Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 Y_RNA.683-201ENST00000516508 93 ntBASIC2.81□□□□□ -1.96
VPS4BO75351 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.81□□□□□ -1.96
VPS4BO75351 DEFB131C-201ENST00000528817 165 ntBASIC2.81□□□□□ -1.96
VPS4BO75351 AC023157.2-201ENST00000540596 141 ntBASIC2.81□□□□□ -1.96
VPS4BO75351 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.81□□□□□ -1.96
VPS4BO75351 AC233702.2-202ENST00000562547 291 ntBASIC2.81□□□□□ -1.96
VPS4BO75351 AC062037.2-201ENST00000610137 73 ntBASIC2.81□□□□□ -1.96
VPS4BO75351 AL357075.2-201ENST00000614906 189 ntBASIC2.81□□□□□ -1.96
VPS4BO75351 AC011476.5-201ENST00000615594 130 ntBASIC2.81□□□□□ -1.96
VPS4BO75351 NAA50-211ENST00000630058 177 ntTSL 5 BASIC2.81□□□□□ -1.96
VPS4BO75351 MIR7515-201ENST00000637837 67 ntBASIC2.81□□□□□ -1.96
VPS4BO75351 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
VPS4BO75351 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.81□□□□□ -1.96
VPS4BO75351 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.8□□□□□ -1.96
VPS4BO75351 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
VPS4BO75351 snoU2_19.1-201ENST00000362361 80 ntBASIC2.8□□□□□ -1.96
VPS4BO75351 snoU2_19.2-201ENST00000363024 80 ntBASIC2.8□□□□□ -1.96
VPS4BO75351 Y_RNA.143-201ENST00000363520 106 ntBASIC2.8□□□□□ -1.96
VPS4BO75351 Y_RNA.461-201ENST00000384263 103 ntBASIC2.8□□□□□ -1.96
VPS4BO75351 SNORA54-201ENST00000384281 123 ntBASIC2.8□□□□□ -1.96
VPS4BO75351 MIR1302-6-201ENST00000408466 90 ntBASIC2.8□□□□□ -1.96
VPS4BO75351 MIR320B2-201ENST00000408479 138 ntBASIC2.8□□□□□ -1.96
VPS4BO75351 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.8□□□□□ -1.96
VPS4BO75351 RPL21P38-201ENST00000418090 167 ntBASIC2.8□□□□□ -1.96
VPS4BO75351 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.8□□□□□ -1.96
VPS4BO75351 AC139712.2-201ENST00000424302 339 ntBASIC2.8□□□□□ -1.96
VPS4BO75351 RPL30P4-201ENST00000429309 333 ntBASIC2.8□□□□□ -1.96
VPS4BO75351 AC105272.1-201ENST00000438604 198 ntBASIC2.8□□□□□ -1.96
VPS4BO75351 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.8□□□□□ -1.96
VPS4BO75351 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.8□□□□□ -1.96
VPS4BO75351 AC091179.3-201ENST00000474761 144 ntBASIC2.8□□□□□ -1.96
VPS4BO75351 AC083906.5-201ENST00000503722 328 ntBASIC2.8□□□□□ -1.96
VPS4BO75351 YWHAEP4-201ENST00000505390 198 ntBASIC2.8□□□□□ -1.96
VPS4BO75351 SNORA40.9-201ENST00000515895 93 ntBASIC2.8□□□□□ -1.96
VPS4BO75351 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.8□□□□□ -1.96
VPS4BO75351 MIR3605-201ENST00000583214 100 ntBASIC2.8□□□□□ -1.96
VPS4BO75351 RPL17P51-201ENST00000605218 238 ntBASIC2.8□□□□□ -1.96
VPS4BO75351 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.8□□□□□ -1.96
VPS4BO75351 MIR376A1-201ENST00000616574 68 ntBASIC2.8□□□□□ -1.96
VPS4BO75351 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.8□□□□□ -1.96
VPS4BO75351 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
VPS4BO75351 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.8□□□□□ -1.96
VPS4BO75351 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
VPS4BO75351 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
VPS4BO75351 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
VPS4BO75351 AC096644.4-201ENST00000563417 2912 ntBASIC2.79□□□□□ -1.96
VPS4BO75351 MTND5P35-201ENST00000557537 1720 ntBASIC2.79□□□□□ -1.96
VPS4BO75351 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
VPS4BO75351 Y_RNA.179-201ENST00000363844 90 ntBASIC2.79□□□□□ -1.96
VPS4BO75351 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
VPS4BO75351 SNORD21-201ENST00000383953 95 ntBASIC2.79□□□□□ -1.96
VPS4BO75351 RNU6-793P-201ENST00000384233 104 ntBASIC2.79□□□□□ -1.96
VPS4BO75351 Y_RNA.483-201ENST00000384380 101 ntBASIC2.79□□□□□ -1.96
VPS4BO75351 RNU6-851P-201ENST00000384565 107 ntBASIC2.79□□□□□ -1.96
VPS4BO75351 MIR181A2-201ENST00000384863 110 ntBASIC2.79□□□□□ -1.96
VPS4BO75351 MIR549A-201ENST00000385268 96 ntBASIC2.79□□□□□ -1.96
VPS4BO75351 Y_RNA.581-201ENST00000391017 97 ntBASIC2.79□□□□□ -1.96
VPS4BO75351 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
VPS4BO75351 Y_RNA.595-201ENST00000410403 105 ntBASIC2.79□□□□□ -1.96
VPS4BO75351 AC004866.1-201ENST00000411748 78 ntBASIC2.79□□□□□ -1.96
VPS4BO75351 AC005002.2-201ENST00000438228 269 ntBASIC2.79□□□□□ -1.96
VPS4BO75351 SNORD127-201ENST00000458892 86 ntBASIC2.79□□□□□ -1.96
VPS4BO75351 AC080013.2-201ENST00000460866 323 ntBASIC2.79□□□□□ -1.96
VPS4BO75351 AC098869.1-201ENST00000481627 292 ntBASIC2.79□□□□□ -1.96
VPS4BO75351 RPS23P5-201ENST00000495419 428 ntBASIC2.79□□□□□ -1.96
VPS4BO75351 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.79□□□□□ -1.96
VPS4BO75351 SCGB1D5P-201ENST00000515134 247 ntBASIC2.79□□□□□ -1.96
VPS4BO75351 RNA5SP76-201ENST00000516277 87 ntBASIC2.79□□□□□ -1.96
VPS4BO75351 RNU6-344P-201ENST00000516635 111 ntBASIC2.79□□□□□ -1.96
VPS4BO75351 SCARNA3-201ENST00000517097 143 ntBASIC2.79□□□□□ -1.96
VPS4BO75351 AK6P2-201ENST00000549020 471 ntBASIC2.79□□□□□ -1.96
VPS4BO75351 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.79□□□□□ -1.96
VPS4BO75351 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC2.79□□□□□ -1.96
VPS4BO75351 AL713866.2-201ENST00000603579 219 ntBASIC2.79□□□□□ -1.96
VPS4BO75351 MZT1P2-201ENST00000604387 248 ntBASIC2.79□□□□□ -1.96
VPS4BO75351 TCL6_2.1-201ENST00000615162 119 ntBASIC2.79□□□□□ -1.96
VPS4BO75351 AC005562.2-201ENST00000618264 111 ntBASIC2.79□□□□□ -1.96
VPS4BO75351 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.79□□□□□ -1.96
VPS4BO75351 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
VPS4BO75351 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
VPS4BO75351 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.79□□□□□ -1.96
VPS4BO75351 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.79□□□□□ -1.96
VPS4BO75351 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.78□□□□□ -1.96
VPS4BO75351 Z82195.2-201ENST00000612348 18351 ntBASIC2.78□□□□□ -1.96
VPS4BO75351 Y_RNA.84-201ENST00000363011 104 ntBASIC2.78□□□□□ -1.96
VPS4BO75351 RNU6-961P-201ENST00000363893 105 ntBASIC2.78□□□□□ -1.96
VPS4BO75351 SNORD56.5-201ENST00000364281 72 ntBASIC2.78□□□□□ -1.96
VPS4BO75351 Y_RNA.288-201ENST00000364854 92 ntBASIC2.78□□□□□ -1.96
VPS4BO75351 SNORA18.3-201ENST00000384122 132 ntBASIC2.78□□□□□ -1.96
VPS4BO75351 Y_RNA.562-201ENST00000384695 113 ntBASIC2.78□□□□□ -1.96
VPS4BO75351 RNU6-1203P-201ENST00000410703 110 ntBASIC2.78□□□□□ -1.96
VPS4BO75351 RPL19P1-201ENST00000411635 428 ntBASIC2.78□□□□□ -1.96
VPS4BO75351 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.78□□□□□ -1.96
VPS4BO75351 AC063976.3-201ENST00000426849 329 ntBASIC2.78□□□□□ -1.96
VPS4BO75351 ARL5AP4-201ENST00000430731 512 ntBASIC2.78□□□□□ -1.96
VPS4BO75351 AL121890.1-201ENST00000435457 205 ntBASIC2.78□□□□□ -1.96
VPS4BO75351 UBBP3-201ENST00000445497 241 ntBASIC2.78□□□□□ -1.96
VPS4BO75351 U6.104-201ENST00000637979 90 ntBASIC2.78□□□□□ -1.96
VPS4BO75351 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.78□□□□□ -1.96
VPS4BO75351 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 179.5 ms