Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 RBMY2UP-201ENST00000453474 324 ntBASIC4.17□□□□□ -1.74
GFRA3O60609 SCARNA18B-201ENST00000458806 135 ntBASIC4.17□□□□□ -1.74
GFRA3O60609 U8.18-201ENST00000459285 133 ntBASIC4.17□□□□□ -1.74
GFRA3O60609 AC008155.2-201ENST00000464337 397 ntBASIC4.17□□□□□ -1.74
GFRA3O60609 RN7SL271P-201ENST00000487601 295 ntBASIC4.17□□□□□ -1.74
GFRA3O60609 RNU6-917P-201ENST00000516294 104 ntBASIC4.17□□□□□ -1.74
GFRA3O60609 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.17□□□□□ -1.74
GFRA3O60609 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.17□□□□□ -1.74
GFRA3O60609 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.17□□□□□ -1.74
GFRA3O60609 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.17□□□□□ -1.74
GFRA3O60609 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
GFRA3O60609 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
GFRA3O60609 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
GFRA3O60609 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
GFRA3O60609 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
GFRA3O60609 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
GFRA3O60609 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
GFRA3O60609 Y_RNA.40-201ENST00000362645 93 ntBASIC4.16□□□□□ -1.74
GFRA3O60609 Y_RNA.410-201ENST00000383992 113 ntBASIC4.16□□□□□ -1.74
GFRA3O60609 MIR519C-201ENST00000385053 87 ntBASIC4.16□□□□□ -1.74
GFRA3O60609 MIR325-201ENST00000385260 98 ntBASIC4.16□□□□□ -1.74
GFRA3O60609 RNU6-129P-201ENST00000391022 107 ntBASIC4.16□□□□□ -1.74
GFRA3O60609 HMGN2P30-201ENST00000423237 256 ntBASIC4.16□□□□□ -1.74
GFRA3O60609 AC115115.1-201ENST00000449927 248 ntBASIC4.16□□□□□ -1.74
GFRA3O60609 AC145146.1-201ENST00000496370 254 ntBASIC4.16□□□□□ -1.74
GFRA3O60609 CYCSP30-201ENST00000546447 172 ntBASIC4.16□□□□□ -1.74
GFRA3O60609 MIR4472-2-201ENST00000582069 67 ntBASIC4.16□□□□□ -1.74
GFRA3O60609 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.16□□□□□ -1.74
GFRA3O60609 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
GFRA3O60609 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
GFRA3O60609 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
GFRA3O60609 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
GFRA3O60609 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
GFRA3O60609 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
GFRA3O60609 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.16□□□□□ -1.74
GFRA3O60609 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.15□□□□□ -1.74
GFRA3O60609 AL365361.1-201ENST00000566942 3481 ntBASIC4.15□□□□□ -1.74
GFRA3O60609 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
GFRA3O60609 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
GFRA3O60609 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.74
GFRA3O60609 RNU4-32P-201ENST00000363404 141 ntBASIC4.15□□□□□ -1.75
GFRA3O60609 RNU6-629P-201ENST00000384061 103 ntBASIC4.15□□□□□ -1.75
GFRA3O60609 RNU6-217P-201ENST00000384164 104 ntBASIC4.15□□□□□ -1.75
GFRA3O60609 SNORD14D-201ENST00000384390 87 ntBASIC4.15□□□□□ -1.75
GFRA3O60609 Y_RNA.510-201ENST00000384511 114 ntBASIC4.15□□□□□ -1.75
GFRA3O60609 RAB6C-AS1-202ENST00000433431 123 ntBASIC4.15□□□□□ -1.75
GFRA3O60609 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC4.15□□□□□ -1.75
GFRA3O60609 SNORA70.16-201ENST00000516390 95 ntBASIC4.15□□□□□ -1.75
GFRA3O60609 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.15□□□□□ -1.75
GFRA3O60609 MIR3117-201ENST00000584034 78 ntBASIC4.15□□□□□ -1.75
GFRA3O60609 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.15□□□□□ -1.75
GFRA3O60609 AC107027.3-201ENST00000565095 3473 ntBASIC4.15□□□□□ -1.75
GFRA3O60609 AC107068.1-201ENST00000563286 4218 ntBASIC4.15□□□□□ -1.75
GFRA3O60609 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.15□□□□□ -1.75
GFRA3O60609 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.15□□□□□ -1.75
GFRA3O60609 ANKRD18EP-201ENST00000405487 2632 ntBASIC4.15□□□□□ -1.75
GFRA3O60609 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
GFRA3O60609 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.15□□□□□ -1.75
GFRA3O60609 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
GFRA3O60609 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.15□□□□□ -1.75
GFRA3O60609 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
GFRA3O60609 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
GFRA3O60609 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
GFRA3O60609 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
GFRA3O60609 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
GFRA3O60609 RNU6-1189P-201ENST00000383958 107 ntBASIC4.14□□□□□ -1.75
GFRA3O60609 AP000567.1-201ENST00000406413 156 ntBASIC4.14□□□□□ -1.75
GFRA3O60609 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.14□□□□□ -1.75
GFRA3O60609 AL161932.1-201ENST00000437408 146 ntBASIC4.14□□□□□ -1.75
GFRA3O60609 RNU7-57P-201ENST00000459540 60 ntBASIC4.14□□□□□ -1.75
GFRA3O60609 RN7SL323P-201ENST00000494712 295 ntBASIC4.14□□□□□ -1.75
GFRA3O60609 ACA59.2-201ENST00000517061 156 ntBASIC4.14□□□□□ -1.75
GFRA3O60609 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
GFRA3O60609 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
GFRA3O60609 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
GFRA3O60609 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
GFRA3O60609 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
GFRA3O60609 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
GFRA3O60609 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
GFRA3O60609 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
GFRA3O60609 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
GFRA3O60609 AC000403.1-201ENST00000613696 3585 ntBASIC4.13□□□□□ -1.75
GFRA3O60609 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
GFRA3O60609 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
GFRA3O60609 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
GFRA3O60609 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
GFRA3O60609 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC4.13□□□□□ -1.75
GFRA3O60609 RNU6-301P-201ENST00000384277 107 ntBASIC4.13□□□□□ -1.75
GFRA3O60609 AL512326.2-201ENST00000426359 151 ntBASIC4.13□□□□□ -1.75
GFRA3O60609 RNA5SP73-201ENST00000516744 108 ntBASIC4.13□□□□□ -1.75
GFRA3O60609 RNU7-70P-201ENST00000516941 66 ntBASIC4.13□□□□□ -1.75
GFRA3O60609 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC4.13□□□□□ -1.75
GFRA3O60609 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.13□□□□□ -1.75
GFRA3O60609 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.13□□□□□ -1.75
GFRA3O60609 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
GFRA3O60609 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
GFRA3O60609 AC010266.2-201ENST00000564741 3255 ntBASIC4.13□□□□□ -1.75
GFRA3O60609 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
GFRA3O60609 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
GFRA3O60609 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms