Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
LDB3O75112 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.4□□□□□ -2.03
LDB3O75112 AC092268.1-201ENST00000342691 405 ntBASIC2.4□□□□□ -2.03
LDB3O75112 SNORA20.1-201ENST00000364790 130 ntBASIC2.4□□□□□ -2.03
LDB3O75112 U3.13-201ENST00000364804 214 ntBASIC2.4□□□□□ -2.03
LDB3O75112 RNU6-338P-201ENST00000383888 105 ntBASIC2.4□□□□□ -2.03
LDB3O75112 U8.10-201ENST00000384260 133 ntBASIC2.4□□□□□ -2.03
LDB3O75112 Y_RNA.552-201ENST00000384665 112 ntBASIC2.4□□□□□ -2.03
LDB3O75112 MIR549A-201ENST00000385268 96 ntBASIC2.4□□□□□ -2.03
LDB3O75112 RNU2-64P-201ENST00000411315 191 ntBASIC2.4□□□□□ -2.03
LDB3O75112 AC097463.2-201ENST00000421074 142 ntBASIC2.4□□□□□ -2.03
LDB3O75112 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.4□□□□□ -2.03
LDB3O75112 EIF1P2-201ENST00000428233 350 ntBASIC2.4□□□□□ -2.03
LDB3O75112 Z98742.2-201ENST00000431564 187 ntBASIC2.4□□□□□ -2.03
LDB3O75112 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.4□□□□□ -2.03
LDB3O75112 AC244670.1-201ENST00000436879 112 ntBASIC2.4□□□□□ -2.03
LDB3O75112 RPL39P40-201ENST00000445481 146 ntBASIC2.4□□□□□ -2.03
LDB3O75112 snoU13.6-201ENST00000458785 104 ntBASIC2.4□□□□□ -2.03
LDB3O75112 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.4□□□□□ -2.03
LDB3O75112 RNA5SP112-201ENST00000515937 99 ntBASIC2.4□□□□□ -2.03
LDB3O75112 SCARNA3-201ENST00000517097 143 ntBASIC2.4□□□□□ -2.03
LDB3O75112 AC093023.1-201ENST00000547375 507 ntBASIC2.4□□□□□ -2.03
LDB3O75112 AC027288.2-201ENST00000553028 243 ntBASIC2.4□□□□□ -2.03
LDB3O75112 MIR4643-201ENST00000577473 78 ntBASIC2.4□□□□□ -2.03
LDB3O75112 AC141273.2-201ENST00000618989 130 ntBASIC2.4□□□□□ -2.03
LDB3O75112 AC243829.7-201ENST00000633081 225 ntBASIC2.4□□□□□ -2.03
LDB3O75112 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
LDB3O75112 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.4□□□□□ -2.03
LDB3O75112 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
LDB3O75112 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
LDB3O75112 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
LDB3O75112 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.39□□□□□ -2.03
LDB3O75112 RNU6-529P-201ENST00000363383 104 ntBASIC2.39□□□□□ -2.03
LDB3O75112 Y_RNA.286-201ENST00000364813 102 ntBASIC2.39□□□□□ -2.03
LDB3O75112 Y_RNA.439-201ENST00000384119 94 ntBASIC2.39□□□□□ -2.03
LDB3O75112 Y_RNA.504-201ENST00000384481 104 ntBASIC2.39□□□□□ -2.03
LDB3O75112 RNU1-57P-201ENST00000384491 166 ntBASIC2.39□□□□□ -2.03
LDB3O75112 Y_RNA.510-201ENST00000384511 114 ntBASIC2.39□□□□□ -2.03
LDB3O75112 Y_RNA.602-201ENST00000410535 92 ntBASIC2.39□□□□□ -2.03
LDB3O75112 SUMO1P3-201ENST00000439961 304 ntBASIC2.39□□□□□ -2.03
LDB3O75112 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.39□□□□□ -2.03
LDB3O75112 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.39□□□□□ -2.03
LDB3O75112 AL139109.1-201ENST00000455491 297 ntBASIC2.39□□□□□ -2.03
LDB3O75112 snoU13.14-201ENST00000459372 104 ntBASIC2.39□□□□□ -2.03
LDB3O75112 AC023141.11-201ENST00000508864 202 ntBASIC2.39□□□□□ -2.03
LDB3O75112 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.39□□□□□ -2.03
LDB3O75112 RNU6-138P-201ENST00000515952 107 ntBASIC2.39□□□□□ -2.03
LDB3O75112 MIR3199-1-201ENST00000582434 88 ntBASIC2.39□□□□□ -2.03
LDB3O75112 AL078605.1-201ENST00000603529 500 ntBASIC2.39□□□□□ -2.03
LDB3O75112 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.39□□□□□ -2.03
LDB3O75112 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
LDB3O75112 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
LDB3O75112 Y_RNA.20-201ENST00000362479 113 ntBASIC2.38□□□□□ -2.03
LDB3O75112 RNU6-486P-201ENST00000363116 107 ntBASIC2.38□□□□□ -2.03
LDB3O75112 RNA5SP68-201ENST00000363885 119 ntBASIC2.38□□□□□ -2.03
LDB3O75112 MIR10B-201ENST00000385011 110 ntBASIC2.38□□□□□ -2.03
LDB3O75112 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
LDB3O75112 AL603910.2-201ENST00000407268 136 ntBASIC2.38□□□□□ -2.03
LDB3O75112 RNU6-1001P-201ENST00000411265 100 ntBASIC2.38□□□□□ -2.03
LDB3O75112 AL590135.1-201ENST00000422215 156 ntBASIC2.38□□□□□ -2.03
LDB3O75112 WARS2P1-201ENST00000429678 537 ntBASIC2.38□□□□□ -2.03
LDB3O75112 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.38□□□□□ -2.03
LDB3O75112 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.38□□□□□ -2.03
LDB3O75112 GPM6BP3-201ENST00000442797 145 ntBASIC2.38□□□□□ -2.03
LDB3O75112 AC016700.2-201ENST00000446011 156 ntBASIC2.38□□□□□ -2.03
LDB3O75112 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.38□□□□□ -2.03
LDB3O75112 HSPE1P25-201ENST00000455484 251 ntBASIC2.38□□□□□ -2.03
LDB3O75112 RPS27AP9-201ENST00000477681 438 ntBASIC2.38□□□□□ -2.03
LDB3O75112 AIG1P1-201ENST00000503376 148 ntBASIC2.38□□□□□ -2.03
LDB3O75112 RNU6-1338P-201ENST00000516328 91 ntBASIC2.38□□□□□ -2.03
LDB3O75112 RPPH1-2P-201ENST00000516688 293 ntBASIC2.38□□□□□ -2.03
LDB3O75112 SCARNA24.2-201ENST00000516968 130 ntBASIC2.38□□□□□ -2.03
LDB3O75112 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.38□□□□□ -2.03
LDB3O75112 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.38□□□□□ -2.03
LDB3O75112 AC006023.1-201ENST00000603944 259 ntBASIC2.38□□□□□ -2.03
LDB3O75112 AL359198.2-201ENST00000611836 194 ntBASIC2.38□□□□□ -2.03
LDB3O75112 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.38□□□□□ -2.03
LDB3O75112 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.38□□□□□ -2.03
LDB3O75112 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
LDB3O75112 LINC02555-201ENST00000563933 1951 ntBASIC2.38□□□□□ -2.03
LDB3O75112 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
LDB3O75112 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.37□□□□□ -2.03
LDB3O75112 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.37□□□□□ -2.03
LDB3O75112 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.37□□□□□ -2.03
LDB3O75112 AL136360.1-201ENST00000503377 1900 ntBASIC2.37□□□□□ -2.03
LDB3O75112 AC135776.4-201ENST00000624300 1904 ntBASIC2.37□□□□□ -2.03
LDB3O75112 AL391987.6-201ENST00000305671 199 ntBASIC2.37□□□□□ -2.03
LDB3O75112 SNORD113-8-201ENST00000363497 74 ntBASIC2.37□□□□□ -2.03
LDB3O75112 SNORD115-32-201ENST00000364079 82 ntBASIC2.37□□□□□ -2.03
LDB3O75112 RNU6-879P-201ENST00000364328 108 ntBASIC2.37□□□□□ -2.03
LDB3O75112 Y_RNA.277-201ENST00000364754 102 ntBASIC2.37□□□□□ -2.03
LDB3O75112 Y_RNA.416-201ENST00000384014 113 ntBASIC2.37□□□□□ -2.03
LDB3O75112 Y_RNA.462-201ENST00000384268 102 ntBASIC2.37□□□□□ -2.03
LDB3O75112 MIR186-201ENST00000384988 86 ntBASIC2.37□□□□□ -2.03
LDB3O75112 MIR218-1-201ENST00000384999 110 ntBASIC2.37□□□□□ -2.03
LDB3O75112 RNU6-220P-201ENST00000390919 107 ntBASIC2.37□□□□□ -2.03
LDB3O75112 MRPL35P1-201ENST00000404272 572 ntBASIC2.37□□□□□ -2.03
LDB3O75112 RNU4-30P-201ENST00000410245 143 ntBASIC2.37□□□□□ -2.03
LDB3O75112 AC104389.3-201ENST00000445629 235 ntBASIC2.37□□□□□ -2.03
LDB3O75112 AC080013.2-201ENST00000460866 323 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms