ENST00000516254 102 ntBASIC0.27□□□□□ -2.37
SNRNP200O75643 AC069113.1-201ENST00000517763 267 ntBASIC0.27□□□□□ -2.37
SNRNP200O75643 AC106038.2-201ENST00000520706 568 ntBASIC0.27□□□□□ -2.37
SNRNP200O75643 AL356157.2-201ENST00000605122 111 ntBASIC0.27□□□□□ -2.37
SNRNP200O75643 7SK.10-201ENST00000621414 298 ntBASIC0.27□□□□□ -2.37
SNRNP200O75643 MIR924-201ENST00000638017 53 ntBASIC0.27□□□□□ -2.37
SNRNP200O75643 RNY4P16-201ENST00000364768 94 ntBASIC0.26□□□□□ -2.37
SNRNP200O75643 SNORD114-24-201ENST00000365029 72 ntBASIC0.26□□□□□ -2.37
SNRNP200O75643 RNU6-418P-201ENST00000384035 107 ntBASIC0.26□□□□□ -2.37
SNRNP200O75643 RNU6-434P-201ENST00000384376 107 ntBASIC0.26□□□□□ -2.37
SNRNP200O75643 SNORD116-13-201ENST00000384408 92 ntBASIC0.26□□□□□ -2.37
SNRNP200O75643 RNU6-809P-201ENST00000384461 107 ntBASIC0.26□□□□□ -2.37
SNRNP200O75643 RNU6-393P-201ENST00000384475 107 ntBASIC0.26□□□□□ -2.37
SNRNP200O75643 RNU6-110P-201ENST00000384508 104 ntBASIC0.26□□□□□ -2.37
SNRNP200O75643 AL355796.1-201ENST00000406706 323 ntBASIC0.26□□□□□ -2.37
SNRNP200O75643 RNU6-1186P-201ENST00000410429 97 ntBASIC0.26□□□□□ -2.37
SNRNP200O75643 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC0.26□□□□□ -2.37
SNRNP200O75643 C1DP2-201ENST00000418167 426 ntBASIC0.26□□□□□ -2.37
SNRNP200O75643 AL365184.2-201ENST00000431139 435 ntBASIC0.26□□□□□ -2.37
SNRNP200O75643 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC0.26□□□□□ -2.37
SNRNP200O75643 MTCO2P3-201ENST00000442543 421 ntBASIC0.26□□□□□ -2.37
SNRNP200O75643 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC0.26□□□□□ -2.37
SNRNP200O75643 C1DP4-201ENST00000455429 424 ntBASIC0.26□□□□□ -2.37
SNRNP200O75643 RNU7-14P-201ENST00000459331 62 ntBASIC0.26□□□□□ -2.37
SNRNP200O75643 U8.21-201ENST00000459536 136 ntBASIC0.26□□□□□ -2.37
SNRNP200O75643 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.26□□□□□ -2.37
SNRNP200O75643 AC097462.1-201ENST00000514125 324 ntBASIC0.26□□□□□ -2.37
SNRNP200O75643 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC0.26□□□□□ -2.37
SNRNP200O75643 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC0.26□□□□□ -2.37
SNRNP200O75643 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.26□□□□□ -2.37
SNRNP200O75643 AL078595.3-201ENST00000623815 1166 ntBASIC0.26□□□□□ -2.37
SNRNP200O75643 CASC19-280ENST00000642102 1351 ntBASIC0.26□□□□□ -2.37
SNRNP200O75643 RNU6-827P-201ENST00000365553 106 ntBASIC0.26□□□□□ -2.37
SNRNP200O75643 SNORA67.2-201ENST00000384300 149 ntBASIC0.26□□□□□ -2.37
SNRNP200O75643 RNU6-1026P-201ENST00000384465 108 ntBASIC0.26□□□□□ -2.37
SNRNP200O75643 RNU6-1031P-201ENST00000384773 107 ntBASIC0.26□□□□□ -2.37
SNRNP200O75643 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.26□□□□□ -2.37
SNRNP200O75643 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
SNRNP200O75643 RPS20P10-201ENST00000451209 253 ntBASIC0.26□□□□□ -2.37
SNRNP200O75643 AC109479.2-201ENST00000517842 174 ntBASIC0.26□□□□□ -2.37
SNRNP200O75643 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC0.26□□□□□ -2.37
SNRNP200O75643 MRPS36P4-201ENST00000534436 298 ntBASIC0.26□□□□□ -2.37
SNRNP200O75643 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC0.26□□□□□ -2.37
SNRNP200O75643 AC080013.3-201ENST00000606839 578 ntBASIC0.26□□□□□ -2.37
SNRNP200O75643 AL359075.3-201ENST00000613288 217 ntBASIC0.26□□□□□ -2.37
SNRNP200O75643 AL136221.1-201ENST00000621449 509 ntBASIC0.26□□□□□ -2.37
SNRNP200O75643 AC091925.1-201ENST00000623204 462 ntBASIC0.26□□□□□ -2.37
SNRNP200O75643 AL359697.1-201ENST00000624879 587 ntBASIC0.26□□□□□ -2.37
SNRNP200O75643 RNU6-501P-201ENST00000364072 100 ntBASIC0.25□□□□□ -2.37
SNRNP200O75643 RNU4-28P-201ENST00000364739 141 ntBASIC0.25□□□□□ -2.37
SNRNP200O75643 RNU6-1335P-201ENST00000365426 107 ntBASIC0.25□□□□□ -2.37
SNRNP200O75643 RNU6-975P-201ENST00000384296 105 ntBASIC0.25□□□□□ -2.37
SNRNP200O75643 MRPL42P2-201ENST00000403169 426 ntBASIC0.25□□□□□ -2.37
SNRNP200O75643 Y_RNA.608-201ENST00000410647 95 ntBASIC0.25□□□□□ -2.37
SNRNP200O75643 MTCO2P34-201ENST00000421994 607 ntBASIC0.25□□□□□ -2.37
SNRNP200O75643 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC0.25□□□□□ -2.37
SNRNP200O75643 AC074290.1-201ENST00000448883 135 ntBASIC0.25□□□□□ -2.37
SNRNP200O75643 AC016717.1-201ENST00000448918 286 ntBASIC0.25□□□□□ -2.37
SNRNP200O75643 TPT1P7-201ENST00000458300 517 ntBASIC0.25□□□□□ -2.37
SNRNP200O75643 SNRPGP7-201ENST00000469016 106 ntBASIC0.25□□□□□ -2.37
SNRNP200O75643 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.25□□□□□ -2.37
SNRNP200O75643 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC0.25□□□□□ -2.37
SNRNP200O75643 RPL39P5-202ENST00000512505 151 ntBASIC0.25□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms