Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 AL356575.1-201ENST00000603008 283 ntBASIC3.29□□□□□ -1.88
TRIM13O60858 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.29□□□□□ -1.88
TRIM13O60858 U6.95-201ENST00000636931 70 ntBASIC3.29□□□□□ -1.88
TRIM13O60858 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
TRIM13O60858 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
TRIM13O60858 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.28□□□□□ -1.88
TRIM13O60858 MIR148B-201ENST00000362252 99 ntBASIC3.28□□□□□ -1.88
TRIM13O60858 RNU1-62P-201ENST00000362599 164 ntBASIC3.28□□□□□ -1.88
TRIM13O60858 RNU6-235P-201ENST00000362644 107 ntBASIC3.28□□□□□ -1.88
TRIM13O60858 RNU6-727P-201ENST00000363592 107 ntBASIC3.28□□□□□ -1.88
TRIM13O60858 RNU6-1264P-201ENST00000383891 107 ntBASIC3.28□□□□□ -1.88
TRIM13O60858 MIR549A-201ENST00000385268 96 ntBASIC3.28□□□□□ -1.88
TRIM13O60858 MIR1302-4-201ENST00000408701 150 ntBASIC3.28□□□□□ -1.88
TRIM13O60858 RNU6-588P-201ENST00000410281 105 ntBASIC3.28□□□□□ -1.88
TRIM13O60858 AIMP1P2-201ENST00000425294 312 ntBASIC3.28□□□□□ -1.88
TRIM13O60858 CST9LP2-201ENST00000437612 320 ntBASIC3.28□□□□□ -1.88
TRIM13O60858 RPS27P1-201ENST00000450552 247 ntBASIC3.28□□□□□ -1.88
TRIM13O60858 AC009220.1-201ENST00000451614 275 ntBASIC3.28□□□□□ -1.88
TRIM13O60858 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC3.28□□□□□ -1.88
TRIM13O60858 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.28□□□□□ -1.88
TRIM13O60858 RNA5SP217-201ENST00000515959 91 ntBASIC3.28□□□□□ -1.88
TRIM13O60858 RNU1-143P-201ENST00000516296 146 ntBASIC3.28□□□□□ -1.88
TRIM13O60858 SNORA31.23-201ENST00000517219 133 ntBASIC3.28□□□□□ -1.88
TRIM13O60858 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.28□□□□□ -1.88
TRIM13O60858 NDUFA5P6-201ENST00000542110 379 ntBASIC3.28□□□□□ -1.88
TRIM13O60858 U1.23-201ENST00000610293 146 ntBASIC3.28□□□□□ -1.88
TRIM13O60858 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.28□□□□□ -1.88
TRIM13O60858 RNU1-68P-201ENST00000615382 146 ntBASIC3.28□□□□□ -1.88
TRIM13O60858 U1.39-201ENST00000621562 146 ntBASIC3.28□□□□□ -1.88
TRIM13O60858 AC012640.5-201ENST00000623897 319 ntBASIC3.28□□□□□ -1.88
TRIM13O60858 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
TRIM13O60858 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.28□□□□□ -1.88
TRIM13O60858 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
TRIM13O60858 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.27□□□□□ -1.89
TRIM13O60858 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.27□□□□□ -1.89
TRIM13O60858 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.27□□□□□ -1.89
TRIM13O60858 MIR141-201ENST00000384975 95 ntBASIC3.27□□□□□ -1.89
TRIM13O60858 SNORA75.5-201ENST00000391291 81 ntBASIC3.27□□□□□ -1.89
TRIM13O60858 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC3.27□□□□□ -1.89
TRIM13O60858 AP002884.2-201ENST00000471647 395 ntBASIC3.27□□□□□ -1.89
TRIM13O60858 RPL23AP70-201ENST00000483361 460 ntBASIC3.27□□□□□ -1.89
TRIM13O60858 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.27□□□□□ -1.89
TRIM13O60858 RNU6-561P-201ENST00000516222 102 ntBASIC3.27□□□□□ -1.89
TRIM13O60858 SCARNA20.6-201ENST00000517251 106 ntBASIC3.27□□□□□ -1.89
TRIM13O60858 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.27□□□□□ -1.89
TRIM13O60858 MIR5688-201ENST00000580619 83 ntBASIC3.27□□□□□ -1.89
TRIM13O60858 HSPE1P7-201ENST00000604681 321 ntBASIC3.27□□□□□ -1.89
TRIM13O60858 SNORA51-201ENST00000606420 132 ntBASIC3.27□□□□□ -1.89
TRIM13O60858 uc_338.1-201ENST00000612113 180 ntBASIC3.27□□□□□ -1.89
TRIM13O60858 AC039056.2-201ENST00000622261 511 ntBASIC3.27□□□□□ -1.89
TRIM13O60858 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.27□□□□□ -1.89
TRIM13O60858 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
TRIM13O60858 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
TRIM13O60858 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
TRIM13O60858 CENPCP1-201ENST00000533085 2578 ntBASIC3.27□□□□□ -1.89
TRIM13O60858 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
TRIM13O60858 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.27□□□□□ -1.89
TRIM13O60858 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
TRIM13O60858 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
TRIM13O60858 RNA5SP295-201ENST00000362655 121 ntBASIC3.26□□□□□ -1.89
TRIM13O60858 SNORD115-30-201ENST00000364117 82 ntBASIC3.26□□□□□ -1.89
TRIM13O60858 SNORA70.2-201ENST00000364506 135 ntBASIC3.26□□□□□ -1.89
TRIM13O60858 Y_RNA.294-201ENST00000364916 102 ntBASIC3.26□□□□□ -1.89
TRIM13O60858 U8.7-201ENST00000364940 136 ntBASIC3.26□□□□□ -1.89
TRIM13O60858 Y_RNA.521-201ENST00000384560 114 ntBASIC3.26□□□□□ -1.89
TRIM13O60858 MT-TT-201ENST00000387460 66 ntBASIC3.26□□□□□ -1.89
TRIM13O60858 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
TRIM13O60858 RNU6-1228P-201ENST00000391014 107 ntBASIC3.26□□□□□ -1.89
TRIM13O60858 AL031003.1-201ENST00000404229 172 ntBASIC3.26□□□□□ -1.89
TRIM13O60858 RPL32P35-201ENST00000415214 394 ntBASIC3.26□□□□□ -1.89
TRIM13O60858 AC115115.1-201ENST00000449927 248 ntBASIC3.26□□□□□ -1.89
TRIM13O60858 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.26□□□□□ -1.89
TRIM13O60858 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.26□□□□□ -1.89
TRIM13O60858 CKS1BP7-201ENST00000522230 235 ntBASIC3.26□□□□□ -1.89
TRIM13O60858 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.26□□□□□ -1.89
TRIM13O60858 AL451007.1-201ENST00000595491 289 ntBASIC3.26□□□□□ -1.89
TRIM13O60858 AC108081.1-201ENST00000604358 221 ntBASIC3.26□□□□□ -1.89
TRIM13O60858 AL591926.4-201ENST00000616895 298 ntBASIC3.26□□□□□ -1.89
TRIM13O60858 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
TRIM13O60858 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
TRIM13O60858 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
TRIM13O60858 AL356274.2-201ENST00000624379 3752 ntBASIC3.26□□□□□ -1.89
TRIM13O60858 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
TRIM13O60858 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
TRIM13O60858 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
TRIM13O60858 Y_RNA.229-201ENST00000364347 113 ntBASIC3.25□□□□□ -1.89
TRIM13O60858 RNA5SP515-201ENST00000364570 118 ntBASIC3.25□□□□□ -1.89
TRIM13O60858 Y_RNA.280-201ENST00000364765 112 ntBASIC3.25□□□□□ -1.89
TRIM13O60858 Y_RNA.368-201ENST00000365547 113 ntBASIC3.25□□□□□ -1.89
TRIM13O60858 Y_RNA.369-201ENST00000365568 117 ntBASIC3.25□□□□□ -1.89
TRIM13O60858 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
TRIM13O60858 AL606845.1-201ENST00000404881 255 ntBASIC3.25□□□□□ -1.89
TRIM13O60858 FTH1P15-201ENST00000406984 280 ntBASIC3.25□□□□□ -1.89
TRIM13O60858 RNU6-710P-201ENST00000410424 105 ntBASIC3.25□□□□□ -1.89
TRIM13O60858 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.25□□□□□ -1.89
TRIM13O60858 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
TRIM13O60858 HMGN2P10-201ENST00000448085 265 ntBASIC3.25□□□□□ -1.89
TRIM13O60858 RPS29P20-201ENST00000489592 171 ntBASIC3.25□□□□□ -1.89
TRIM13O60858 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.25□□□□□ -1.89
TRIM13O60858 SNORD33.1-201ENST00000516213 88 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 233.5 ms